RNA–Protein interactions for RNA: ENST00000561956.1

AC009054.2-201, humanhuman

TSL 3 BASIC

Gene AC009054.2, Length 374 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009054.2-201ENST00000561956 CHD1O14646 1710 aa17.46■□□□□ 0.39
AC009054.2-201ENST00000561956 CHMP7Q8WUX9 453 aaPredicted RBP17.44■□□□□ 0.38
AC009054.2-201ENST00000561956 CEP170Q5SW79 1584 aa17.42■□□□□ 0.38
AC009054.2-201ENST00000561956 NUP160Q12769 1436 aa17.42■□□□□ 0.38
AC009054.2-201ENST00000561956 CLIP1P30622 1438 aa17.4■□□□□ 0.38
AC009054.2-201ENST00000561956 FBLN2P98095 1184 aa17.39■□□□□ 0.37
AC009054.2-201ENST00000561956 IQGAP2Q13576 1575 aa17.39■□□□□ 0.37
AC009054.2-201ENST00000561956 KIAA0586Q9BVV6 1533 aa17.38■□□□□ 0.37
AC009054.2-201ENST00000561956 EFCAB5A4FU69 1503 aa17.33■□□□□ 0.37
AC009054.2-201ENST00000561956 ARHGAP35Q9NRY4 1499 aa17.33■□□□□ 0.37
AC009054.2-201ENST00000561956 SAMD9Q5K651 1589 aa17.32■□□□□ 0.36
AC009054.2-201ENST00000561956 UGGT2Q9NYU1 1516 aa17.31■□□□□ 0.36
AC009054.2-201ENST00000561956 RANGAP1P46060 587 aaPredicted RBP17.31■□□□□ 0.36
AC009054.2-201ENST00000561956 ARAP1Q96P48 1450 aa17.3■□□□□ 0.36
AC009054.2-201ENST00000561956 CLASP1Q7Z460 1538 aa17.28■□□□□ 0.36
AC009054.2-201ENST00000561956 SHROOM2Q13796 1616 aa17.24■□□□□ 0.35
AC009054.2-201ENST00000561956 VPS8Q8N3P4 1428 aa17.22■□□□□ 0.35
AC009054.2-201ENST00000561956 DISP1Q96F81 1524 aa17.22■□□□□ 0.35
AC009054.2-201ENST00000561956 KIAA0556O60303 1618 aa17.22■□□□□ 0.35
AC009054.2-201ENST00000561956 FHOD3Q2V2M9 1422 aa17.21■□□□□ 0.35
AC009054.2-201ENST00000561956 JPH4Q96JJ6 628 aa17.19■□□□□ 0.34
AC009054.2-201ENST00000561956 P3H3Q8IVL6 736 aa17.17■□□□□ 0.34
AC009054.2-201ENST00000561956 CARMIL2Q6F5E8 1435 aa17.16■□□□□ 0.34
AC009054.2-201ENST00000561956 PRG4Q92954 1404 aaPredicted RBP17.14■□□□□ 0.33
AC009054.2-201ENST00000561956 OSCARQ8IYS5 282 aa17.14■□□□□ 0.33
AC009054.2-201ENST00000561956 FMN1Q68DA7 1419 aa17.13■□□□□ 0.33
AC009054.2-201ENST00000561956 PCF11O94913 1555 aaKnown RBP17.11■□□□□ 0.33
AC009054.2-201ENST00000561956 ERCC6L2Q5T890 1561 aa17.1■□□□□ 0.33
AC009054.2-201ENST00000561956 FYCO1Q9BQS8 1478 aa17.08■□□□□ 0.32
AC009054.2-201ENST00000561956 CASKIN1Q8WXD9 1431 aa17.08■□□□□ 0.32
AC009054.2-201ENST00000561956 HECW1Q76N89 1606 aa17.02■□□□□ 0.31
AC009054.2-201ENST00000561956 RAPGEF6Q8TEU7 1601 aa17.02■□□□□ 0.31
AC009054.2-201ENST00000561956 MAP3K1Q13233 1512 aa17.01■□□□□ 0.31
AC009054.2-201ENST00000561956 CFAP43Q8NDM7 1665 aa17.01■□□□□ 0.31
AC009054.2-201ENST00000561956 PTPRGP23470 1445 aa17■□□□□ 0.31
AC009054.2-201ENST00000561956 LRRIQ1Q96JM4 1722 aa16.99■□□□□ 0.31
AC009054.2-201ENST00000561956 ABCA8O94911 1581 aa16.99■□□□□ 0.31
AC009054.2-201ENST00000561956 TIAM1Q13009 1591 aa16.99■□□□□ 0.31
AC009054.2-201ENST00000561956 PLB1Q6P1J6 1458 aa16.98■□□□□ 0.31
AC009054.2-201ENST00000561956 NUP153P49790 1475 aaKnown RBP16.96■□□□□ 0.31
AC009054.2-201ENST00000561956 TTBK1Q5TCY1 1321 aaPredicted RBP16.96■□□□□ 0.3
AC009054.2-201ENST00000561956 CCDC18Q5T9S5 1454 aa16.95■□□□□ 0.3
AC009054.2-201ENST00000561956 APLP2Q06481 763 aa16.95■□□□□ 0.3
AC009054.2-201ENST00000561956 EPRSP07814 1512 aaKnown RBP16.94■□□□□ 0.3
AC009054.2-201ENST00000561956 PLPPR3Q6T4P5 718 aa16.93■□□□□ 0.3
AC009054.2-201ENST00000561956 ARHGEF11O15085 1522 aa16.92■□□□□ 0.3
AC009054.2-201ENST00000561956 ATP1B4Q9UN42 357 aaPredicted RBP16.92■□□□□ 0.3
AC009054.2-201ENST00000561956 UACAQ9BZF9 1416 aa16.92■□□□□ 0.3
AC009054.2-201ENST00000561956 ABCC2Q92887 1545 aa16.91■□□□□ 0.3
AC009054.2-201ENST00000561956 CDK13Q14004 1512 aaKnown RBP16.9■□□□□ 0.3
AC009054.2-201ENST00000561956 UHRF1BP1LA0JNW5 1464 aa16.89■□□□□ 0.29
AC009054.2-201ENST00000561956 LRRC9Q6ZRR7 1453 aa16.89■□□□□ 0.29
AC009054.2-201ENST00000561956 PPARGC1BQ86YN6 1023 aaKnown RBP16.88■□□□□ 0.29
AC009054.2-201ENST00000561956 KANK4Q5T7N3 995 aaPredicted RBP16.87■□□□□ 0.29
AC009054.2-201ENST00000561956 RIMBP3CA6NJZ7 1639 aa16.87■□□□□ 0.29
AC009054.2-201ENST00000561956 RIMBP3BA6NNM3 1639 aa16.87■□□□□ 0.29
AC009054.2-201ENST00000561956 RIMBP3Q9UFD9 1639 aa16.87■□□□□ 0.29
AC009054.2-201ENST00000561956 ATP10BO94823 1461 aa16.84■□□□□ 0.29
AC009054.2-201ENST00000561956 MAGI3Q5TCQ9 1506 aa16.84■□□□□ 0.29
AC009054.2-201ENST00000561956 EHBP1L1Q8N3D4 1523 aa16.84■□□□□ 0.29
AC009054.2-201ENST00000561956 ADCY10Q96PN6 1610 aa16.84■□□□□ 0.29
AC009054.2-201ENST00000561956 ARID3CA6NKF2 412 aa16.81■□□□□ 0.28
AC009054.2-201ENST00000561956 KDM5BQ9UGL1 1544 aa16.8■□□□□ 0.28
AC009054.2-201ENST00000561956 MTUS2Q5JR59 1369 aa16.8■□□□□ 0.28
AC009054.2-201ENST00000561956 ZCCHC11Q5TAX3 1644 aaKnown RBP16.79■□□□□ 0.28
AC009054.2-201ENST00000561956 SUPT6HQ7KZ85 1726 aaKnown RBP16.77■□□□□ 0.28
AC009054.2-201ENST00000561956 CDK11AQ9UQ88 783 aaPredicted RBP16.76■□□□□ 0.27
AC009054.2-201ENST00000561956 TROQ12816 1431 aaPredicted RBP16.76■□□□□ 0.27
AC009054.2-201ENST00000561956 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.75■□□□□ 0.27
AC009054.2-201ENST00000561956 HNRNPUL2Q1KMD3 747 aaKnown RBP16.75■□□□□ 0.27
AC009054.2-201ENST00000561956 NCOA2Q15596 1464 aa16.73■□□□□ 0.27
AC009054.2-201ENST00000561956 TRIM26Q12899 539 aaPredicted RBP16.71■□□□□ 0.27
AC009054.2-201ENST00000561956 PHLDB1Q86UU1 1377 aa16.7■□□□□ 0.26
AC009054.2-201ENST00000561956 PLEKHD1A6NEE1 506 aa16.7■□□□□ 0.26
AC009054.2-201ENST00000561956 KIF14Q15058 1648 aa16.7■□□□□ 0.26
AC009054.2-201ENST00000561956 CYB5RLQ6IPT4 315 aa16.67■□□□□ 0.26
AC009054.2-201ENST00000561956 RRBP1Q9P2E9 1410 aaKnown RBP16.66■□□□□ 0.26
AC009054.2-201ENST00000561956 MYOM3Q5VTT5 1437 aa16.65■□□□□ 0.26
AC009054.2-201ENST00000561956 ABCC10Q5T3U5 1492 aa16.65■□□□□ 0.26
AC009054.2-201ENST00000561956 WDR7Q9Y4E6 1490 aa16.64■□□□□ 0.25
AC009054.2-201ENST00000561956 NPM1P06748 294 aaKnown RBP eCLIP16.63■□□□□ 0.25
AC009054.2-201ENST00000561956 FGD6Q6ZV73 1430 aa16.62■□□□□ 0.25
AC009054.2-201ENST00000561956 ASXL2Q76L83 1435 aa16.62■□□□□ 0.25
AC009054.2-201ENST00000561956 ITSN2Q9NZM3 1697 aa16.62■□□□□ 0.25
AC009054.2-201ENST00000561956 CCNB3Q8WWL7 1395 aa16.61■□□□□ 0.25
AC009054.2-201ENST00000561956 MAPKBP1O60336 1514 aa16.6■□□□□ 0.25
AC009054.2-201ENST00000561956 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.6■□□□□ 0.25
AC009054.2-201ENST00000561956 TTC37Q6PGP7 1564 aa16.6■□□□□ 0.25
AC009054.2-201ENST00000561956 CDC42BPAQ5VT25 1732 aa16.59■□□□□ 0.25
AC009054.2-201ENST00000561956 PCGF6Q9BYE7 350 aa16.59■□□□□ 0.25
AC009054.2-201ENST00000561956 MIA2Q96PC5 1412 aa16.59■□□□□ 0.25
AC009054.2-201ENST00000561956 GPATCH8Q9UKJ3 1502 aaKnown RBP16.58■□□□□ 0.24
AC009054.2-201ENST00000561956 PTPN23Q9H3S7 1636 aa16.57■□□□□ 0.24
AC009054.2-201ENST00000561956 PREX2Q70Z35 1606 aa16.56■□□□□ 0.24
AC009054.2-201ENST00000561956 TCOF1Q13428 1488 aaKnown RBP16.56■□□□□ 0.24
AC009054.2-201ENST00000561956 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.55■□□□□ 0.24
AC009054.2-201ENST00000561956 DNAJC5Q9H3Z4 198 aa16.55■□□□□ 0.24
AC009054.2-201ENST00000561956 MYO5CQ9NQX4 1742 aa16.55■□□□□ 0.24
AC009054.2-201ENST00000561956 ABCA9Q8IUA7 1624 aa16.55■□□□□ 0.24
AC009054.2-201ENST00000561956 KCNH8Q96L42 1107 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms