RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-205ENST00000564778 CEP170Q5SW79 1584 aa16■□□□□ 0.15
SIN3A-205ENST00000564778 FBLN2P98095 1184 aa16■□□□□ 0.15
SIN3A-205ENST00000564778 UBTFP17480 764 aaKnown RBP15.97■□□□□ 0.15
SIN3A-205ENST00000564778 KIAA0586Q9BVV6 1533 aa15.96■□□□□ 0.15
SIN3A-205ENST00000564778 IQGAP2Q13576 1575 aa15.95■□□□□ 0.14
SIN3A-205ENST00000564778 EHMT2Q96KQ7 1210 aa15.94■□□□□ 0.14
SIN3A-205ENST00000564778 CLASP1Q7Z460 1538 aa15.93■□□□□ 0.14
SIN3A-205ENST00000564778 RIMBP3CA6NJZ7 1639 aa15.92■□□□□ 0.14
SIN3A-205ENST00000564778 RIMBP3BA6NNM3 1639 aa15.92■□□□□ 0.14
SIN3A-205ENST00000564778 RIMBP3Q9UFD9 1639 aa15.92■□□□□ 0.14
SIN3A-205ENST00000564778 ARHGEF11O15085 1522 aa15.91■□□□□ 0.14
SIN3A-205ENST00000564778 CEP162Q5TB80 1403 aa15.91■□□□□ 0.14
SIN3A-205ENST00000564778 UGGT2Q9NYU1 1516 aa15.89■□□□□ 0.13
SIN3A-205ENST00000564778 EFCAB5A4FU69 1503 aa15.88■□□□□ 0.13
SIN3A-205ENST00000564778 SHROOM2Q13796 1616 aa15.87■□□□□ 0.13
SIN3A-205ENST00000564778 SAMD9Q5K651 1589 aa15.87■□□□□ 0.13
SIN3A-205ENST00000564778 CLIP1P30622 1438 aa15.86■□□□□ 0.13
SIN3A-205ENST00000564778 ARHGAP35Q9NRY4 1499 aa15.84■□□□□ 0.13
SIN3A-205ENST00000564778 KIAA0556O60303 1618 aa15.81■□□□□ 0.12
SIN3A-205ENST00000564778 DISP1Q96F81 1524 aa15.8■□□□□ 0.12
SIN3A-205ENST00000564778 ARAP1Q96P48 1450 aa15.78■□□□□ 0.12
SIN3A-205ENST00000564778 JPH4Q96JJ6 628 aa15.77■□□□□ 0.12
SIN3A-205ENST00000564778 CARMIL2Q6F5E8 1435 aa15.75■□□□□ 0.11
SIN3A-205ENST00000564778 PRG4Q92954 1404 aaPredicted RBP15.75■□□□□ 0.11
SIN3A-205ENST00000564778 FHOD3Q2V2M9 1422 aa15.73■□□□□ 0.11
SIN3A-205ENST00000564778 CYB5RLQ6IPT4 315 aa15.72■□□□□ 0.11
SIN3A-205ENST00000564778 RANGAP1P46060 587 aaPredicted RBP15.71■□□□□ 0.11
SIN3A-205ENST00000564778 VPS8Q8N3P4 1428 aa15.7■□□□□ 0.1
SIN3A-205ENST00000564778 ERCC6L2Q5T890 1561 aa15.7■□□□□ 0.1
SIN3A-205ENST00000564778 FMN1Q68DA7 1419 aa15.68■□□□□ 0.1
SIN3A-205ENST00000564778 PCF11O94913 1555 aaKnown RBP15.63■□□□□ 0.09
SIN3A-205ENST00000564778 P3H3Q8IVL6 736 aa15.63■□□□□ 0.09
SIN3A-205ENST00000564778 FYCO1Q9BQS8 1478 aa15.63■□□□□ 0.09
SIN3A-205ENST00000564778 CASKIN1Q8WXD9 1431 aa15.62■□□□□ 0.09
SIN3A-205ENST00000564778 PTPRGP23470 1445 aa15.6■□□□□ 0.09
SIN3A-205ENST00000564778 ABCA8O94911 1581 aa15.6■□□□□ 0.09
SIN3A-205ENST00000564778 RAPGEF6Q8TEU7 1601 aa15.59■□□□□ 0.09
SIN3A-205ENST00000564778 HECW1Q76N89 1606 aa15.58■□□□□ 0.09
SIN3A-205ENST00000564778 PLB1Q6P1J6 1458 aa15.56■□□□□ 0.08
SIN3A-205ENST00000564778 MAP3K1Q13233 1512 aa15.54■□□□□ 0.08
SIN3A-205ENST00000564778 ABCC2Q92887 1545 aa15.54■□□□□ 0.08
SIN3A-205ENST00000564778 UHRF1BP1LA0JNW5 1464 aa15.54■□□□□ 0.08
SIN3A-205ENST00000564778 NUP153P49790 1475 aaKnown RBP15.54■□□□□ 0.08
SIN3A-205ENST00000564778 UACAQ9BZF9 1416 aa15.54■□□□□ 0.08
SIN3A-205ENST00000564778 CFAP43Q8NDM7 1665 aa15.53■□□□□ 0.08
SIN3A-205ENST00000564778 CCDC18Q5T9S5 1454 aa15.52■□□□□ 0.08
SIN3A-205ENST00000564778 LRRIQ1Q96JM4 1722 aa15.51■□□□□ 0.07
SIN3A-205ENST00000564778 TIAM1Q13009 1591 aa15.5■□□□□ 0.07
SIN3A-205ENST00000564778 EPRSP07814 1512 aaKnown RBP15.5■□□□□ 0.07
SIN3A-205ENST00000564778 ADCY10Q96PN6 1610 aa15.49■□□□□ 0.07
SIN3A-205ENST00000564778 TRHP20396 242 aaPredicted RBP15.48■□□□□ 0.07
SIN3A-205ENST00000564778 TTBK1Q5TCY1 1321 aaPredicted RBP15.46■□□□□ 0.07
SIN3A-205ENST00000564778 KDM5BQ9UGL1 1544 aa15.46■□□□□ 0.07
SIN3A-205ENST00000564778 CDK13Q14004 1512 aaKnown RBP15.45■□□□□ 0.06
SIN3A-205ENST00000564778 ATP10BO94823 1461 aa15.43■□□□□ 0.06
SIN3A-205ENST00000564778 LRRC9Q6ZRR7 1453 aa15.41■□□□□ 0.06
SIN3A-205ENST00000564778 APLP2Q06481 763 aa15.41■□□□□ 0.06
SIN3A-205ENST00000564778 ZCCHC11Q5TAX3 1644 aaKnown RBP15.41■□□□□ 0.06
SIN3A-205ENST00000564778 EHBP1L1Q8N3D4 1523 aa15.41■□□□□ 0.06
SIN3A-205ENST00000564778 MAGI3Q5TCQ9 1506 aa15.39■□□□□ 0.05
SIN3A-205ENST00000564778 ATP1B4Q9UN42 357 aaPredicted RBP15.39■□□□□ 0.05
SIN3A-205ENST00000564778 NPM1P06748 294 aaKnown RBP eCLIP15.36■□□□□ 0.05
SIN3A-205ENST00000564778 TROQ12816 1431 aaPredicted RBP15.35■□□□□ 0.05
SIN3A-205ENST00000564778 KANK4Q5T7N3 995 aaPredicted RBP15.34■□□□□ 0.05
SIN3A-205ENST00000564778 MTUS2Q5JR59 1369 aa15.34■□□□□ 0.05
SIN3A-205ENST00000564778 MAPKBP1O60336 1514 aa15.33■□□□□ 0.05
SIN3A-205ENST00000564778 ARID3CA6NKF2 412 aa15.33■□□□□ 0.04
SIN3A-205ENST00000564778 CDK11AQ9UQ88 783 aaPredicted RBP15.33■□□□□ 0.04
SIN3A-205ENST00000564778 SUPT6HQ7KZ85 1726 aaKnown RBP15.31■□□□□ 0.04
SIN3A-205ENST00000564778 WDR7Q9Y4E6 1490 aa15.31■□□□□ 0.04
SIN3A-205ENST00000564778 KIF14Q15058 1648 aa15.29■□□□□ 0.04
SIN3A-205ENST00000564778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.29■□□□□ 0.04
SIN3A-205ENST00000564778 HNRNPUL2Q1KMD3 747 aaKnown RBP15.29■□□□□ 0.04
SIN3A-205ENST00000564778 NCOA2Q15596 1464 aa15.28■□□□□ 0.04
SIN3A-205ENST00000564778 ASXL2Q76L83 1435 aa15.28■□□□□ 0.04
SIN3A-205ENST00000564778 PLEKHD1A6NEE1 506 aa15.28■□□□□ 0.04
SIN3A-205ENST00000564778 KIF13AQ9H1H9 1805 aa15.27■□□□□ 0.04
SIN3A-205ENST00000564778 ABCC10Q5T3U5 1492 aa15.26■□□□□ 0.03
SIN3A-205ENST00000564778 PPARGC1BQ86YN6 1023 aaKnown RBP15.24■□□□□ 0.03
SIN3A-205ENST00000564778 DIP2BQ9P265 1576 aa15.24■□□□□ 0.03
SIN3A-205ENST00000564778 PHLDB1Q86UU1 1377 aa15.23■□□□□ 0.03
SIN3A-205ENST00000564778 TTC37Q6PGP7 1564 aa15.22■□□□□ 0.03
SIN3A-205ENST00000564778 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.22■□□□□ 0.038e-8■■■□□ 18.8
SIN3A-205ENST00000564778 ABCA9Q8IUA7 1624 aa15.21■□□□□ 0.03
SIN3A-205ENST00000564778 MYOM3Q5VTT5 1437 aa15.2■□□□□ 0.02
SIN3A-205ENST00000564778 ITSN2Q9NZM3 1697 aa15.2■□□□□ 0.02
SIN3A-205ENST00000564778 FAM69CQ0P6D2 419 aa15.2■□□□□ 0.02
SIN3A-205ENST00000564778 RRBP1Q9P2E9 1410 aaKnown RBP15.19■□□□□ 0.02
SIN3A-205ENST00000564778 GLI2P10070 1586 aa15.19■□□□□ 0.02
SIN3A-205ENST00000564778 ARAP3Q8WWN8 1544 aa15.18■□□□□ 0.02
SIN3A-205ENST00000564778 GPATCH8Q9UKJ3 1502 aaKnown RBP15.18■□□□□ 0.02
SIN3A-205ENST00000564778 PREX2Q70Z35 1606 aa15.18■□□□□ 0.02
SIN3A-205ENST00000564778 CDC42BPAQ5VT25 1732 aa15.18■□□□□ 0.02
SIN3A-205ENST00000564778 CCNB3Q8WWL7 1395 aa15.17■□□□□ 0.02
SIN3A-205ENST00000564778 MYO5CQ9NQX4 1742 aa15.17■□□□□ 0.02
SIN3A-205ENST00000564778 FGD6Q6ZV73 1430 aa15.17■□□□□ 0.02
SIN3A-205ENST00000564778 MIA2Q96PC5 1412 aa15.17■□□□□ 0.02
SIN3A-205ENST00000564778 TCOF1Q13428 1488 aaKnown RBP15.14■□□□□ 0.01
SIN3A-205ENST00000564778 CDC42BPBQ9Y5S2 1711 aa15.13■□□□□ 0.01
SIN3A-205ENST00000564778 MAP3K4Q9Y6R4 1608 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms