RNA–Protein interactions for RNA: ENST00000562212.5

SCAMP5-203, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 1 (best) BASIC

Gene SCAMP5, Length 3,400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-203ENST00000562212 KCNH8Q96L42 1107 aa17.91■□□□□ 0.46
SCAMP5-203ENST00000562212 DHX57Q6P158 1386 aaKnown RBP17.91■□□□□ 0.46
SCAMP5-203ENST00000562212 ARHGAP35Q9NRY4 1499 aa17.89■□□□□ 0.45
SCAMP5-203ENST00000562212 BCANQ96GW7 911 aa17.89■□□□□ 0.45
SCAMP5-203ENST00000562212 RRP7BPQ9NSQ0 103 aa17.88■□□□□ 0.45
SCAMP5-203ENST00000562212 FANCD2Q9BXW9 1451 aa17.87■□□□□ 0.45
SCAMP5-203ENST00000562212 RAB3GAP2Q9H2M9 1393 aa17.85■□□□□ 0.45
SCAMP5-203ENST00000562212 CC2D2AQ9P2K1 1620 aa17.83■□□□□ 0.45
SCAMP5-203ENST00000562212 POLR3GLQ9BT43 218 aa17.82■□□□□ 0.44
SCAMP5-203ENST00000562212 MTUS2Q5JR59 1369 aa17.8■□□□□ 0.44
SCAMP5-203ENST00000562212 PHLDB1Q86UU1 1377 aa17.8■□□□□ 0.44
SCAMP5-203ENST00000562212 HMGXB3Q12766 1538 aa17.79■□□□□ 0.44
SCAMP5-203ENST00000562212 ZNF777Q9ULD5 760 aaPredicted RBP17.77■□□□□ 0.44
SCAMP5-203ENST00000562212 FOXD1Q16676 465 aa17.76■□□□□ 0.43
SCAMP5-203ENST00000562212 SENP3-EIF4A1A0A087X0R7 540 aa17.72■□□□□ 0.43
SCAMP5-203ENST00000562212 BIVM-ERCC5R4GMW8 1640 aa17.72■□□□□ 0.43
SCAMP5-203ENST00000562212 ZNF326Q5BKZ1 582 aaKnown RBP17.72■□□□□ 0.43
SCAMP5-203ENST00000562212 ERICH3Q5RHP9 1530 aa17.7■□□□□ 0.42
SCAMP5-203ENST00000562212 SETD5Q9C0A6 1442 aa17.66■□□□□ 0.42
SCAMP5-203ENST00000562212 POLA1P09884 1462 aaPredicted RBP17.66■□□□□ 0.42
SCAMP5-203ENST00000562212 PELP1Q8IZL8 1130 aaKnown RBP17.66■□□□□ 0.42
SCAMP5-203ENST00000562212 TONSLQ96HA7 1378 aa17.63■□□□□ 0.41
SCAMP5-203ENST00000562212 FHAD1B1AJZ9 1412 aa17.62■□□□□ 0.41
SCAMP5-203ENST00000562212 TOPBP1Q92547 1522 aa17.61■□□□□ 0.41
SCAMP5-203ENST00000562212 AQRO60306 1485 aaKnown RBP eCLIP17.61■□□□□ 0.41
SCAMP5-203ENST00000562212 LRRC9Q6ZRR7 1453 aa17.6■□□□□ 0.41
SCAMP5-203ENST00000562212 RRBP1Q9P2E9 1410 aaKnown RBP17.6■□□□□ 0.41
SCAMP5-203ENST00000562212 ANP32CO43423 234 aa17.56■□□□□ 0.4
SCAMP5-203ENST00000562212 CHMP7Q8WUX9 453 aaPredicted RBP17.56■□□□□ 0.4
SCAMP5-203ENST00000562212 CLSPNQ9HAW4 1339 aa17.55■□□□□ 0.4
SCAMP5-203ENST00000562212 IRX6P78412 446 aaPredicted RBP17.54■□□□□ 0.4
SCAMP5-203ENST00000562212 ZNF644Q9H582 1327 aaPredicted RBP17.53■□□□□ 0.4
SCAMP5-203ENST00000562212 FKBP8Q14318 412 aa17.52■□□□□ 0.4
SCAMP5-203ENST00000562212 GAPVD1Q14C86 1478 aa17.52■□□□□ 0.4
SCAMP5-203ENST00000562212 PDS5BQ9NTI5 1447 aa17.52■□□□□ 0.39
SCAMP5-203ENST00000562212 TIAM1Q13009 1591 aa17.51■□□□□ 0.39
SCAMP5-203ENST00000562212 PPP1R15AO75807 674 aaPredicted RBP17.5■□□□□ 0.39
SCAMP5-203ENST00000562212 URB2Q14146 1524 aaKnown RBP17.5■□□□□ 0.39
SCAMP5-203ENST00000562212 PCF11O94913 1555 aaKnown RBP17.49■□□□□ 0.39
SCAMP5-203ENST00000562212 SUPT16HQ9Y5B9 1047 aaKnown RBP17.46■□□□□ 0.39
SCAMP5-203ENST00000562212 SLC4A1APQ9BWU0 796 aaKnown RBP17.44■□□□□ 0.38
SCAMP5-203ENST00000562212 FMN1Q68DA7 1419 aa17.44■□□□□ 0.38
SCAMP5-203ENST00000562212 NEFLP07196 543 aa17.43■□□□□ 0.38
SCAMP5-203ENST00000562212 KDM2AQ9Y2K7 1162 aa17.43■□□□□ 0.38
SCAMP5-203ENST00000562212 FAM9BQ8IZU0 186 aa17.43■□□□□ 0.38
SCAMP5-203ENST00000562212 WDR97A6NE52 1622 aa17.42■□□□□ 0.38
SCAMP5-203ENST00000562212 HNRNPUQ00839 825 aaKnown RBP eCLIP17.42■□□□□ 0.38
SCAMP5-203ENST00000562212 DNMBPQ6XZF7 1577 aa17.42■□□□□ 0.38
SCAMP5-203ENST00000562212 ABCA10Q8WWZ4 1543 aa17.41■□□□□ 0.38
SCAMP5-203ENST00000562212 FGD6Q6ZV73 1430 aa17.41■□□□□ 0.38
SCAMP5-203ENST00000562212 PTPRKQ15262 1439 aa17.39■□□□□ 0.37
SCAMP5-203ENST00000562212 CFDP1Q9UEE9 299 aaPredicted RBP17.38■□□□□ 0.37
SCAMP5-203ENST00000562212 CASKIN1Q8WXD9 1431 aa17.38■□□□□ 0.37
SCAMP5-203ENST00000562212 HSPA5P11021 654 aaKnown RBP17.37■□□□□ 0.37
SCAMP5-203ENST00000562212 ERCC6Q03468 1493 aa17.37■□□□□ 0.37
SCAMP5-203ENST00000562212 MPHOSPH9Q99550 1183 aa17.37■□□□□ 0.37
SCAMP5-203ENST00000562212 L3MBTL2Q969R5 705 aa17.36■□□□□ 0.37
SCAMP5-203ENST00000562212 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.36■□□□□ 0.37
SCAMP5-203ENST00000562212 MAPKBP1O60336 1514 aa17.36■□□□□ 0.37
SCAMP5-203ENST00000562212 CCDC18Q5T9S5 1454 aa17.35■□□□□ 0.37
SCAMP5-203ENST00000562212 NCOA2Q15596 1464 aa17.35■□□□□ 0.37
SCAMP5-203ENST00000562212 MYT1LQ9UL68 1186 aa17.34■□□□□ 0.37
SCAMP5-203ENST00000562212 CDK11AQ9UQ88 783 aaPredicted RBP17.34■□□□□ 0.37
SCAMP5-203ENST00000562212 ZNF608Q9ULD9 1512 aaPredicted RBP17.33■□□□□ 0.36
SCAMP5-203ENST00000562212 CDK13Q14004 1512 aaKnown RBP17.32■□□□□ 0.36
SCAMP5-203ENST00000562212 SALL2Q9Y467 1007 aaPredicted RBP17.3■□□□□ 0.36
SCAMP5-203ENST00000562212 EIF4G2P78344 907 aaKnown RBP eCLIP17.29■□□□□ 0.36
SCAMP5-203ENST00000562212 FYCO1Q9BQS8 1478 aa17.29■□□□□ 0.36
SCAMP5-203ENST00000562212 RGL3Q3MIN7 710 aa17.29■□□□□ 0.36
SCAMP5-203ENST00000562212 MYOM3Q5VTT5 1437 aa17.27■□□□□ 0.36
SCAMP5-203ENST00000562212 JPH4Q96JJ6 628 aa17.25■□□□□ 0.35
SCAMP5-203ENST00000562212 CCDC184Q52MB2 194 aa17.24■□□□□ 0.35
SCAMP5-203ENST00000562212 PLEKHD1A6NEE1 506 aa17.24■□□□□ 0.35
SCAMP5-203ENST00000562212 HNRNPMP52272 730 aaKnown RBP eCLIP17.24■□□□□ 0.35
SCAMP5-203ENST00000562212 SENP3Q9H4L4 574 aaPredicted RBP17.24■□□□□ 0.35
SCAMP5-203ENST00000562212 MRS2Q9HD23 443 aa17.23■□□□□ 0.35
SCAMP5-203ENST00000562212 NAIPQ13075 1403 aa17.22■□□□□ 0.35
SCAMP5-203ENST00000562212 PKD2Q13563 968 aa17.21■□□□□ 0.35
SCAMP5-203ENST00000562212 C11orf95C9JLR9 678 aaPredicted RBP17.21■□□□□ 0.34
SCAMP5-203ENST00000562212 PRDM2Q13029 1718 aa17.2■□□□□ 0.34
SCAMP5-203ENST00000562212 NBPF8Q3BBV2 869 aa17.19■□□□□ 0.34
SCAMP5-203ENST00000562212 KIF21AQ7Z4S6 1674 aa17.19■□□□□ 0.34
SCAMP5-203ENST00000562212 PRG4Q92954 1404 aaPredicted RBP17.18■□□□□ 0.34
SCAMP5-203ENST00000562212 LAMC3Q9Y6N6 1575 aa17.18■□□□□ 0.34
SCAMP5-203ENST00000562212 TSPY4P0CV99 314 aa17.18■□□□□ 0.34
SCAMP5-203ENST00000562212 TSPY10P0CW01 314 aa17.18■□□□□ 0.34
SCAMP5-203ENST00000562212 WASHC2AQ641Q2 1341 aa17.17■□□□□ 0.34
SCAMP5-203ENST00000562212 SNAPC4Q5SXM2 1469 aa17.17■□□□□ 0.34
SCAMP5-203ENST00000562212 UACAQ9BZF9 1416 aa17.17■□□□□ 0.34
SCAMP5-203ENST00000562212 EFCAB5A4FU69 1503 aa17.16■□□□□ 0.34
SCAMP5-203ENST00000562212 TIMELESSQ9UNS1 1208 aa17.14■□□□□ 0.33
SCAMP5-203ENST00000562212 HFM1A2PYH4 1435 aa17.13■□□□□ 0.33
SCAMP5-203ENST00000562212 EPRSP07814 1512 aaKnown RBP17.12■□□□□ 0.33
SCAMP5-203ENST00000562212 MAGI3Q5TCQ9 1506 aa17.12■□□□□ 0.33
SCAMP5-203ENST00000562212 MAP3K1Q13233 1512 aa17.12■□□□□ 0.33
SCAMP5-203ENST00000562212 DCAF11Q8TEB1 546 aa17.12■□□□□ 0.33
SCAMP5-203ENST00000562212 GRIN2BQ13224 1484 aa17.12■□□□□ 0.33
SCAMP5-203ENST00000562212 CUL7Q14999 1698 aa17.11■□□□□ 0.33
SCAMP5-203ENST00000562212 TSHZ2Q9NRE2 1034 aa17.11■□□□□ 0.33
SCAMP5-203ENST00000562212 PLB1Q6P1J6 1458 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms