RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 CHMP7Q8WUX9 453 aaPredicted RBP22.22■■□□□ 1.15
SPG7-206ENST00000562775 ARHGAP35Q9NRY4 1499 aa22.19■■□□□ 1.14
SPG7-206ENST00000562775 FBLN2P98095 1184 aa22.15■■□□□ 1.14
SPG7-206ENST00000562775 ARAP1Q96P48 1450 aa22.15■■□□□ 1.14
SPG7-206ENST00000562775 VPS8Q8N3P4 1428 aa22.14■■□□□ 1.14
SPG7-206ENST00000562775 EFCAB5A4FU69 1503 aa22.13■■□□□ 1.13
SPG7-206ENST00000562775 IQGAP2Q13576 1575 aa22.13■■□□□ 1.13
SPG7-206ENST00000562775 KIAA0586Q9BVV6 1533 aa22.13■■□□□ 1.13
SPG7-206ENST00000562775 NUP160Q12769 1436 aa22.11■■□□□ 1.13
SPG7-206ENST00000562775 CEP170Q5SW79 1584 aa22.09■■□□□ 1.13
SPG7-206ENST00000562775 SAMD9Q5K651 1589 aa22.06■■□□□ 1.12
SPG7-206ENST00000562775 CHD1O14646 1710 aa22.05■■□□□ 1.12
SPG7-206ENST00000562775 UGGT2Q9NYU1 1516 aa22.04■■□□□ 1.12
SPG7-206ENST00000562775 P3H3Q8IVL6 736 aa22.01■■□□□ 1.11
SPG7-206ENST00000562775 FHOD3Q2V2M9 1422 aa22■■□□□ 1.11
SPG7-206ENST00000562775 FMN1Q68DA7 1419 aa21.93■■□□□ 1.1
SPG7-206ENST00000562775 APLP2Q06481 763 aa21.92■■□□□ 1.1
SPG7-206ENST00000562775 JPH4Q96JJ6 628 aa21.92■■□□□ 1.1
SPG7-206ENST00000562775 DISP1Q96F81 1524 aa21.92■■□□□ 1.1
SPG7-206ENST00000562775 KIAA0556O60303 1618 aa21.9■■□□□ 1.1
SPG7-206ENST00000562775 CARMIL2Q6F5E8 1435 aa21.87■■□□□ 1.09
SPG7-206ENST00000562775 PPARGC1BQ86YN6 1023 aaKnown RBP21.87■■□□□ 1.09
SPG7-206ENST00000562775 CASKIN1Q8WXD9 1431 aa21.86■■□□□ 1.09
SPG7-206ENST00000562775 PCF11O94913 1555 aaKnown RBP21.86■■□□□ 1.09
SPG7-206ENST00000562775 FYCO1Q9BQS8 1478 aa21.85■■□□□ 1.09
SPG7-206ENST00000562775 CLASP1Q7Z460 1538 aa21.83■■□□□ 1.08
SPG7-206ENST00000562775 SHROOM2Q13796 1616 aa21.82■■□□□ 1.08
SPG7-206ENST00000562775 MAP3K1Q13233 1512 aa21.81■■□□□ 1.08
SPG7-206ENST00000562775 TRIM26Q12899 539 aaPredicted RBP21.8■■□□□ 1.08
SPG7-206ENST00000562775 PRG4Q92954 1404 aaPredicted RBP21.79■■□□□ 1.08
SPG7-206ENST00000562775 ATP1B4Q9UN42 357 aaPredicted RBP21.76■■□□□ 1.07
SPG7-206ENST00000562775 TIAM1Q13009 1591 aa21.76■■□□□ 1.07
SPG7-206ENST00000562775 CFAP43Q8NDM7 1665 aa21.72■■□□□ 1.07
SPG7-206ENST00000562775 KANK4Q5T7N3 995 aaPredicted RBP21.72■■□□□ 1.07
SPG7-206ENST00000562775 TTBK1Q5TCY1 1321 aaPredicted RBP21.72■■□□□ 1.07
SPG7-206ENST00000562775 OSCARQ8IYS5 282 aa21.71■■□□□ 1.07
SPG7-206ENST00000562775 HECW1Q76N89 1606 aa21.71■■□□□ 1.07
SPG7-206ENST00000562775 PCGF6Q9BYE7 350 aa21.7■■□□□ 1.06
SPG7-206ENST00000562775 RAPGEF6Q8TEU7 1601 aa21.67■■□□□ 1.06
SPG7-206ENST00000562775 CCDC18Q5T9S5 1454 aa21.66■■□□□ 1.06
SPG7-206ENST00000562775 LRRC9Q6ZRR7 1453 aa21.66■■□□□ 1.06
SPG7-206ENST00000562775 LRRIQ1Q96JM4 1722 aa21.66■■□□□ 1.06
SPG7-206ENST00000562775 PTPRGP23470 1445 aa21.65■■□□□ 1.06
SPG7-206ENST00000562775 ERCC6L2Q5T890 1561 aa21.63■■□□□ 1.05
SPG7-206ENST00000562775 EPRSP07814 1512 aaKnown RBP21.63■■□□□ 1.05
SPG7-206ENST00000562775 PLB1Q6P1J6 1458 aa21.62■■□□□ 1.05
SPG7-206ENST00000562775 NUP153P49790 1475 aaKnown RBP21.62■■□□□ 1.05
SPG7-206ENST00000562775 ABCA8O94911 1581 aa21.61■■□□□ 1.05
SPG7-206ENST00000562775 CDK13Q14004 1512 aaKnown RBP21.56■■□□□ 1.04
SPG7-206ENST00000562775 MTUS2Q5JR59 1369 aa21.55■■□□□ 1.04
SPG7-206ENST00000562775 EHBP1L1Q8N3D4 1523 aa21.53■■□□□ 1.04
SPG7-206ENST00000562775 UACAQ9BZF9 1416 aa21.52■■□□□ 1.04
SPG7-206ENST00000562775 ARID3CA6NKF2 412 aa21.5■■□□□ 1.03
SPG7-206ENST00000562775 MAGI3Q5TCQ9 1506 aa21.5■■□□□ 1.03
SPG7-206ENST00000562775 CDK11AQ9UQ88 783 aaPredicted RBP21.48■■□□□ 1.03
SPG7-206ENST00000562775 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.47■■□□□ 1.03
SPG7-206ENST00000562775 HNRNPUL2Q1KMD3 747 aaKnown RBP21.47■■□□□ 1.03
SPG7-206ENST00000562775 ABCC2Q92887 1545 aa21.46■■□□□ 1.03
SPG7-206ENST00000562775 ATP10BO94823 1461 aa21.45■■□□□ 1.03
SPG7-206ENST00000562775 SUPT6HQ7KZ85 1726 aaKnown RBP21.45■■□□□ 1.02
SPG7-206ENST00000562775 RRBP1Q9P2E9 1410 aaKnown RBP21.45■■□□□ 1.02
SPG7-206ENST00000562775 PHLDB1Q86UU1 1377 aa21.44■■□□□ 1.02
SPG7-206ENST00000562775 UHRF1BP1LA0JNW5 1464 aa21.43■■□□□ 1.02
SPG7-206ENST00000562775 NCOA2Q15596 1464 aa21.43■■□□□ 1.02
SPG7-206ENST00000562775 TROQ12816 1431 aaPredicted RBP21.4■■□□□ 1.02
SPG7-206ENST00000562775 ARHGEF11O15085 1522 aa21.4■■□□□ 1.02
SPG7-206ENST00000562775 CCNB3Q8WWL7 1395 aa21.39■■□□□ 1.01
SPG7-206ENST00000562775 PLEKHD1A6NEE1 506 aa21.38■■□□□ 1.01
SPG7-206ENST00000562775 KDM5BQ9UGL1 1544 aa21.34■■□□□ 1.01
SPG7-206ENST00000562775 MYOM3Q5VTT5 1437 aa21.34■■□□□ 1.01
SPG7-206ENST00000562775 ADCY10Q96PN6 1610 aa21.33■■□□□ 1
SPG7-206ENST00000562775 FGD6Q6ZV73 1430 aa21.32■■□□□ 1
SPG7-206ENST00000562775 ZCCHC11Q5TAX3 1644 aaKnown RBP21.3■■□□□ 1
SPG7-206ENST00000562775 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.29■■□□□ 1
SPG7-206ENST00000562775 KIF14Q15058 1648 aa21.27■■□□□ 1
SPG7-206ENST00000562775 MIA2Q96PC5 1412 aa21.26■□□□□ 0.99
SPG7-206ENST00000562775 FAM50AQ14320 339 aaKnown RBP21.24■□□□□ 0.99
SPG7-206ENST00000562775 RIMBP3CA6NJZ7 1639 aa21.23■□□□□ 0.99
SPG7-206ENST00000562775 RIMBP3BA6NNM3 1639 aa21.23■□□□□ 0.99
SPG7-206ENST00000562775 RIMBP3Q9UFD9 1639 aa21.23■□□□□ 0.99
SPG7-206ENST00000562775 ABCC10Q5T3U5 1492 aa21.22■□□□□ 0.99
SPG7-206ENST00000562775 PTPN23Q9H3S7 1636 aa21.21■□□□□ 0.99
SPG7-206ENST00000562775 TCOF1Q13428 1488 aaKnown RBP21.2■□□□□ 0.98
SPG7-206ENST00000562775 ITSN2Q9NZM3 1697 aa21.2■□□□□ 0.98
SPG7-206ENST00000562775 GPATCH8Q9UKJ3 1502 aaKnown RBP21.19■□□□□ 0.98
SPG7-206ENST00000562775 NPM1P06748 294 aaKnown RBP eCLIP21.17■□□□□ 0.98
SPG7-206ENST00000562775 ITGAEP38570 1179 aa21.15■□□□□ 0.98
SPG7-206ENST00000562775 CDC42BPAQ5VT25 1732 aa21.14■□□□□ 0.97
SPG7-206ENST00000562775 CFDP1Q9UEE9 299 aaPredicted RBP21.14■□□□□ 0.97
SPG7-206ENST00000562775 WDR7Q9Y4E6 1490 aa21.13■□□□□ 0.97
SPG7-206ENST00000562775 CYB5RLQ6IPT4 315 aa21.13■□□□□ 0.97
SPG7-206ENST00000562775 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.12■□□□□ 0.97
SPG7-206ENST00000562775 KCNH8Q96L42 1107 aa21.11■□□□□ 0.97
SPG7-206ENST00000562775 ASXL2Q76L83 1435 aa21.1■□□□□ 0.97
SPG7-206ENST00000562775 TTC37Q6PGP7 1564 aa21.09■□□□□ 0.97
SPG7-206ENST00000562775 PREX2Q70Z35 1606 aa21.07■□□□□ 0.96
SPG7-206ENST00000562775 CAMSAP2Q08AD1 1489 aa21.06■□□□□ 0.96
SPG7-206ENST00000562775 ZNF644Q9H582 1327 aaPredicted RBP21.06■□□□□ 0.96
SPG7-206ENST00000562775 CDC42BPBQ9Y5S2 1711 aa21.05■□□□□ 0.96
SPG7-206ENST00000562775 MYO5CQ9NQX4 1742 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms