RNA–Protein interactions for RNA: ENST00000565256.1

SNHG20-203, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best)

Gene SNHG20, Length 1,234 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-203ENST00000565256 PBRM1Q86U86 1689 aa21.58■■□□□ 1.05
SNHG20-203ENST00000565256 ERICH3Q5RHP9 1530 aa21.58■■□□□ 1.04
SNHG20-203ENST00000565256 GOLGA3Q08378 1498 aa21.56■■□□□ 1.04
SNHG20-203ENST00000565256 CARMIL1Q5VZK9 1371 aa21.55■■□□□ 1.04
SNHG20-203ENST00000565256 RAPGEF2Q9Y4G8 1499 aa21.54■■□□□ 1.04
SNHG20-203ENST00000565256 CUL7Q14999 1698 aa21.53■■□□□ 1.04
SNHG20-203ENST00000565256 UBTFP17480 764 aaKnown RBP21.48■■□□□ 1.03
SNHG20-203ENST00000565256 GRIN2AQ12879 1464 aa21.45■■□□□ 1.03
SNHG20-203ENST00000565256 TNIKQ9UKE5 1360 aa21.45■■□□□ 1.02
SNHG20-203ENST00000565256 CEP170Q5SW79 1584 aa21.44■■□□□ 1.02
SNHG20-203ENST00000565256 NUP160Q12769 1436 aa21.43■■□□□ 1.02
SNHG20-203ENST00000565256 ADAMTS12P58397 1594 aa21.42■■□□□ 1.02
SNHG20-203ENST00000565256 FHAD1B1AJZ9 1412 aa21.41■■□□□ 1.02
SNHG20-203ENST00000565256 SHROOM2Q13796 1616 aa21.39■■□□□ 1.01
SNHG20-203ENST00000565256 KIF13AQ9H1H9 1805 aa21.36■■□□□ 1.01
SNHG20-203ENST00000565256 CEP162Q5TB80 1403 aa21.29■■□□□ 1
SNHG20-203ENST00000565256 CTTNBP2Q8WZ74 1663 aa21.27■■□□□ 1
SNHG20-203ENST00000565256 PRG4Q92954 1404 aaPredicted RBP21.23■□□□□ 0.99
SNHG20-203ENST00000565256 ABCC10Q5T3U5 1492 aa21.21■□□□□ 0.99
SNHG20-203ENST00000565256 CLIP1P30622 1438 aa21.2■□□□□ 0.98
SNHG20-203ENST00000565256 RANGAP1P46060 587 aaPredicted RBP21.19■□□□□ 0.98
SNHG20-203ENST00000565256 KDM4FA0A1W2PPD8 638 aa21.17■□□□□ 0.98
SNHG20-203ENST00000565256 FAM69CQ0P6D2 419 aa21.16■□□□□ 0.98
SNHG20-203ENST00000565256 DIP2BQ9P265 1576 aa21.15■□□□□ 0.98
SNHG20-203ENST00000565256 MAPKBP1O60336 1514 aa21.15■□□□□ 0.98
SNHG20-203ENST00000565256 JPH4Q96JJ6 628 aa21.13■□□□□ 0.97
SNHG20-203ENST00000565256 KIAA0586Q9BVV6 1533 aa21.12■□□□□ 0.97
SNHG20-203ENST00000565256 IQGAP2Q13576 1575 aa21.1■□□□□ 0.97
SNHG20-203ENST00000565256 ARHGAP35Q9NRY4 1499 aa21.09■□□□□ 0.97
SNHG20-203ENST00000565256 ADCY10Q96PN6 1610 aa21.09■□□□□ 0.97
SNHG20-203ENST00000565256 KDM6BO15054 1643 aa21.07■□□□□ 0.96
SNHG20-203ENST00000565256 ILDR1Q86SU0 546 aaPredicted RBP21.06■□□□□ 0.96
SNHG20-203ENST00000565256 EFCAB5A4FU69 1503 aa21.04■□□□□ 0.96
SNHG20-203ENST00000565256 SAMD9Q5K651 1589 aa21.02■□□□□ 0.96
SNHG20-203ENST00000565256 UGGT2Q9NYU1 1516 aa21.02■□□□□ 0.96
SNHG20-203ENST00000565256 NPM1P06748 294 aaKnown RBP eCLIP21■□□□□ 0.95
SNHG20-203ENST00000565256 P3H3Q8IVL6 736 aa20.99■□□□□ 0.95
SNHG20-203ENST00000565256 VPS8Q8N3P4 1428 aa20.97■□□□□ 0.95
SNHG20-203ENST00000565256 FHOD3Q2V2M9 1422 aa20.94■□□□□ 0.94
SNHG20-203ENST00000565256 DISP1Q96F81 1524 aa20.93■□□□□ 0.94
SNHG20-203ENST00000565256 TSPOAP1O95153 1857 aa20.92■□□□□ 0.94
SNHG20-203ENST00000565256 KIAA0556O60303 1618 aa20.9■□□□□ 0.94
SNHG20-203ENST00000565256 CARMIL2Q6F5E8 1435 aa20.86■□□□□ 0.93
SNHG20-203ENST00000565256 PPRC1Q5VV67 1664 aaKnown RBP20.85■□□□□ 0.93
SNHG20-203ENST00000565256 ADGRL1O94910 1474 aa20.84■□□□□ 0.93
SNHG20-203ENST00000565256 FMN1Q68DA7 1419 aa20.84■□□□□ 0.93
SNHG20-203ENST00000565256 PTPRGP23470 1445 aa20.79■□□□□ 0.92
SNHG20-203ENST00000565256 ABCC2Q92887 1545 aa20.79■□□□□ 0.92
SNHG20-203ENST00000565256 COL17A1Q9UMD9 1497 aaPredicted RBP20.79■□□□□ 0.92
SNHG20-203ENST00000565256 PCF11O94913 1555 aaKnown RBP20.79■□□□□ 0.92
SNHG20-203ENST00000565256 GLI2P10070 1586 aa20.78■□□□□ 0.92
SNHG20-203ENST00000565256 ASXL2Q76L83 1435 aa20.78■□□□□ 0.92
SNHG20-203ENST00000565256 CASKIN1Q8WXD9 1431 aa20.78■□□□□ 0.92
SNHG20-203ENST00000565256 FYCO1Q9BQS8 1478 aa20.75■□□□□ 0.91
SNHG20-203ENST00000565256 APLP2Q06481 763 aa20.74■□□□□ 0.91
SNHG20-203ENST00000565256 HECW2Q9P2P5 1572 aa20.74■□□□□ 0.91
SNHG20-203ENST00000565256 PLB1Q6P1J6 1458 aa20.74■□□□□ 0.91
SNHG20-203ENST00000565256 PPARGC1BQ86YN6 1023 aaKnown RBP20.73■□□□□ 0.91
SNHG20-203ENST00000565256 TTBK1Q5TCY1 1321 aaPredicted RBP20.73■□□□□ 0.91
SNHG20-203ENST00000565256 ATP1B4Q9UN42 357 aaPredicted RBP20.71■□□□□ 0.91
SNHG20-203ENST00000565256 UHRF1BP1LA0JNW5 1464 aa20.69■□□□□ 0.9
SNHG20-203ENST00000565256 MAP3K1Q13233 1512 aa20.68■□□□□ 0.9
SNHG20-203ENST00000565256 LRRIQ1Q96JM4 1722 aa20.68■□□□□ 0.9
SNHG20-203ENST00000565256 RAPGEF6Q8TEU7 1601 aa20.67■□□□□ 0.9
SNHG20-203ENST00000565256 EPRSP07814 1512 aaKnown RBP20.66■□□□□ 0.9
SNHG20-203ENST00000565256 TIAM1Q13009 1591 aa20.66■□□□□ 0.9
SNHG20-203ENST00000565256 HECW1Q76N89 1606 aa20.66■□□□□ 0.9
SNHG20-203ENST00000565256 MAP3K4Q9Y6R4 1608 aa20.66■□□□□ 0.9
SNHG20-203ENST00000565256 CFAP43Q8NDM7 1665 aa20.64■□□□□ 0.9
SNHG20-203ENST00000565256 ABCA8O94911 1581 aa20.63■□□□□ 0.89
SNHG20-203ENST00000565256 UACAQ9BZF9 1416 aa20.63■□□□□ 0.89
SNHG20-203ENST00000565256 KANK4Q5T7N3 995 aaPredicted RBP20.62■□□□□ 0.89
SNHG20-203ENST00000565256 KDM5BQ9UGL1 1544 aa20.62■□□□□ 0.89
SNHG20-203ENST00000565256 NUP153P49790 1475 aaKnown RBP20.6■□□□□ 0.89
SNHG20-203ENST00000565256 CCDC18Q5T9S5 1454 aa20.59■□□□□ 0.89
SNHG20-203ENST00000565256 TEX14Q8IWB6 1497 aa20.57■□□□□ 0.88
SNHG20-203ENST00000565256 LRRC9Q6ZRR7 1453 aa20.56■□□□□ 0.88
SNHG20-203ENST00000565256 CDK13Q14004 1512 aaKnown RBP20.55■□□□□ 0.88
SNHG20-203ENST00000565256 ZCCHC11Q5TAX3 1644 aaKnown RBP20.55■□□□□ 0.88
SNHG20-203ENST00000565256 ARID3CA6NKF2 412 aa20.53■□□□□ 0.88
SNHG20-203ENST00000565256 TRIM26Q12899 539 aaPredicted RBP20.51■□□□□ 0.87
SNHG20-203ENST00000565256 ATP10BO94823 1461 aa20.49■□□□□ 0.87
SNHG20-203ENST00000565256 MAGI3Q5TCQ9 1506 aa20.48■□□□□ 0.87
SNHG20-203ENST00000565256 MTUS2Q5JR59 1369 aa20.48■□□□□ 0.87
SNHG20-203ENST00000565256 WDR7Q9Y4E6 1490 aa20.48■□□□□ 0.87
SNHG20-203ENST00000565256 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.46■□□□□ 0.87
SNHG20-203ENST00000565256 HNRNPUL2Q1KMD3 747 aaKnown RBP20.46■□□□□ 0.87
SNHG20-203ENST00000565256 EHBP1L1Q8N3D4 1523 aa20.44■□□□□ 0.86
SNHG20-203ENST00000565256 CDK11AQ9UQ88 783 aaPredicted RBP20.44■□□□□ 0.86
SNHG20-203ENST00000565256 FBXO41Q8TF61 875 aa20.41■□□□□ 0.86
SNHG20-203ENST00000565256 SUPT6HQ7KZ85 1726 aaKnown RBP20.4■□□□□ 0.86
SNHG20-203ENST00000565256 CD109Q6YHK3 1445 aa20.39■□□□□ 0.85
SNHG20-203ENST00000565256 PCGF6Q9BYE7 350 aa20.39■□□□□ 0.85
SNHG20-203ENST00000565256 TROQ12816 1431 aaPredicted RBP20.37■□□□□ 0.85
SNHG20-203ENST00000565256 PLEKHD1A6NEE1 506 aa20.37■□□□□ 0.85
SNHG20-203ENST00000565256 NCOA2Q15596 1464 aa20.37■□□□□ 0.85
SNHG20-203ENST00000565256 PHLDB1Q86UU1 1377 aa20.35■□□□□ 0.85
SNHG20-203ENST00000565256 RRBP1Q9P2E9 1410 aaKnown RBP20.3■□□□□ 0.84
SNHG20-203ENST00000565256 KIF14Q15058 1648 aa20.29■□□□□ 0.84
SNHG20-203ENST00000565256 KCNH8Q96L42 1107 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms