RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 ABCA10Q8WWZ4 1543 aa27.14■■□□□ 1.94
BBS4-204ENST00000562084 TDRD9Q8NDG6 1382 aaKnown RBP27.09■■□□□ 1.93
BBS4-204ENST00000562084 SUPT16HQ9Y5B9 1047 aaKnown RBP27.09■■□□□ 1.93
BBS4-204ENST00000562084 DHX57Q6P158 1386 aaKnown RBP27.09■■□□□ 1.93
BBS4-204ENST00000562084 AQRO60306 1485 aaKnown RBP eCLIP27.07■■□□□ 1.922e-6■■■■■ 31
BBS4-204ENST00000562084 EIF4G3O43432 1585 aaKnown RBP27.04■■□□□ 1.92
BBS4-204ENST00000562084 RAPGEF2Q9Y4G8 1499 aa27.04■■□□□ 1.92
BBS4-204ENST00000562084 ERICH3Q5RHP9 1530 aa27■■□□□ 1.91
BBS4-204ENST00000562084 ABCA5Q8WWZ7 1642 aa27■■□□□ 1.91
BBS4-204ENST00000562084 GAPVD1Q14C86 1478 aa26.97■■□□□ 1.91
BBS4-204ENST00000562084 KIF27Q86VH2 1401 aa26.94■■□□□ 1.9
BBS4-204ENST00000562084 RRBP1Q9P2E9 1410 aaKnown RBP26.92■■□□□ 1.9
BBS4-204ENST00000562084 PBRM1Q86U86 1689 aa26.91■■□□□ 1.9
BBS4-204ENST00000562084 GRIN2BQ13224 1484 aa26.89■■□□□ 1.89
BBS4-204ENST00000562084 TSHZ2Q9NRE2 1034 aa26.85■■□□□ 1.89
BBS4-204ENST00000562084 ARAP1Q96P48 1450 aa26.84■■□□□ 1.89
BBS4-204ENST00000562084 ANP32EQ9BTT0 268 aa26.83■■□□□ 1.89
BBS4-204ENST00000562084 PRXQ9BXM0 1461 aa26.83■■□□□ 1.89
BBS4-204ENST00000562084 IGF1RP08069 1367 aa26.8■■□□□ 1.88
BBS4-204ENST00000562084 SNAPC4Q5SXM2 1469 aa26.8■■□□□ 1.88
BBS4-204ENST00000562084 MAGI1Q96QZ7 1491 aaPredicted RBP26.76■■□□□ 1.87
BBS4-204ENST00000562084 ADAMTS12P58397 1594 aa26.7■■□□□ 1.86
BBS4-204ENST00000562084 CCNB3Q8WWL7 1395 aa26.69■■□□□ 1.86
BBS4-204ENST00000562084 CUL7Q14999 1698 aa26.67■■□□□ 1.86
BBS4-204ENST00000562084 FHAD1B1AJZ9 1412 aa26.66■■□□□ 1.86
BBS4-204ENST00000562084 SYNJ2O15056 1496 aa26.65■■□□□ 1.86
BBS4-204ENST00000562084 CHD1O14646 1710 aa26.64■■□□□ 1.86
BBS4-204ENST00000562084 FBLN2P98095 1184 aa26.64■■□□□ 1.86
BBS4-204ENST00000562084 CARMIL1Q5VZK9 1371 aa26.64■■□□□ 1.86
BBS4-204ENST00000562084 CHMP7Q8WUX9 453 aaPredicted RBP26.63■■□□□ 1.85
BBS4-204ENST00000562084 KANK4Q5T7N3 995 aaPredicted RBP26.62■■□□□ 1.85
BBS4-204ENST00000562084 MAP3K1Q13233 1512 aa26.6■■□□□ 1.85
BBS4-204ENST00000562084 GRIN2AQ12879 1464 aa26.55■■□□□ 1.84
BBS4-204ENST00000562084 MAPKBP1O60336 1514 aa26.54■■□□□ 1.84
BBS4-204ENST00000562084 RANGAP1P46060 587 aaPredicted RBP26.53■■□□□ 1.84
BBS4-204ENST00000562084 TIMELESSQ9UNS1 1208 aa26.51■■□□□ 1.83
BBS4-204ENST00000562084 ARHGAP35Q9NRY4 1499 aa26.48■■□□□ 1.83
BBS4-204ENST00000562084 RAB3GAP2Q9H2M9 1393 aa26.48■■□□□ 1.83
BBS4-204ENST00000562084 OSCARQ8IYS5 282 aa26.45■■□□□ 1.83
BBS4-204ENST00000562084 SETD5Q9C0A6 1442 aa26.44■■□□□ 1.82
BBS4-204ENST00000562084 CCER2I3L3R5 266 aa26.42■■□□□ 1.82
BBS4-204ENST00000562084 CEP170Q5SW79 1584 aa26.42■■□□□ 1.82
BBS4-204ENST00000562084 NEFLP07196 543 aa26.42■■□□□ 1.82
BBS4-204ENST00000562084 TIAM1Q13009 1591 aa26.41■■□□□ 1.82
BBS4-204ENST00000562084 NUP160Q12769 1436 aa26.41■■□□□ 1.82
BBS4-204ENST00000562084 FKBP8Q14318 412 aa26.38■■□□□ 1.81
BBS4-204ENST00000562084 KCNH8Q96L42 1107 aa26.34■■□□□ 1.81
BBS4-204ENST00000562084 PPP1R15AO75807 674 aaPredicted RBP26.32■■□□□ 1.8
BBS4-204ENST00000562084 BCL11AQ9H165 835 aa26.32■■□□□ 1.8
BBS4-204ENST00000562084 CLASP1Q7Z460 1538 aa26.32■■□□□ 1.8
BBS4-204ENST00000562084 CTTNBP2Q8WZ74 1663 aa26.28■■□□□ 1.8
BBS4-204ENST00000562084 KIAA0586Q9BVV6 1533 aa26.28■■□□□ 1.8
BBS4-204ENST00000562084 LRRC9Q6ZRR7 1453 aa26.27■■□□□ 1.8
BBS4-204ENST00000562084 RBM19Q9Y4C8 960 aaKnown RBP26.27■■□□□ 1.8
BBS4-204ENST00000562084 DDX10Q13206 875 aaKnown RBP26.25■■□□□ 1.79
BBS4-204ENST00000562084 BCANQ96GW7 911 aa26.24■■□□□ 1.79
BBS4-204ENST00000562084 CFAP43Q8NDM7 1665 aa26.23■■□□□ 1.79
BBS4-204ENST00000562084 ANP32CO43423 234 aa26.21■■□□□ 1.79
BBS4-204ENST00000562084 ITGAEP38570 1179 aa26.21■■□□□ 1.79
BBS4-204ENST00000562084 IQGAP2Q13576 1575 aa26.21■■□□□ 1.79
BBS4-204ENST00000562084 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.21■■□□□ 1.79
BBS4-204ENST00000562084 JPH4Q96JJ6 628 aa26.17■■□□□ 1.78
BBS4-204ENST00000562084 SHROOM2Q13796 1616 aa26.16■■□□□ 1.78
BBS4-204ENST00000562084 PHLDB1Q86UU1 1377 aa26.13■■□□□ 1.77
BBS4-204ENST00000562084 FANCIQ9NVI1 1328 aa26.08■■□□□ 1.77
BBS4-204ENST00000562084 UGGT2Q9NYU1 1516 aa26.08■■□□□ 1.77
BBS4-204ENST00000562084 SIN3AQ96ST3 1273 aa26.08■■□□□ 1.77
BBS4-204ENST00000562084 DNAJC5Q9H3Z4 198 aa26.08■■□□□ 1.77
BBS4-204ENST00000562084 PRG4Q92954 1404 aaPredicted RBP26.08■■□□□ 1.77
BBS4-204ENST00000562084 ERCC6L2Q5T890 1561 aa26.06■■□□□ 1.76
BBS4-204ENST00000562084 ERICH6BQ5W0A0 696 aa26.04■■□□□ 1.76
BBS4-204ENST00000562084 ARHGEF11O15085 1522 aa26.02■■□□□ 1.76
BBS4-204ENST00000562084 PCF11O94913 1555 aaKnown RBP26■■□□□ 1.75
BBS4-204ENST00000562084 DISP1Q96F81 1524 aa26■■□□□ 1.75
BBS4-204ENST00000562084 FAM50AQ14320 339 aaKnown RBP26■■□□□ 1.75
BBS4-204ENST00000562084 FYCO1Q9BQS8 1478 aa25.99■■□□□ 1.75
BBS4-204ENST00000562084 TRIM52Q96A61 297 aa25.99■■□□□ 1.75
BBS4-204ENST00000562084 MYT1LQ9UL68 1186 aa25.99■■□□□ 1.75
BBS4-204ENST00000562084 RIMBP3CA6NJZ7 1639 aa25.99■■□□□ 1.75
BBS4-204ENST00000562084 RIMBP3BA6NNM3 1639 aa25.99■■□□□ 1.75
BBS4-204ENST00000562084 RIMBP3Q9UFD9 1639 aa25.99■■□□□ 1.75
BBS4-204ENST00000562084 CARMIL2Q6F5E8 1435 aa25.97■■□□□ 1.75
BBS4-204ENST00000562084 TONSLQ96HA7 1378 aa25.96■■□□□ 1.75
BBS4-204ENST00000562084 EFCAB5A4FU69 1503 aa25.96■■□□□ 1.75
BBS4-204ENST00000562084 KIAA0556O60303 1618 aa25.96■■□□□ 1.75
BBS4-204ENST00000562084 SAMD9Q5K651 1589 aa25.96■■□□□ 1.75
BBS4-204ENST00000562084 CDK11AQ9UQ88 783 aaPredicted RBP25.94■■□□□ 1.74
BBS4-204ENST00000562084 P3H3Q8IVL6 736 aa25.93■■□□□ 1.74
BBS4-204ENST00000562084 CASKIN1Q8WXD9 1431 aa25.91■■□□□ 1.74
BBS4-204ENST00000562084 UACAQ9BZF9 1416 aa25.9■■□□□ 1.74
BBS4-204ENST00000562084 MSH5O43196 834 aa25.87■■□□□ 1.73
BBS4-204ENST00000562084 CCDC18Q5T9S5 1454 aa25.86■■□□□ 1.73
BBS4-204ENST00000562084 HFM1A2PYH4 1435 aa25.86■■□□□ 1.73
BBS4-204ENST00000562084 FHOD3Q2V2M9 1422 aa25.84■■□□□ 1.73
BBS4-204ENST00000562084 FGD6Q6ZV73 1430 aa25.83■■□□□ 1.73
BBS4-204ENST00000562084 ERICH6Q7L0X2 663 aa25.83■■□□□ 1.72
BBS4-204ENST00000562084 PTPRGP23470 1445 aa25.82■■□□□ 1.72
BBS4-204ENST00000562084 PTPN23Q9H3S7 1636 aa25.81■■□□□ 1.72
BBS4-204ENST00000562084 CYB5RLQ6IPT4 315 aa25.79■■□□□ 1.72
BBS4-204ENST00000562084 HIRIP3Q9BW71 556 aaPredicted RBP25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms