RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 SYNJ2O15056 1496 aa10.58□□□□□ -0.72
CNOT1-204ENST00000563130 ERICH3Q5RHP9 1530 aa10.58□□□□□ -0.72
CNOT1-204ENST00000563130 CHD1O14646 1710 aa10.56□□□□□ -0.72
CNOT1-204ENST00000563130 KIF27Q86VH2 1401 aa10.56□□□□□ -0.72
CNOT1-204ENST00000563130 FBLN2P98095 1184 aa10.55□□□□□ -0.72
CNOT1-204ENST00000563130 CHMP7Q8WUX9 453 aaPredicted RBP10.55□□□□□ -0.72
CNOT1-204ENST00000563130 TRIM41Q8WV44 630 aa10.55□□□□□ -0.72
CNOT1-204ENST00000563130 ADAMTS12P58397 1594 aa10.54□□□□□ -0.72
CNOT1-204ENST00000563130 IGF1RP08069 1367 aa10.54□□□□□ -0.72
CNOT1-204ENST00000563130 FOXD4L1Q9NU39 408 aa10.54□□□□□ -0.72
CNOT1-204ENST00000563130 FHAD1B1AJZ9 1412 aa10.54□□□□□ -0.72
CNOT1-204ENST00000563130 RNF39Q9H2S5 420 aa10.53□□□□□ -0.72
CNOT1-204ENST00000563130 GRIN2AQ12879 1464 aa10.51□□□□□ -0.73
CNOT1-204ENST00000563130 CLASP1Q7Z460 1538 aa10.49□□□□□ -0.73
CNOT1-204ENST00000563130 RUSC2Q8N2Y8 1516 aa10.49□□□□□ -0.73
CNOT1-204ENST00000563130 EHMT2Q96KQ7 1210 aa10.49□□□□□ -0.73
CNOT1-204ENST00000563130 NUP160Q12769 1436 aa10.49□□□□□ -0.73
CNOT1-204ENST00000563130 U3KPZ7 1027 aaPredicted RBP10.47□□□□□ -0.73
CNOT1-204ENST00000563130 CUL7Q14999 1698 aa10.47□□□□□ -0.73
CNOT1-204ENST00000563130 ZBTB22O15209 634 aa10.46□□□□□ -0.73
CNOT1-204ENST00000563130 CARMIL1Q5VZK9 1371 aa10.46□□□□□ -0.74
CNOT1-204ENST00000563130 CEP170Q5SW79 1584 aa10.45□□□□□ -0.74
CNOT1-204ENST00000563130 ARHGEF11O15085 1522 aa10.44□□□□□ -0.74
CNOT1-204ENST00000563130 MYCNP04198 464 aaPredicted RBP10.43□□□□□ -0.74
CNOT1-204ENST00000563130 C1QBPQ07021 282 aaKnown RBP10.43□□□□□ -0.74
CNOT1-204ENST00000563130 RIMBP3CA6NJZ7 1639 aa10.42□□□□□ -0.74
CNOT1-204ENST00000563130 RIMBP3BA6NNM3 1639 aa10.42□□□□□ -0.74
CNOT1-204ENST00000563130 RIMBP3Q9UFD9 1639 aa10.42□□□□□ -0.74
CNOT1-204ENST00000563130 PRXQ9BXM0 1461 aa10.4□□□□□ -0.75
CNOT1-204ENST00000563130 RAPGEF2Q9Y4G8 1499 aa10.4□□□□□ -0.75
CNOT1-204ENST00000563130 EEA1Q15075 1411 aa10.4□□□□□ -0.75
CNOT1-204ENST00000563130 SHROOM2Q13796 1616 aa10.39□□□□□ -0.75
CNOT1-204ENST00000563130 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.39□□□□□ -0.75
CNOT1-204ENST00000563130 HNRNPUL2Q1KMD3 747 aaKnown RBP10.39□□□□□ -0.75
CNOT1-204ENST00000563130 CSRNP3Q8WYN3 585 aa10.38□□□□□ -0.75
CNOT1-204ENST00000563130 KIAA0586Q9BVV6 1533 aa10.38□□□□□ -0.75
CNOT1-204ENST00000563130 JPH4Q96JJ6 628 aa10.36□□□□□ -0.75
CNOT1-204ENST00000563130 ARAP1Q96P48 1450 aa10.36□□□□□ -0.75
CNOT1-204ENST00000563130 SAMD1Q6SPF0 538 aaPredicted RBP10.34□□□□□ -0.75
CNOT1-204ENST00000563130 ERCC6L2Q5T890 1561 aa10.34□□□□□ -0.75
CNOT1-204ENST00000563130 PRG4Q92954 1404 aaPredicted RBP10.33□□□□□ -0.76
CNOT1-204ENST00000563130 CYB5RLQ6IPT4 315 aa10.32□□□□□ -0.76
CNOT1-204ENST00000563130 APLP2Q06481 763 aa10.32□□□□□ -0.76
CNOT1-204ENST00000563130 IQGAP2Q13576 1575 aa10.31□□□□□ -0.76
CNOT1-204ENST00000563130 CACNB1Q02641 598 aaPredicted RBP10.31□□□□□ -0.76
CNOT1-204ENST00000563130 FAM9AQ8IZU1 332 aaPredicted RBP10.3□□□□□ -0.76
CNOT1-204ENST00000563130 KIF21BO75037 1637 aa10.28□□□□□ -0.76
CNOT1-204ENST00000563130 UGGT2Q9NYU1 1516 aa10.28□□□□□ -0.76
CNOT1-204ENST00000563130 CTTNBP2Q8WZ74 1663 aa10.26□□□□□ -0.77
CNOT1-204ENST00000563130 DISP1Q96F81 1524 aa10.26□□□□□ -0.77
CNOT1-204ENST00000563130 CARMIL2Q6F5E8 1435 aa10.25□□□□□ -0.77
CNOT1-204ENST00000563130 TNIKQ9UKE5 1360 aa10.22□□□□□ -0.77
CNOT1-204ENST00000563130 KIAA0556O60303 1618 aa10.22□□□□□ -0.77
CNOT1-204ENST00000563130 PTPRGP23470 1445 aa10.21□□□□□ -0.78
CNOT1-204ENST00000563130 GOLGA3Q08378 1498 aa10.21□□□□□ -0.78
CNOT1-204ENST00000563130 ATXN8OSP0DMR3 200 aa10.21□□□□□ -0.78
CNOT1-204ENST00000563130 CAPN15O75808 1086 aa10.18□□□□□ -0.78
CNOT1-204ENST00000563130 SPINK5Q9NQ38 1064 aaPredicted RBP10.18□□□□□ -0.78
CNOT1-204ENST00000563130 SAMD9Q5K651 1589 aa10.17□□□□□ -0.78
CNOT1-204ENST00000563130 ADCY10Q96PN6 1610 aa10.17□□□□□ -0.78
CNOT1-204ENST00000563130 UBTFP17480 764 aaKnown RBP10.16□□□□□ -0.78
CNOT1-204ENST00000563130 UHRF1BP1LA0JNW5 1464 aa10.15□□□□□ -0.78
CNOT1-204ENST00000563130 UACAQ9BZF9 1416 aa10.15□□□□□ -0.78
CNOT1-204ENST00000563130 TTBK1Q5TCY1 1321 aaPredicted RBP10.13□□□□□ -0.79
CNOT1-204ENST00000563130 ZNF219Q9P2Y4 722 aaPredicted RBP10.13□□□□□ -0.79
CNOT1-204ENST00000563130 ABCC2Q92887 1545 aa10.13□□□□□ -0.79
CNOT1-204ENST00000563130 EFCAB5A4FU69 1503 aa10.13□□□□□ -0.79
CNOT1-204ENST00000563130 PLB1Q6P1J6 1458 aa10.12□□□□□ -0.79
CNOT1-204ENST00000563130 P3H3Q8IVL6 736 aa10.12□□□□□ -0.79
CNOT1-204ENST00000563130 ABCA8O94911 1581 aa10.11□□□□□ -0.79
CNOT1-204ENST00000563130 MAPKBP1O60336 1514 aa10.11□□□□□ -0.79
CNOT1-204ENST00000563130 TRHP20396 242 aaPredicted RBP10.11□□□□□ -0.79
CNOT1-204ENST00000563130 KDM5BQ9UGL1 1544 aa10.11□□□□□ -0.79
CNOT1-204ENST00000563130 NPM1P06748 294 aaKnown RBP eCLIP10.1□□□□□ -0.79
CNOT1-204ENST00000563130 RANGAP1P46060 587 aaPredicted RBP10.1□□□□□ -0.79
CNOT1-204ENST00000563130 FHOD3Q2V2M9 1422 aa10.1□□□□□ -0.79
CNOT1-204ENST00000563130 ARHGAP35Q9NRY4 1499 aa10.09□□□□□ -0.79
CNOT1-204ENST00000563130 ATF5Q9Y2D1 282 aaPredicted RBP10.09□□□□□ -0.79
CNOT1-204ENST00000563130 ABCC10Q5T3U5 1492 aa10.06□□□□□ -0.8
CNOT1-204ENST00000563130 ASXL2Q76L83 1435 aa10.05□□□□□ -0.8
CNOT1-204ENST00000563130 ZCCHC11Q5TAX3 1644 aaKnown RBP10.05□□□□□ -0.8
CNOT1-204ENST00000563130 RAPGEF6Q8TEU7 1601 aa10.04□□□□□ -0.8
CNOT1-204ENST00000563130 NUP153P49790 1475 aaKnown RBP10.04□□□□□ -0.8
CNOT1-204ENST00000563130 FMN1Q68DA7 1419 aa10.03□□□□□ -0.8
CNOT1-204ENST00000563130 ATP10BO94823 1461 aa10.03□□□□□ -0.8
CNOT1-204ENST00000563130 DIP2BQ9P265 1576 aa10.03□□□□□ -0.8
CNOT1-204ENST00000563130 CLIP1P30622 1438 aa10.03□□□□□ -0.8
CNOT1-204ENST00000563130 KIF13AQ9H1H9 1805 aa10.03□□□□□ -0.8
CNOT1-204ENST00000563130 LOC105371045A0A1W2PR82 267 aa10.03□□□□□ -0.8
CNOT1-204ENST00000563130 FAM69CQ0P6D2 419 aa10.01□□□□□ -0.81
CNOT1-204ENST00000563130 WDR7Q9Y4E6 1490 aa10□□□□□ -0.81
CNOT1-204ENST00000563130 EPRSP07814 1512 aaKnown RBP10□□□□□ -0.81
CNOT1-204ENST00000563130 DSG3P32926 999 aa10□□□□□ -0.81
CNOT1-204ENST00000563130 GLI2P10070 1586 aa9.99□□□□□ -0.81
CNOT1-204ENST00000563130 CEP162Q5TB80 1403 aa9.99□□□□□ -0.81
CNOT1-204ENST00000563130 ARID3CA6NKF2 412 aa9.98□□□□□ -0.81
CNOT1-204ENST00000563130 CASKIN1Q8WXD9 1431 aa9.97□□□□□ -0.81
CNOT1-204ENST00000563130 HECW1Q76N89 1606 aa9.96□□□□□ -0.81
CNOT1-204ENST00000563130 ABCB7O75027 752 aa9.95□□□□□ -0.82
CNOT1-204ENST00000563130 CDK13Q14004 1512 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms