RNA–Protein interactions for RNA: ENST00000565248.1

THUMPD1-203, Transcript of THUMP domain containing 1, humanhuman

TSL 3

Gene THUMPD1, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-203ENST00000565248 JPH4Q96JJ6 628 aa27.01■■□□□ 1.91
THUMPD1-203ENST00000565248 NPM1P06748 294 aaKnown RBP eCLIP27■■□□□ 1.91
THUMPD1-203ENST00000565248 FAM69CQ0P6D2 419 aa26.94■■□□□ 1.9
THUMPD1-203ENST00000565248 EEA1Q15075 1411 aa26.9■■□□□ 1.9
THUMPD1-203ENST00000565248 ABCC10Q5T3U5 1492 aa26.9■■□□□ 1.9
THUMPD1-203ENST00000565248 MAPKBP1O60336 1514 aa26.85■■□□□ 1.89
THUMPD1-203ENST00000565248 RUSC2Q8N2Y8 1516 aa26.85■■□□□ 1.89
THUMPD1-203ENST00000565248 FAM9AQ8IZU1 332 aaPredicted RBP26.82■■□□□ 1.88
THUMPD1-203ENST00000565248 DIP2BQ9P265 1576 aa26.79■■□□□ 1.88
THUMPD1-203ENST00000565248 KIF27Q86VH2 1401 aa26.77■■□□□ 1.88
THUMPD1-203ENST00000565248 ADCY10Q96PN6 1610 aa26.76■■□□□ 1.87
THUMPD1-203ENST00000565248 KDM6BO15054 1643 aa26.75■■□□□ 1.87
THUMPD1-203ENST00000565248 KIAA0586Q9BVV6 1533 aa26.7■■□□□ 1.87
THUMPD1-203ENST00000565248 CSRNP3Q8WYN3 585 aa26.69■■□□□ 1.86
THUMPD1-203ENST00000565248 TSPOAP1O95153 1857 aa26.68■■□□□ 1.86
THUMPD1-203ENST00000565248 KDM4FA0A1W2PPD8 638 aa26.64■■□□□ 1.86
THUMPD1-203ENST00000565248 CUL7Q14999 1698 aa26.62■■□□□ 1.85
THUMPD1-203ENST00000565248 IGF1RP08069 1367 aa26.59■■□□□ 1.85
THUMPD1-203ENST00000565248 PTPRGP23470 1445 aa26.57■■□□□ 1.84
THUMPD1-203ENST00000565248 TTBK1Q5TCY1 1321 aaPredicted RBP26.52■■□□□ 1.84
THUMPD1-203ENST00000565248 CARMIL2Q6F5E8 1435 aa26.52■■□□□ 1.84
THUMPD1-203ENST00000565248 TNIKQ9UKE5 1360 aa26.49■■□□□ 1.83
THUMPD1-203ENST00000565248 KIF21BO75037 1637 aa26.49■■□□□ 1.83
THUMPD1-203ENST00000565248 ABCC2Q92887 1545 aa26.49■■□□□ 1.83
THUMPD1-203ENST00000565248 LOC105371045A0A1W2PR82 267 aa26.48■■□□□ 1.83
THUMPD1-203ENST00000565248 PLB1Q6P1J6 1458 aa26.47■■□□□ 1.83
THUMPD1-203ENST00000565248 GOLGA3Q08378 1498 aa26.45■■□□□ 1.82
THUMPD1-203ENST00000565248 CARMIL1Q5VZK9 1371 aa26.44■■□□□ 1.82
THUMPD1-203ENST00000565248 ASXL2Q76L83 1435 aa26.43■■□□□ 1.82
THUMPD1-203ENST00000565248 PRXQ9BXM0 1461 aa26.42■■□□□ 1.82
THUMPD1-203ENST00000565248 GLI2P10070 1586 aa26.42■■□□□ 1.82
THUMPD1-203ENST00000565248 EHMT2Q96KQ7 1210 aa26.39■■□□□ 1.82
THUMPD1-203ENST00000565248 ILDR1Q86SU0 546 aaPredicted RBP26.38■■□□□ 1.81
THUMPD1-203ENST00000565248 IQGAP2Q13576 1575 aa26.37■■□□□ 1.81
THUMPD1-203ENST00000565248 UHRF1BP1LA0JNW5 1464 aa26.36■■□□□ 1.81
THUMPD1-203ENST00000565248 PPRC1Q5VV67 1664 aaKnown RBP26.36■■□□□ 1.81
THUMPD1-203ENST00000565248 UACAQ9BZF9 1416 aa26.34■■□□□ 1.81
THUMPD1-203ENST00000565248 ADGRL1O94910 1474 aa26.34■■□□□ 1.81
THUMPD1-203ENST00000565248 RAPGEF2Q9Y4G8 1499 aa26.34■■□□□ 1.81
THUMPD1-203ENST00000565248 UBTFP17480 764 aaKnown RBP26.33■■□□□ 1.81
THUMPD1-203ENST00000565248 TEX14Q8IWB6 1497 aa26.29■■□□□ 1.8
THUMPD1-203ENST00000565248 EPRSP07814 1512 aaKnown RBP26.26■■□□□ 1.79
THUMPD1-203ENST00000565248 MAP3K4Q9Y6R4 1608 aa26.25■■□□□ 1.79
THUMPD1-203ENST00000565248 KDM5BQ9UGL1 1544 aa26.24■■□□□ 1.79
THUMPD1-203ENST00000565248 PHF23Q9BUL5 403 aaPredicted RBP26.24■■□□□ 1.79
THUMPD1-203ENST00000565248 DISP1Q96F81 1524 aa26.24■■□□□ 1.79
THUMPD1-203ENST00000565248 COL17A1Q9UMD9 1497 aaPredicted RBP26.2■■□□□ 1.78
THUMPD1-203ENST00000565248 ZCCHC11Q5TAX3 1644 aaKnown RBP26.19■■□□□ 1.78
THUMPD1-203ENST00000565248 UGGT2Q9NYU1 1516 aa26.17■■□□□ 1.78
THUMPD1-203ENST00000565248 HECW2Q9P2P5 1572 aa26.14■■□□□ 1.78
THUMPD1-203ENST00000565248 KIAA0556O60303 1618 aa26.11■■□□□ 1.77
THUMPD1-203ENST00000565248 WDR7Q9Y4E6 1490 aa26.1■■□□□ 1.77
THUMPD1-203ENST00000565248 CEP162Q5TB80 1403 aa26.08■■□□□ 1.77
THUMPD1-203ENST00000565248 CD109Q6YHK3 1445 aa26.02■■□□□ 1.76
THUMPD1-203ENST00000565248 CFAP43Q8NDM7 1665 aa26.01■■□□□ 1.75
THUMPD1-203ENST00000565248 MAGI3Q5TCQ9 1506 aa26■■□□□ 1.75
THUMPD1-203ENST00000565248 CTTNBP2Q8WZ74 1663 aa25.99■■□□□ 1.75
THUMPD1-203ENST00000565248 CLIP1P30622 1438 aa25.99■■□□□ 1.75
THUMPD1-203ENST00000565248 KCNH8Q96L42 1107 aa25.99■■□□□ 1.75
THUMPD1-203ENST00000565248 RANGAP1P46060 587 aaPredicted RBP25.91■■□□□ 1.74
THUMPD1-203ENST00000565248 ABCA8O94911 1581 aa25.9■■□□□ 1.74
THUMPD1-203ENST00000565248 EFCAB5A4FU69 1503 aa25.83■■□□□ 1.73
THUMPD1-203ENST00000565248 ARAP3Q8WWN8 1544 aa25.82■■□□□ 1.72
THUMPD1-203ENST00000565248 ARHGAP35Q9NRY4 1499 aa25.79■■□□□ 1.72
THUMPD1-203ENST00000565248 FBXO41Q8TF61 875 aa25.78■■□□□ 1.72
THUMPD1-203ENST00000565248 PHLDB1Q86UU1 1377 aa25.77■■□□□ 1.72
THUMPD1-203ENST00000565248 ARID3CA6NKF2 412 aa25.72■■□□□ 1.71
THUMPD1-203ENST00000565248 VPS8Q8N3P4 1428 aa25.71■■□□□ 1.71
THUMPD1-203ENST00000565248 SAMD9Q5K651 1589 aa25.7■■□□□ 1.71
THUMPD1-203ENST00000565248 SENP3Q9H4L4 574 aaPredicted RBP25.7■■□□□ 1.7
THUMPD1-203ENST00000565248 ATP10BO94823 1461 aa25.7■■□□□ 1.7
THUMPD1-203ENST00000565248 PTPRMP28827 1452 aa25.69■■□□□ 1.7
THUMPD1-203ENST00000565248 ABCA9Q8IUA7 1624 aa25.69■■□□□ 1.7
THUMPD1-203ENST00000565248 ADAMTSL3P82987 1691 aa25.68■■□□□ 1.7
THUMPD1-203ENST00000565248 P3H3Q8IVL6 736 aa25.67■■□□□ 1.7
THUMPD1-203ENST00000565248 RAPGEF3O95398 923 aa25.64■■□□□ 1.7
THUMPD1-203ENST00000565248 ARID4BQ4LE39 1312 aaPredicted RBP25.63■■□□□ 1.69
THUMPD1-203ENST00000565248 FHOD3Q2V2M9 1422 aa25.63■■□□□ 1.69
THUMPD1-203ENST00000565248 NEO1Q92859 1461 aa25.63■■□□□ 1.69
THUMPD1-203ENST00000565248 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.62■■□□□ 1.69
THUMPD1-203ENST00000565248 HNRNPUL2Q1KMD3 747 aaKnown RBP25.62■■□□□ 1.69
THUMPD1-203ENST00000565248 FMN1Q68DA7 1419 aa25.6■■□□□ 1.69
THUMPD1-203ENST00000565248 BCORL1Q5H9F3 1711 aa25.59■■□□□ 1.69
THUMPD1-203ENST00000565248 RAPGEF6Q8TEU7 1601 aa25.57■■□□□ 1.68
THUMPD1-203ENST00000565248 APLP2Q06481 763 aa25.56■■□□□ 1.68
THUMPD1-203ENST00000565248 PCF11O94913 1555 aaKnown RBP25.54■■□□□ 1.68
THUMPD1-203ENST00000565248 MADDQ8WXG6 1647 aa25.53■■□□□ 1.68
THUMPD1-203ENST00000565248 FRMPD1Q5SYB0 1578 aa25.5■■□□□ 1.67
THUMPD1-203ENST00000565248 LMTK3Q96Q04 1460 aa25.47■■□□□ 1.67
THUMPD1-203ENST00000565248 FYCO1Q9BQS8 1478 aa25.47■■□□□ 1.67
THUMPD1-203ENST00000565248 CASKIN1Q8WXD9 1431 aa25.46■■□□□ 1.67
THUMPD1-203ENST00000565248 DENND4BO75064 1496 aaPredicted RBP25.46■■□□□ 1.67
THUMPD1-203ENST00000565248 RIMS1Q86UR5 1692 aaKnown RBP25.45■■□□□ 1.67
THUMPD1-203ENST00000565248 PLEKHD1A6NEE1 506 aa25.45■■□□□ 1.66
THUMPD1-203ENST00000565248 ARHGEF40Q8TER5 1519 aa25.45■■□□□ 1.66
THUMPD1-203ENST00000565248 POGZQ7Z3K3 1410 aa25.44■■□□□ 1.66
THUMPD1-203ENST00000565248 CFAP74Q9C0B2 1584 aa25.44■■□□□ 1.66
THUMPD1-203ENST00000565248 NUP153P49790 1475 aaKnown RBP25.42■■□□□ 1.66
THUMPD1-203ENST00000565248 RICTORQ6R327 1708 aa25.41■■□□□ 1.66
THUMPD1-203ENST00000565248 AKNAQ7Z591 1439 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms