RNA–Protein interactions for RNA: ENST00000561992.5

TCF4-211, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-211ENST00000561992 HMGXB3Q12766 1538 aa14.11□□□□□ -0.15
TCF4-211ENST00000561992 TIAM1Q13009 1591 aa14.08□□□□□ -0.16
TCF4-211ENST00000561992 RAB3GAP2Q9H2M9 1393 aa14.08□□□□□ -0.16
TCF4-211ENST00000561992 SETD5Q9C0A6 1442 aa14.08□□□□□ -0.16
TCF4-211ENST00000561992 CUX1P39880 1505 aa14.08□□□□□ -0.16
TCF4-211ENST00000561992 CCER2I3L3R5 266 aa14.07□□□□□ -0.16
TCF4-211ENST00000561992 NCAPD3P42695 1498 aa14.05□□□□□ -0.16
TCF4-211ENST00000561992 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.03□□□□□ -0.16
TCF4-211ENST00000561992 NEFLP07196 543 aa14.02□□□□□ -0.17
TCF4-211ENST00000561992 ARXQ96QS3 562 aa14.02□□□□□ -0.17
TCF4-211ENST00000561992 DNAJC5Q9H3Z4 198 aa14.02□□□□□ -0.17
TCF4-211ENST00000561992 LRRC9Q6ZRR7 1453 aa14.01□□□□□ -0.17
TCF4-211ENST00000561992 RANGAP1P46060 587 aaPredicted RBP14.01□□□□□ -0.17
TCF4-211ENST00000561992 CFTRP13569 1480 aa14.01□□□□□ -0.17
TCF4-211ENST00000561992 CC2D2AQ9P2K1 1620 aa14.01□□□□□ -0.17
TCF4-211ENST00000561992 FHAD1B1AJZ9 1412 aa14□□□□□ -0.17
TCF4-211ENST00000561992 PPP1R15AO75807 674 aaPredicted RBP13.99□□□□□ -0.17
TCF4-211ENST00000561992 CFAP43Q8NDM7 1665 aa13.99□□□□□ -0.17
TCF4-211ENST00000561992 SLC4A1APQ9BWU0 796 aaKnown RBP13.98□□□□□ -0.17
TCF4-211ENST00000561992 WDR97A6NE52 1622 aa13.97□□□□□ -0.17
TCF4-211ENST00000561992 PRDM2Q13029 1718 aa13.96□□□□□ -0.17
TCF4-211ENST00000561992 FKBP8Q14318 412 aa13.96□□□□□ -0.18
TCF4-211ENST00000561992 TAOK2Q9UL54 1235 aa13.95□□□□□ -0.18
TCF4-211ENST00000561992 ANP32CO43423 234 aa13.92□□□□□ -0.18
TCF4-211ENST00000561992 IGF1RP08069 1367 aa13.92□□□□□ -0.18
TCF4-211ENST00000561992 AQRO60306 1485 aaKnown RBP eCLIP13.91□□□□□ -0.18
TCF4-211ENST00000561992 DDX10Q13206 875 aaKnown RBP13.9□□□□□ -0.18
TCF4-211ENST00000561992 PHLDB1Q86UU1 1377 aa13.9□□□□□ -0.18
TCF4-211ENST00000561992 KCNH8Q96L42 1107 aa13.9□□□□□ -0.18
TCF4-211ENST00000561992 ERICH6BQ5W0A0 696 aa13.89□□□□□ -0.19
TCF4-211ENST00000561992 RBM19Q9Y4C8 960 aaKnown RBP13.89□□□□□ -0.19
TCF4-211ENST00000561992 EFCAB5A4FU69 1503 aa13.89□□□□□ -0.19
TCF4-211ENST00000561992 FYCO1Q9BQS8 1478 aa13.88□□□□□ -0.19
TCF4-211ENST00000561992 CARMIL1Q5VZK9 1371 aa13.87□□□□□ -0.19
TCF4-211ENST00000561992 ITGAEP38570 1179 aa13.87□□□□□ -0.19
TCF4-211ENST00000561992 BCL11AQ9H165 835 aa13.87□□□□□ -0.19
TCF4-211ENST00000561992 TULP1O00294 542 aaPredicted RBP13.86□□□□□ -0.19
TCF4-211ENST00000561992 FANCIQ9NVI1 1328 aa13.85□□□□□ -0.19
TCF4-211ENST00000561992 FGD5Q6ZNL6 1462 aa13.84□□□□□ -0.19
TCF4-211ENST00000561992 PCF11O94913 1555 aaKnown RBP13.84□□□□□ -0.19
TCF4-211ENST00000561992 MYT1LQ9UL68 1186 aa13.84□□□□□ -0.19
TCF4-211ENST00000561992 CASKIN1Q8WXD9 1431 aa13.84□□□□□ -0.19
TCF4-211ENST00000561992 BCANQ96GW7 911 aa13.83□□□□□ -0.2
TCF4-211ENST00000561992 SIN3AQ96ST3 1273 aa13.82□□□□□ -0.2
TCF4-211ENST00000561992 UACAQ9BZF9 1416 aa13.81□□□□□ -0.2
TCF4-211ENST00000561992 TONSLQ96HA7 1378 aa13.81□□□□□ -0.2
TCF4-211ENST00000561992 FAM50AQ14320 339 aaKnown RBP13.8□□□□□ -0.2
TCF4-211ENST00000561992 HFM1A2PYH4 1435 aa13.79□□□□□ -0.2
TCF4-211ENST00000561992 FGD6Q6ZV73 1430 aa13.77□□□□□ -0.21
TCF4-211ENST00000561992 CCDC18Q5T9S5 1454 aa13.77□□□□□ -0.21
TCF4-211ENST00000561992 FMN1Q68DA7 1419 aa13.76□□□□□ -0.21
TCF4-211ENST00000561992 CDK11AQ9UQ88 783 aaPredicted RBP13.76□□□□□ -0.21
TCF4-211ENST00000561992 CADPSQ9ULU8 1353 aa13.75□□□□□ -0.21
TCF4-211ENST00000561992 CUL7Q14999 1698 aa13.74□□□□□ -0.21
TCF4-211ENST00000561992 PTPN23Q9H3S7 1636 aa13.74□□□□□ -0.21
TCF4-211ENST00000561992 THOC2Q8NI27 1593 aaKnown RBP13.74□□□□□ -0.21
TCF4-211ENST00000561992 TRIM52Q96A61 297 aa13.73□□□□□ -0.21
TCF4-211ENST00000561992 TPRNQ4KMQ1 711 aa13.72□□□□□ -0.21
TCF4-211ENST00000561992 NCOA2Q15596 1464 aa13.7□□□□□ -0.22
TCF4-211ENST00000561992 CTTNBP2Q8WZ74 1663 aa13.7□□□□□ -0.22
TCF4-211ENST00000561992 ABCA10Q8WWZ4 1543 aa13.7□□□□□ -0.22
TCF4-211ENST00000561992 KDM5BQ9UGL1 1544 aa13.69□□□□□ -0.22
TCF4-211ENST00000561992 AKNAQ7Z591 1439 aa13.69□□□□□ -0.22
TCF4-211ENST00000561992 PPP4R2Q9NY27 417 aa13.68□□□□□ -0.22
TCF4-211ENST00000561992 SNAPC4Q5SXM2 1469 aa13.68□□□□□ -0.22
TCF4-211ENST00000561992 NAIPQ13075 1403 aa13.67□□□□□ -0.22
TCF4-211ENST00000561992 FHOD3Q2V2M9 1422 aa13.67□□□□□ -0.22
TCF4-211ENST00000561992 ERICH6Q7L0X2 663 aa13.66□□□□□ -0.22
TCF4-211ENST00000561992 MYOM3Q5VTT5 1437 aa13.66□□□□□ -0.22
TCF4-211ENST00000561992 DNMBPQ6XZF7 1577 aa13.66□□□□□ -0.22
TCF4-211ENST00000561992 MSH5O43196 834 aa13.66□□□□□ -0.22
TCF4-211ENST00000561992 EHBP1L1Q8N3D4 1523 aa13.65□□□□□ -0.22
TCF4-211ENST00000561992 HNRNPUQ00839 825 aaKnown RBP eCLIP13.65□□□□□ -0.22
TCF4-211ENST00000561992 HECW1Q76N89 1606 aa13.65□□□□□ -0.22
TCF4-211ENST00000561992 CNTLNQ9NXG0 1405 aa13.64□□□□□ -0.23
TCF4-211ENST00000561992 SAMD9Q5K651 1589 aa13.64□□□□□ -0.23
TCF4-211ENST00000561992 MTUS2Q5JR59 1369 aa13.64□□□□□ -0.23
TCF4-211ENST00000561992 KIF21AQ7Z4S6 1674 aa13.64□□□□□ -0.23
TCF4-211ENST00000561992 SUPT6HQ7KZ85 1726 aaKnown RBP13.64□□□□□ -0.23
TCF4-211ENST00000561992 GCC2Q8IWJ2 1684 aa13.63□□□□□ -0.23
TCF4-211ENST00000561992 TCOF1Q13428 1488 aaKnown RBP13.63□□□□□ -0.23
TCF4-211ENST00000561992 ARHGEF11O15085 1522 aa13.62□□□□□ -0.23
TCF4-211ENST00000561992 PTPRKQ15262 1439 aa13.62□□□□□ -0.23
TCF4-211ENST00000561992 GRIN2BQ13224 1484 aa13.61□□□□□ -0.23
TCF4-211ENST00000561992 ADRA2BP18089 450 aa13.6□□□□□ -0.23
TCF4-211ENST00000561992 HIRIP3Q9BW71 556 aaPredicted RBP13.6□□□□□ -0.23
TCF4-211ENST00000561992 UGGT2Q9NYU1 1516 aa13.6□□□□□ -0.23
TCF4-211ENST00000561992 ZBED9Q6R2W3 1325 aa13.59□□□□□ -0.23
TCF4-211ENST00000561992 ZBTB22O15209 634 aa13.59□□□□□ -0.23
TCF4-211ENST00000561992 EIF4G2P78344 907 aaKnown RBP eCLIP13.59□□□□□ -0.233e-7■■■■■ 40.1
TCF4-211ENST00000561992 PLCB2Q00722 1185 aa13.59□□□□□ -0.23
TCF4-211ENST00000561992 WASHC2AQ641Q2 1341 aa13.59□□□□□ -0.23
TCF4-211ENST00000561992 HOMEZQ8IX15 550 aa13.59□□□□□ -0.23
TCF4-211ENST00000561992 FANCD2Q9BXW9 1451 aa13.59□□□□□ -0.23
TCF4-211ENST00000561992 NCOA1Q15788 1441 aa13.57□□□□□ -0.24
TCF4-211ENST00000561992 ABCA5Q8WWZ7 1642 aa13.57□□□□□ -0.24
TCF4-211ENST00000561992 ATP1B4Q9UN42 357 aaPredicted RBP13.56□□□□□ -0.24
TCF4-211ENST00000561992 HSPA5P11021 654 aaKnown RBP13.56□□□□□ -0.24
TCF4-211ENST00000561992 POLA1P09884 1462 aaPredicted RBP13.55□□□□□ -0.24
TCF4-211ENST00000561992 TOPBP1Q92547 1522 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms