RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 AEBP2Q6ZN18 517 aaPredicted RBP28.56■■■□□ 2.16
CDT1-202ENST00000562747 ADCY10Q96PN6 1610 aa28.48■■■□□ 2.15
CDT1-202ENST00000562747 CUL7Q14999 1698 aa28.45■■■□□ 2.15
CDT1-202ENST00000562747 IGF1RP08069 1367 aa28.43■■■□□ 2.14
CDT1-202ENST00000562747 MAPKBP1O60336 1514 aa28.43■■■□□ 2.14
CDT1-202ENST00000562747 ABCC10Q5T3U5 1492 aa28.42■■■□□ 2.14
CDT1-202ENST00000562747 KIAA0586Q9BVV6 1533 aa28.42■■■□□ 2.14
CDT1-202ENST00000562747 DIP2BQ9P265 1576 aa28.41■■■□□ 2.14
CDT1-202ENST00000562747 KIF27Q86VH2 1401 aa28.38■■■□□ 2.13
CDT1-202ENST00000562747 FAM69CQ0P6D2 419 aa28.33■■■□□ 2.13
CDT1-202ENST00000562747 NPM1P06748 294 aaKnown RBP eCLIP28.28■■■□□ 2.12
CDT1-202ENST00000562747 CARMIL1Q5VZK9 1371 aa28.22■■■□□ 2.11
CDT1-202ENST00000562747 TSPOAP1O95153 1857 aa28.21■■■□□ 2.11
CDT1-202ENST00000562747 KDM6BO15054 1643 aa28.19■■■□□ 2.1
CDT1-202ENST00000562747 PTPRGP23470 1445 aa28.17■■■□□ 2.1
CDT1-202ENST00000562747 IQGAP2Q13576 1575 aa28.16■■■□□ 2.1
CDT1-202ENST00000562747 TTBK1Q5TCY1 1321 aaPredicted RBP28.12■■■□□ 2.09
CDT1-202ENST00000562747 ABCC2Q92887 1545 aa28.11■■■□□ 2.09
CDT1-202ENST00000562747 TNIKQ9UKE5 1360 aa28.11■■■□□ 2.09
CDT1-202ENST00000562747 CARMIL2Q6F5E8 1435 aa28.09■■■□□ 2.09
CDT1-202ENST00000562747 DISP1Q96F81 1524 aa28.07■■■□□ 2.08
CDT1-202ENST00000562747 PPRC1Q5VV67 1664 aaKnown RBP28.06■■■□□ 2.08
CDT1-202ENST00000562747 ASXL2Q76L83 1435 aa28.03■■■□□ 2.08
CDT1-202ENST00000562747 UHRF1BP1LA0JNW5 1464 aa28.02■■■□□ 2.08
CDT1-202ENST00000562747 GLI2P10070 1586 aa28■■■□□ 2.07
CDT1-202ENST00000562747 UGGT2Q9NYU1 1516 aa27.97■■■□□ 2.07
CDT1-202ENST00000562747 PLB1Q6P1J6 1458 aa27.97■■■□□ 2.07
CDT1-202ENST00000562747 UACAQ9BZF9 1416 aa27.97■■■□□ 2.07
CDT1-202ENST00000562747 KDM4FA0A1W2PPD8 638 aa27.96■■■□□ 2.07
CDT1-202ENST00000562747 RAPGEF2Q9Y4G8 1499 aa27.95■■■□□ 2.07
CDT1-202ENST00000562747 KIAA0556O60303 1618 aa27.95■■■□□ 2.06
CDT1-202ENST00000562747 ZCCHC11Q5TAX3 1644 aaKnown RBP27.92■■■□□ 2.06
CDT1-202ENST00000562747 KDM5BQ9UGL1 1544 aa27.92■■■□□ 2.06
CDT1-202ENST00000562747 MAP3K4Q9Y6R4 1608 aa27.89■■■□□ 2.05
CDT1-202ENST00000562747 EPRSP07814 1512 aaKnown RBP27.87■■■□□ 2.05
CDT1-202ENST00000562747 CTTNBP2Q8WZ74 1663 aa27.85■■■□□ 2.05
CDT1-202ENST00000562747 COL17A1Q9UMD9 1497 aaPredicted RBP27.82■■■□□ 2.04
CDT1-202ENST00000562747 CHIC1Q5VXU3 224 aa27.81■■■□□ 2.04
CDT1-202ENST00000562747 EEA1Q15075 1411 aa27.76■■■□□ 2.04
CDT1-202ENST00000562747 PRXQ9BXM0 1461 aa27.74■■■□□ 2.03
CDT1-202ENST00000562747 ADGRL1O94910 1474 aa27.73■■■□□ 2.03
CDT1-202ENST00000562747 WDR7Q9Y4E6 1490 aa27.72■■■□□ 2.03
CDT1-202ENST00000562747 TEX14Q8IWB6 1497 aa27.71■■■□□ 2.03
CDT1-202ENST00000562747 ABCA8O94911 1581 aa27.69■■■□□ 2.02
CDT1-202ENST00000562747 CSRNP3Q8WYN3 585 aa27.69■■■□□ 2.02
CDT1-202ENST00000562747 GOLGA3Q08378 1498 aa27.65■■■□□ 2.02
CDT1-202ENST00000562747 CFAP43Q8NDM7 1665 aa27.62■■■□□ 2.01
CDT1-202ENST00000562747 MAGI3Q5TCQ9 1506 aa27.56■■■□□ 2
CDT1-202ENST00000562747 CD109Q6YHK3 1445 aa27.54■■■□□ 2
CDT1-202ENST00000562747 FAM9AQ8IZU1 332 aaPredicted RBP27.53■■■□□ 2
CDT1-202ENST00000562747 KCNH8Q96L42 1107 aa27.49■■□□□ 1.99
CDT1-202ENST00000562747 KIF21BO75037 1637 aa27.46■■□□□ 1.99
CDT1-202ENST00000562747 HECW2Q9P2P5 1572 aa27.45■■□□□ 1.99
CDT1-202ENST00000562747 SAMD9Q5K651 1589 aa27.43■■□□□ 1.98
CDT1-202ENST00000562747 ATP10BO94823 1461 aa27.41■■□□□ 1.98
CDT1-202ENST00000562747 ARID3CA6NKF2 412 aa27.41■■□□□ 1.98
CDT1-202ENST00000562747 P3H3Q8IVL6 736 aa27.4■■□□□ 1.98
CDT1-202ENST00000562747 ABCA9Q8IUA7 1624 aa27.38■■□□□ 1.97
CDT1-202ENST00000562747 ARAP3Q8WWN8 1544 aa27.36■■□□□ 1.97
CDT1-202ENST00000562747 RAPGEF6Q8TEU7 1601 aa27.35■■□□□ 1.97
CDT1-202ENST00000562747 ILDR1Q86SU0 546 aaPredicted RBP27.32■■□□□ 1.96
CDT1-202ENST00000562747 NUP153P49790 1475 aaKnown RBP27.25■■□□□ 1.95
CDT1-202ENST00000562747 FRMPD1Q5SYB0 1578 aa27.23■■□□□ 1.95
CDT1-202ENST00000562747 FHOD3Q2V2M9 1422 aa27.19■■□□□ 1.94
CDT1-202ENST00000562747 NEO1Q92859 1461 aa27.19■■□□□ 1.94
CDT1-202ENST00000562747 ADAMTSL3P82987 1691 aa27.18■■□□□ 1.94
CDT1-202ENST00000562747 UBTFP17480 764 aaKnown RBP27.18■■□□□ 1.94
CDT1-202ENST00000562747 PHLDB1Q86UU1 1377 aa27.16■■□□□ 1.94
CDT1-202ENST00000562747 RAPGEF3O95398 923 aa27.15■■□□□ 1.94
CDT1-202ENST00000562747 EHMT2Q96KQ7 1210 aa27.14■■□□□ 1.94
CDT1-202ENST00000562747 RANGAP1P46060 587 aaPredicted RBP27.13■■□□□ 1.93
CDT1-202ENST00000562747 EFCAB5A4FU69 1503 aa27.12■■□□□ 1.93
CDT1-202ENST00000562747 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.12■■□□□ 1.93
CDT1-202ENST00000562747 HNRNPUL2Q1KMD3 747 aaKnown RBP27.12■■□□□ 1.93
CDT1-202ENST00000562747 BCORL1Q5H9F3 1711 aa27.1■■□□□ 1.93
CDT1-202ENST00000562747 PTPRMP28827 1452 aa27.09■■□□□ 1.93
CDT1-202ENST00000562747 RICTORQ6R327 1708 aa27.07■■□□□ 1.92
CDT1-202ENST00000562747 MADDQ8WXG6 1647 aa27.07■■□□□ 1.92
CDT1-202ENST00000562747 ARHGEF40Q8TER5 1519 aa27.06■■□□□ 1.92
CDT1-202ENST00000562747 TTC37Q6PGP7 1564 aa27.05■■□□□ 1.92
CDT1-202ENST00000562747 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.04■■□□□ 1.922e-6■■□□□ 13.1
CDT1-202ENST00000562747 CFAP74Q9C0B2 1584 aa27.01■■□□□ 1.91
CDT1-202ENST00000562747 FANCAO15360 1455 aa26.99■■□□□ 1.91
CDT1-202ENST00000562747 CDK13Q14004 1512 aaKnown RBP26.98■■□□□ 1.91
CDT1-202ENST00000562747 SIGLEC1Q9BZZ2 1709 aa26.98■■□□□ 1.91
CDT1-202ENST00000562747 DENND4BO75064 1496 aaPredicted RBP26.98■■□□□ 1.91
CDT1-202ENST00000562747 AKNAQ7Z591 1439 aa26.98■■□□□ 1.91
CDT1-202ENST00000562747 RIMS1Q86UR5 1692 aaKnown RBP26.96■■□□□ 1.91
CDT1-202ENST00000562747 PLEKHD1A6NEE1 506 aa26.96■■□□□ 1.91
CDT1-202ENST00000562747 ARHGAP35Q9NRY4 1499 aa26.94■■□□□ 1.9
CDT1-202ENST00000562747 ZMYM4Q5VZL5 1548 aa26.94■■□□□ 1.9
CDT1-202ENST00000562747 ARID4BQ4LE39 1312 aaPredicted RBP26.93■■□□□ 1.9
CDT1-202ENST00000562747 PCF11O94913 1555 aaKnown RBP26.92■■□□□ 1.9
CDT1-202ENST00000562747 LMTK3Q96Q04 1460 aa26.9■■□□□ 1.9
CDT1-202ENST00000562747 ZFYVE16Q7Z3T8 1539 aa26.88■■□□□ 1.89
CDT1-202ENST00000562747 YEATS2Q9ULM3 1422 aa26.88■■□□□ 1.89
CDT1-202ENST00000562747 FMN1Q68DA7 1419 aa26.86■■□□□ 1.89
CDT1-202ENST00000562747 HECW1Q76N89 1606 aa26.86■■□□□ 1.89
CDT1-202ENST00000562747 PLCH2O75038 1416 aa26.8■■□□□ 1.88
CDT1-202ENST00000562747 POGZQ7Z3K3 1410 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms