RNA–Protein interactions for RNA: ENST00000563513.1

FANCA-212, Transcript of FA complementation group A, humanhuman

TSL 4

Gene FANCA, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-212ENST00000563513 KIAA0586Q9BVV6 1533 aa30.67■■■□□ 2.5
FANCA-212ENST00000563513 LOC105371045A0A1W2PR82 267 aa30.59■■■□□ 2.49
FANCA-212ENST00000563513 UBTFP17480 764 aaKnown RBP30.58■■■□□ 2.49
FANCA-212ENST00000563513 JPH4Q96JJ6 628 aa30.56■■■□□ 2.48
FANCA-212ENST00000563513 CTTNBP2Q8WZ74 1663 aa30.54■■■□□ 2.48
FANCA-212ENST00000563513 IQGAP2Q13576 1575 aa30.53■■■□□ 2.48
FANCA-212ENST00000563513 SHROOM2Q13796 1616 aa30.51■■■□□ 2.47
FANCA-212ENST00000563513 DNAJC5Q9H3Z4 198 aa30.5■■■□□ 2.47
FANCA-212ENST00000563513 TNIKQ9UKE5 1360 aa30.45■■■□□ 2.47
FANCA-212ENST00000563513 UGGT2Q9NYU1 1516 aa30.42■■■□□ 2.46
FANCA-212ENST00000563513 PRG4Q92954 1404 aaPredicted RBP30.41■■■□□ 2.46
FANCA-212ENST00000563513 ERCC6L2Q5T890 1561 aa30.39■■■□□ 2.46
FANCA-212ENST00000563513 ARHGEF11O15085 1522 aa30.35■■■□□ 2.45
FANCA-212ENST00000563513 DISP1Q96F81 1524 aa30.35■■■□□ 2.45
FANCA-212ENST00000563513 RANGAP1P46060 587 aaPredicted RBP30.34■■■□□ 2.45
FANCA-212ENST00000563513 RIMBP3CA6NJZ7 1639 aa30.29■■■□□ 2.44
FANCA-212ENST00000563513 RIMBP3BA6NNM3 1639 aa30.29■■■□□ 2.44
FANCA-212ENST00000563513 RIMBP3Q9UFD9 1639 aa30.29■■■□□ 2.44
FANCA-212ENST00000563513 CARMIL2Q6F5E8 1435 aa30.27■■■□□ 2.44
FANCA-212ENST00000563513 SAMD9Q5K651 1589 aa30.25■■■□□ 2.43
FANCA-212ENST00000563513 KIAA0556O60303 1618 aa30.25■■■□□ 2.43
FANCA-212ENST00000563513 P3H3Q8IVL6 736 aa30.23■■■□□ 2.43
FANCA-212ENST00000563513 ARHGAP35Q9NRY4 1499 aa30.2■■■□□ 2.43
FANCA-212ENST00000563513 EFCAB5A4FU69 1503 aa30.17■■■□□ 2.42
FANCA-212ENST00000563513 CLIP1P30622 1438 aa30.17■■■□□ 2.42
FANCA-212ENST00000563513 CEP162Q5TB80 1403 aa30.17■■■□□ 2.42
FANCA-212ENST00000563513 ARAP1Q96P48 1450 aa30.17■■■□□ 2.42
FANCA-212ENST00000563513 FHOD3Q2V2M9 1422 aa30.13■■■□□ 2.41
FANCA-212ENST00000563513 PTPRGP23470 1445 aa30.12■■■□□ 2.41
FANCA-212ENST00000563513 TTBK1Q5TCY1 1321 aaPredicted RBP30.1■■■□□ 2.41
FANCA-212ENST00000563513 CYB5RLQ6IPT4 315 aa30.09■■■□□ 2.41
FANCA-212ENST00000563513 PLB1Q6P1J6 1458 aa29.95■■■□□ 2.39
FANCA-212ENST00000563513 UACAQ9BZF9 1416 aa29.93■■■□□ 2.38
FANCA-212ENST00000563513 ABCA8O94911 1581 aa29.91■■■□□ 2.38
FANCA-212ENST00000563513 FMN1Q68DA7 1419 aa29.91■■■□□ 2.38
FANCA-212ENST00000563513 UHRF1BP1LA0JNW5 1464 aa29.87■■■□□ 2.37
FANCA-212ENST00000563513 ADCY10Q96PN6 1610 aa29.85■■■□□ 2.37
FANCA-212ENST00000563513 ABCC2Q92887 1545 aa29.85■■■□□ 2.37
FANCA-212ENST00000563513 RAPGEF6Q8TEU7 1601 aa29.82■■■□□ 2.36
FANCA-212ENST00000563513 NUP153P49790 1475 aaKnown RBP29.78■■■□□ 2.36
FANCA-212ENST00000563513 CASKIN1Q8WXD9 1431 aa29.78■■■□□ 2.36
FANCA-212ENST00000563513 VPS8Q8N3P4 1428 aa29.77■■■□□ 2.36
FANCA-212ENST00000563513 PCF11O94913 1555 aaKnown RBP29.74■■■□□ 2.35
FANCA-212ENST00000563513 KDM5BQ9UGL1 1544 aa29.74■■■□□ 2.35
FANCA-212ENST00000563513 ARID3CA6NKF2 412 aa29.71■■■□□ 2.35
FANCA-212ENST00000563513 ATP1B4Q9UN42 357 aaPredicted RBP29.71■■■□□ 2.35
FANCA-212ENST00000563513 ATP10BO94823 1461 aa29.71■■■□□ 2.35
FANCA-212ENST00000563513 FYCO1Q9BQS8 1478 aa29.69■■■□□ 2.34
FANCA-212ENST00000563513 NPM1P06748 294 aaKnown RBP eCLIP29.67■■■□□ 2.34
FANCA-212ENST00000563513 HECW1Q76N89 1606 aa29.67■■■□□ 2.34
FANCA-212ENST00000563513 EPRSP07814 1512 aaKnown RBP29.65■■■□□ 2.34
FANCA-212ENST00000563513 ZCCHC11Q5TAX3 1644 aaKnown RBP29.64■■■□□ 2.34
FANCA-212ENST00000563513 LRRIQ1Q96JM4 1722 aa29.63■■■□□ 2.33
FANCA-212ENST00000563513 CDK13Q14004 1512 aaKnown RBP29.61■■■□□ 2.33
FANCA-212ENST00000563513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.56■■■□□ 2.32
FANCA-212ENST00000563513 HNRNPUL2Q1KMD3 747 aaKnown RBP29.56■■■□□ 2.32
FANCA-212ENST00000563513 MAPKBP1O60336 1514 aa29.54■■■□□ 2.32
FANCA-212ENST00000563513 CCDC18Q5T9S5 1454 aa29.54■■■□□ 2.32
FANCA-212ENST00000563513 ASXL2Q76L83 1435 aa29.54■■■□□ 2.32
FANCA-212ENST00000563513 PLEKHD1A6NEE1 506 aa29.47■■■□□ 2.31
FANCA-212ENST00000563513 WDR7Q9Y4E6 1490 aa29.45■■■□□ 2.31
FANCA-212ENST00000563513 CDK11AQ9UQ88 783 aaPredicted RBP29.44■■■□□ 2.3
FANCA-212ENST00000563513 MAP3K1Q13233 1512 aa29.44■■■□□ 2.3
FANCA-212ENST00000563513 MAGI3Q5TCQ9 1506 aa29.44■■■□□ 2.3
FANCA-212ENST00000563513 TIAM1Q13009 1591 aa29.43■■■□□ 2.3
FANCA-212ENST00000563513 KANK4Q5T7N3 995 aaPredicted RBP29.39■■■□□ 2.3
FANCA-212ENST00000563513 KCNH8Q96L42 1107 aa29.39■■■□□ 2.3
FANCA-212ENST00000563513 CFAP43Q8NDM7 1665 aa29.39■■■□□ 2.3
FANCA-212ENST00000563513 TROQ12816 1431 aaPredicted RBP29.37■■■□□ 2.29
FANCA-212ENST00000563513 APLP2Q06481 763 aa29.37■■■□□ 2.29
FANCA-212ENST00000563513 ABCC10Q5T3U5 1492 aa29.36■■■□□ 2.29
FANCA-212ENST00000563513 LRRC9Q6ZRR7 1453 aa29.32■■■□□ 2.28
FANCA-212ENST00000563513 DIP2BQ9P265 1576 aa29.3■■■□□ 2.28
FANCA-212ENST00000563513 MTUS2Q5JR59 1369 aa29.3■■■□□ 2.28
FANCA-212ENST00000563513 FAM69CQ0P6D2 419 aa29.3■■■□□ 2.28
FANCA-212ENST00000563513 GLI2P10070 1586 aa29.27■■■□□ 2.28
FANCA-212ENST00000563513 KIF14Q15058 1648 aa29.26■■■□□ 2.27
FANCA-212ENST00000563513 EHBP1L1Q8N3D4 1523 aa29.25■■■□□ 2.27
FANCA-212ENST00000563513 KIF13AQ9H1H9 1805 aa29.25■■■□□ 2.27
FANCA-212ENST00000563513 TRHP20396 242 aaPredicted RBP29.24■■■□□ 2.27
FANCA-212ENST00000563513 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.23■■■□□ 2.275e-7■■■□□ 18.8
FANCA-212ENST00000563513 ABCA9Q8IUA7 1624 aa29.2■■■□□ 2.26
FANCA-212ENST00000563513 PPARGC1BQ86YN6 1023 aaKnown RBP29.18■■■□□ 2.26
FANCA-212ENST00000563513 TTC37Q6PGP7 1564 aa29.17■■■□□ 2.26
FANCA-212ENST00000563513 MAP3K4Q9Y6R4 1608 aa29.15■■■□□ 2.26
FANCA-212ENST00000563513 CD109Q6YHK3 1445 aa29.14■■■□□ 2.26
FANCA-212ENST00000563513 NCOA2Q15596 1464 aa29.14■■■□□ 2.26
FANCA-212ENST00000563513 SUPT6HQ7KZ85 1726 aaKnown RBP29.12■■■□□ 2.25
FANCA-212ENST00000563513 PLCH2O75038 1416 aa29.08■■■□□ 2.25
FANCA-212ENST00000563513 GPATCH8Q9UKJ3 1502 aaKnown RBP29.08■■■□□ 2.25
FANCA-212ENST00000563513 CCNB3Q8WWL7 1395 aa29.05■■■□□ 2.24
FANCA-212ENST00000563513 PPRC1Q5VV67 1664 aaKnown RBP29.05■■■□□ 2.24
FANCA-212ENST00000563513 PHLDB1Q86UU1 1377 aa29.03■■■□□ 2.24
FANCA-212ENST00000563513 TSPOAP1O95153 1857 aa29.02■■■□□ 2.24
FANCA-212ENST00000563513 CDC42BPAQ5VT25 1732 aa29.02■■■□□ 2.24
FANCA-212ENST00000563513 MYO5CQ9NQX4 1742 aa29■■■□□ 2.23
FANCA-212ENST00000563513 CDC42BPBQ9Y5S2 1711 aa29■■■□□ 2.23
FANCA-212ENST00000563513 ARAP3Q8WWN8 1544 aa28.99■■■□□ 2.23
FANCA-212ENST00000563513 PREX2Q70Z35 1606 aa28.98■■■□□ 2.23
FANCA-212ENST00000563513 MYOM3Q5VTT5 1437 aa28.95■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms