RNA–Protein interactions for RNA: ENST00000563824.5

TCF4-220, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-220ENST00000563824 PRKAR2AP13861 404 aaKnown RBP11.63□□□□□ -0.55
TCF4-220ENST00000563824 DCAF1Q9Y4B6 1507 aa11.62□□□□□ -0.55
TCF4-220ENST00000563824 HAP1P54257 671 aaPredicted RBP11.6□□□□□ -0.55
TCF4-220ENST00000563824 ECM2O94769 699 aaPredicted RBP11.59□□□□□ -0.55
TCF4-220ENST00000563824 MIER1Q8N108 512 aa11.59□□□□□ -0.55
TCF4-220ENST00000563824 GABBR2O75899 941 aa11.58□□□□□ -0.56
TCF4-220ENST00000563824 PLEKHG5O94827 1062 aa11.57□□□□□ -0.56
TCF4-220ENST00000563824 LHX8Q68G74 356 aa11.56□□□□□ -0.56
TCF4-220ENST00000563824 SPDYE1Q8NFV5 336 aaPredicted RBP11.55□□□□□ -0.56
TCF4-220ENST00000563824 SCRIBQ14160 1630 aa11.53□□□□□ -0.56
TCF4-220ENST00000563824 ZBTB47Q9UFB7 747 aaPredicted RBP11.51□□□□□ -0.57
TCF4-220ENST00000563824 ERCC6Q03468 1493 aa11.51□□□□□ -0.57
TCF4-220ENST00000563824 CLEC11AQ9Y240 323 aa11.5□□□□□ -0.57
TCF4-220ENST00000563824 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.48□□□□□ -0.57
TCF4-220ENST00000563824 ZCCHC6Q5VYS8 1495 aaKnown RBP11.46□□□□□ -0.57
TCF4-220ENST00000563824 CIZ1Q9ULV3 898 aaPredicted RBP11.45□□□□□ -0.58
TCF4-220ENST00000563824 BBXQ8WY36 941 aaPredicted RBP11.42□□□□□ -0.58
TCF4-220ENST00000563824 TRIM41Q8WV44 630 aa11.41□□□□□ -0.58
TCF4-220ENST00000563824 RGL2O15211 777 aa11.4□□□□□ -0.58
TCF4-220ENST00000563824 POTEIP0CG38 1075 aa11.39□□□□□ -0.59
TCF4-220ENST00000563824 CHADLQ6NUI6 762 aa11.39□□□□□ -0.59
TCF4-220ENST00000563824 PAXIP1Q6ZW49 1069 aaPredicted RBP11.37□□□□□ -0.59
TCF4-220ENST00000563824 CFAP44Q96MT7 982 aa11.37□□□□□ -0.59
TCF4-220ENST00000563824 VSIG10Q8N0Z9 540 aa11.35□□□□□ -0.59
TCF4-220ENST00000563824 NPM1P06748 294 aaKnown RBP eCLIP11.34□□□□□ -0.59
TCF4-220ENST00000563824 NCAPD3P42695 1498 aa11.32□□□□□ -0.6
TCF4-220ENST00000563824 BCANQ96GW7 911 aa11.3□□□□□ -0.6
TCF4-220ENST00000563824 CHGAP10645 457 aaKnown RBP11.29□□□□□ -0.6
TCF4-220ENST00000563824 PRR29P0C7W0 189 aa11.28□□□□□ -0.6
TCF4-220ENST00000563824 GSE1Q14687 1217 aa11.27□□□□□ -0.61
TCF4-220ENST00000563824 SPRYD3Q8NCJ5 442 aa11.26□□□□□ -0.61
TCF4-220ENST00000563824 CLCN6P51797 869 aa11.23□□□□□ -0.61
TCF4-220ENST00000563824 THOC2Q8NI27 1593 aaKnown RBP11.23□□□□□ -0.61
TCF4-220ENST00000563824 CD44P16070 742 aaKnown RBP11.22□□□□□ -0.61
TCF4-220ENST00000563824 FARP1Q9Y4F1 1045 aaPredicted RBP11.21□□□□□ -0.61
TCF4-220ENST00000563824 DCAF8Q5TAQ9 597 aa11.2□□□□□ -0.62
TCF4-220ENST00000563824 HMGXB3Q12766 1538 aa11.19□□□□□ -0.62
TCF4-220ENST00000563824 NUBP1P53384 320 aa11.17□□□□□ -0.62
TCF4-220ENST00000563824 FAM212AQ96EL1 285 aa11.17□□□□□ -0.62
TCF4-220ENST00000563824 TAOK2Q9UL54 1235 aa11.17□□□□□ -0.62
TCF4-220ENST00000563824 SMARCA2P51531 1590 aa11.16□□□□□ -0.62
TCF4-220ENST00000563824 HS6ST3Q8IZP7 471 aa11.16□□□□□ -0.62
TCF4-220ENST00000563824 ATAD2BQ9ULI0 1458 aa11.16□□□□□ -0.62
TCF4-220ENST00000563824 NESP48681 1621 aa11.16□□□□□ -0.62
TCF4-220ENST00000563824 LAMC3Q9Y6N6 1575 aa11.16□□□□□ -0.62
TCF4-220ENST00000563824 KDM2AQ9Y2K7 1162 aa11.15□□□□□ -0.62
TCF4-220ENST00000563824 PDS5BQ9NTI5 1447 aa11.12□□□□□ -0.63
TCF4-220ENST00000563824 RNF25Q96BH1 459 aaPredicted RBP11.12□□□□□ -0.63
TCF4-220ENST00000563824 TSHZ2Q9NRE2 1034 aa11.12□□□□□ -0.63
TCF4-220ENST00000563824 PLSCR2Q9NRY7 297 aa11.12□□□□□ -0.63
TCF4-220ENST00000563824 CREBZFQ9NS37 354 aa11.12□□□□□ -0.63
TCF4-220ENST00000563824 RIOK3O14730 519 aaKnown RBP11.11□□□□□ -0.63
TCF4-220ENST00000563824 ZNF579Q8NAF0 562 aaKnown RBP11.08□□□□□ -0.64
TCF4-220ENST00000563824 DCBLD2Q96PD2 775 aa11.07□□□□□ -0.64
TCF4-220ENST00000563824 BAZ1AQ9NRL2 1556 aaPredicted RBP11.05□□□□□ -0.64
TCF4-220ENST00000563824 KIF21AQ7Z4S6 1674 aa11.04□□□□□ -0.64
TCF4-220ENST00000563824 STK25O00506 426 aa11.04□□□□□ -0.64
TCF4-220ENST00000563824 OTUD5Q96G74 571 aa11.04□□□□□ -0.64
TCF4-220ENST00000563824 VGFO15240 615 aaPredicted RBP11.03□□□□□ -0.64
TCF4-220ENST00000563824 MNX1P50219 401 aaPredicted RBP11.03□□□□□ -0.64
TCF4-220ENST00000563824 BAZ1BQ9UIG0 1483 aaKnown RBP11.02□□□□□ -0.65
TCF4-220ENST00000563824 RASEFQ8IZ41 740 aa11.02□□□□□ -0.65
TCF4-220ENST00000563824 POTEB2H3BUK9 544 aa11.01□□□□□ -0.65
TCF4-220ENST00000563824 MRC2Q9UBG0 1479 aa11□□□□□ -0.65
TCF4-220ENST00000563824 SMARCA4P51532 1647 aa11□□□□□ -0.65
TCF4-220ENST00000563824 PRKCSHP14314 528 aaPredicted RBP10.99□□□□□ -0.65
TCF4-220ENST00000563824 WDR62O43379 1518 aa10.99□□□□□ -0.65
TCF4-220ENST00000563824 ZRANB1Q9UGI0 708 aa10.98□□□□□ -0.65
TCF4-220ENST00000563824 PYGBP11216 843 aa10.97□□□□□ -0.65
TCF4-220ENST00000563824 CHRM1P11229 460 aaPredicted RBP10.97□□□□□ -0.65
TCF4-220ENST00000563824 PEG3Q9GZU2 1588 aa10.97□□□□□ -0.65
TCF4-220ENST00000563824 GALR2O43603 387 aaPredicted RBP10.96□□□□□ -0.65
TCF4-220ENST00000563824 NKX1-1Q15270 411 aaPredicted RBP10.96□□□□□ -0.65
TCF4-220ENST00000563824 STK24Q9Y6E0 443 aa10.96□□□□□ -0.65
TCF4-220ENST00000563824 NBR1Q14596 966 aa10.95□□□□□ -0.66
TCF4-220ENST00000563824 TPRNQ4KMQ1 711 aa10.94□□□□□ -0.66
TCF4-220ENST00000563824 CADPSQ9ULU8 1353 aa10.93□□□□□ -0.66
TCF4-220ENST00000563824 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.93□□□□□ -0.66
TCF4-220ENST00000563824 ZFP91Q96JP5 570 aaPredicted RBP10.93□□□□□ -0.66
TCF4-220ENST00000563824 BCL11BQ9C0K0 894 aaPredicted RBP10.93□□□□□ -0.66
TCF4-220ENST00000563824 RIMBP3CA6NJZ7 1639 aa10.93□□□□□ -0.66
TCF4-220ENST00000563824 RIMBP3BA6NNM3 1639 aa10.93□□□□□ -0.66
TCF4-220ENST00000563824 RIMBP3Q9UFD9 1639 aa10.93□□□□□ -0.66
TCF4-220ENST00000563824 GTPBP6O43824 516 aaPredicted RBP10.91□□□□□ -0.66
TCF4-220ENST00000563824 RYDENQ9NUL5 291 aaKnown RBP10.91□□□□□ -0.66
TCF4-220ENST00000563824 SGIP1Q9BQI5 828 aa10.89□□□□□ -0.67
TCF4-220ENST00000563824 POTEMA6NI47 508 aa10.88□□□□□ -0.67
TCF4-220ENST00000563824 TSPYL2Q9H2G4 693 aaPredicted RBP10.87□□□□□ -0.67
TCF4-220ENST00000563824 PELP1Q8IZL8 1130 aaKnown RBP10.86□□□□□ -0.67
TCF4-220ENST00000563824 CEP164Q9UPV0 1460 aa10.86□□□□□ -0.67
TCF4-220ENST00000563824 ARHGEF11O15085 1522 aa10.85□□□□□ -0.67
TCF4-220ENST00000563824 POTEGQ6S5H5 508 aa10.83□□□□□ -0.68
TCF4-220ENST00000563824 ZNF467Q7Z7K2 595 aaPredicted RBP10.83□□□□□ -0.68
TCF4-220ENST00000563824 ILDR1Q86SU0 546 aaPredicted RBP10.81□□□□□ -0.68
TCF4-220ENST00000563824 PHF12Q96QT6 1004 aa10.8□□□□□ -0.68
TCF4-220ENST00000563824 POTEJP0CG39 1038 aa10.78□□□□□ -0.68
TCF4-220ENST00000563824 CYB5RLQ6IPT4 315 aa10.78□□□□□ -0.68
TCF4-220ENST00000563824 PCDH10Q9P2E7 1040 aa10.78□□□□□ -0.68
TCF4-220ENST00000563824 FANCD2Q9BXW9 1451 aa10.77□□□□□ -0.69
TCF4-220ENST00000563824 PDAP1Q13442 181 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms