RNA–Protein interactions for RNA: ENST00000561898.1

NPTN-203, Transcript of neuroplastin, humanhuman

TSL 2

Gene NPTN, Length 447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-203ENST00000561898 STAG3Q9UJ98 1225 aa12.24□□□□□ -0.45
NPTN-203ENST00000561898 ATMINO43313 823 aaPredicted RBP12.23□□□□□ -0.45
NPTN-203ENST00000561898 FAM163AQ96GL9 167 aaPredicted RBP12.23□□□□□ -0.45
NPTN-203ENST00000561898 MS4A3Q96HJ5 214 aa12.17□□□□□ -0.46
NPTN-203ENST00000561898 SCUBE2Q9NQ36 999 aa12.16□□□□□ -0.46
NPTN-203ENST00000561898 MNX1P50219 401 aaPredicted RBP12.14□□□□□ -0.47
NPTN-203ENST00000561898 NPM1P06748 294 aaKnown RBP eCLIP12.13□□□□□ -0.47
NPTN-203ENST00000561898 CDAN1Q8IWY9 1227 aa12.06□□□□□ -0.48
NPTN-203ENST00000561898 POTEFA5A3E0 1075 aa12.05□□□□□ -0.48
NPTN-203ENST00000561898 ATN1P54259 1190 aaPredicted RBP12.05□□□□□ -0.48
NPTN-203ENST00000561898 BMP2KQ9NSY1 1161 aaPredicted RBP11.93□□□□□ -0.5
NPTN-203ENST00000561898 CCDC61Q9Y6R9 512 aa11.91□□□□□ -0.5
NPTN-203ENST00000561898 KIF12Q96FN5 646 aa11.89□□□□□ -0.51
NPTN-203ENST00000561898 SPDYE4A6NLX3 237 aa11.87□□□□□ -0.51
NPTN-203ENST00000561898 TRPC6Q9Y210 931 aa11.87□□□□□ -0.51
NPTN-203ENST00000561898 TSPYL2Q9H2G4 693 aaPredicted RBP11.86□□□□□ -0.51
NPTN-203ENST00000561898 COLQQ9Y215 455 aaPredicted RBP11.86□□□□□ -0.51
NPTN-203ENST00000561898 MMRN1Q13201 1228 aa11.85□□□□□ -0.51
NPTN-203ENST00000561898 TIE1P35590 1138 aa11.84□□□□□ -0.51
NPTN-203ENST00000561898 ST18O60284 1047 aa11.83□□□□□ -0.52
NPTN-203ENST00000561898 SPNS2Q8IVW8 549 aa11.8□□□□□ -0.52
NPTN-203ENST00000561898 SEC24BO95487 1268 aa11.78□□□□□ -0.52
NPTN-203ENST00000561898 TTLL13PA6NNM8 815 aa11.75□□□□□ -0.53
NPTN-203ENST00000561898 MAP3K13O43283 966 aa11.75□□□□□ -0.53
NPTN-203ENST00000561898 IER5LQ5T953 404 aa11.73□□□□□ -0.53
NPTN-203ENST00000561898 SLAIN1Q8ND83 568 aa11.73□□□□□ -0.53
NPTN-203ENST00000561898 TMEM121BQ9BXQ6 578 aaPredicted RBP11.66□□□□□ -0.54
NPTN-203ENST00000561898 TRIM35Q9UPQ4 493 aa11.66□□□□□ -0.54
NPTN-203ENST00000561898 RASEFQ8IZ41 740 aa11.59□□□□□ -0.55
NPTN-203ENST00000561898 SGIP1Q9BQI5 828 aa11.59□□□□□ -0.55
NPTN-203ENST00000561898 PROM2Q8N271 834 aa11.55□□□□□ -0.56
NPTN-203ENST00000561898 CSRNP3Q8WYN3 585 aa11.53□□□□□ -0.56
NPTN-203ENST00000561898 SNPHO15079 494 aa11.52□□□□□ -0.57
NPTN-203ENST00000561898 PLCG2P16885 1265 aa11.52□□□□□ -0.57
NPTN-203ENST00000561898 MARVELD3Q96A59 401 aa11.52□□□□□ -0.57
NPTN-203ENST00000561898 PCDHB13Q9Y5F0 798 aa11.51□□□□□ -0.57
NPTN-203ENST00000561898 IRX5P78411 483 aaPredicted RBP11.5□□□□□ -0.57
NPTN-203ENST00000561898 IFNL1Q8IU54 200 aa11.45□□□□□ -0.58
NPTN-203ENST00000561898 TMEM106CQ9BVX2 250 aa11.45□□□□□ -0.58
NPTN-203ENST00000561898 KRTAP3-3Q9BYR6 98 aa11.44□□□□□ -0.58
NPTN-203ENST00000561898 KRTAP3-2Q9BYR7 98 aa11.44□□□□□ -0.58
NPTN-203ENST00000561898 PLEKHG5O94827 1062 aa11.42□□□□□ -0.58
NPTN-203ENST00000561898 OCEL1Q9H607 264 aa11.41□□□□□ -0.58
NPTN-203ENST00000561898 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.41□□□□□ -0.58
NPTN-203ENST00000561898 MIER1Q8N108 512 aa11.4□□□□□ -0.58
NPTN-203ENST00000561898 POTEB3A0JP26 581 aa11.39□□□□□ -0.59
NPTN-203ENST00000561898 POTEBQ6S5H4 581 aa11.39□□□□□ -0.59
NPTN-203ENST00000561898 EMP3P54852 163 aa11.37□□□□□ -0.59
NPTN-203ENST00000561898 HS3ST6Q96QI5 342 aa11.34□□□□□ -0.59
NPTN-203ENST00000561898 NUBP1P53384 320 aa11.32□□□□□ -0.6
NPTN-203ENST00000561898 FAM205CA6NFA0 338 aa11.28□□□□□ -0.6
NPTN-203ENST00000561898 PDCD7Q8N8D1 485 aaKnown RBP11.21□□□□□ -0.61
NPTN-203ENST00000561898 PLCD3Q8N3E9 789 aa11.2□□□□□ -0.62
NPTN-203ENST00000561898 FAM212AQ96EL1 285 aa11.2□□□□□ -0.62
NPTN-203ENST00000561898 C3orf67Q6ZVT6 689 aa11.19□□□□□ -0.62
NPTN-203ENST00000561898 ZBTB47Q9UFB7 747 aaPredicted RBP11.19□□□□□ -0.62
NPTN-203ENST00000561898 L3MBTL3Q96JM7 780 aaPredicted RBP11.15□□□□□ -0.62
NPTN-203ENST00000561898 RNF166Q96A37 237 aaPredicted RBP11.13□□□□□ -0.63
NPTN-203ENST00000561898 PCDHB8Q9UN66 801 aa11.1□□□□□ -0.63
NPTN-203ENST00000561898 PYGBP11216 843 aa11.07□□□□□ -0.64
NPTN-203ENST00000561898 HOXB3P14651 431 aaPredicted RBP11.07□□□□□ -0.64
NPTN-203ENST00000561898 EHMT2Q96KQ7 1210 aa11.06□□□□□ -0.64
NPTN-203ENST00000561898 HOXB1P14653 301 aaPredicted RBP11.04□□□□□ -0.64
NPTN-203ENST00000561898 MYT1LQ9UL68 1186 aa11.02□□□□□ -0.65
NPTN-203ENST00000561898 MKRN3Q13064 507 aaKnown RBP11.01□□□□□ -0.65
NPTN-203ENST00000561898 ILDR1Q86SU0 546 aaPredicted RBP11□□□□□ -0.65
NPTN-203ENST00000561898 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11□□□□□ -0.65
NPTN-203ENST00000561898 DCAF8Q5TAQ9 597 aa10.99□□□□□ -0.65
NPTN-203ENST00000561898 ERBB3P21860 1342 aa10.98□□□□□ -0.65
NPTN-203ENST00000561898 GOLGA2Q08379 1002 aa10.96□□□□□ -0.65
NPTN-203ENST00000561898 ZNF710Q8N1W2 664 aa10.93□□□□□ -0.66
NPTN-203ENST00000561898 DPY19L2Q6NUT2 758 aa10.91□□□□□ -0.66
NPTN-203ENST00000561898 ZNF467Q7Z7K2 595 aaPredicted RBP10.91□□□□□ -0.66
NPTN-203ENST00000561898 DOK7Q18PE1 504 aa10.9□□□□□ -0.66
NPTN-203ENST00000561898 VARS2Q5ST30 1063 aaKnown RBP10.9□□□□□ -0.66
NPTN-203ENST00000561898 PTGER2P43116 358 aa10.89□□□□□ -0.67
NPTN-203ENST00000561898 ZNF687Q8N1G0 1237 aa10.87□□□□□ -0.67
NPTN-203ENST00000561898 BOLA1Q9Y3E2 137 aa10.87□□□□□ -0.67
NPTN-203ENST00000561898 PSEN1P49768 467 aa10.84□□□□□ -0.67
NPTN-203ENST00000561898 CHRM1P11229 460 aaPredicted RBP10.81□□□□□ -0.68
NPTN-203ENST00000561898 RIMBP2O15034 1052 aa10.8□□□□□ -0.68
NPTN-203ENST00000561898 G3V3G9 751 aa10.79□□□□□ -0.68
NPTN-203ENST00000561898 ZSWIM6Q9HCJ5 1215 aa10.78□□□□□ -0.68
NPTN-203ENST00000561898 GSE1Q14687 1217 aa10.75□□□□□ -0.69
NPTN-203ENST00000561898 GPR153Q6NV75 609 aa10.73□□□□□ -0.69
NPTN-203ENST00000561898 PDAP1Q13442 181 aaKnown RBP10.71□□□□□ -0.69
NPTN-203ENST00000561898 ANKRD13DQ6ZTN6 518 aa10.71□□□□□ -0.69
NPTN-203ENST00000561898 PLA2G2EQ9NZK7 142 aa10.7□□□□□ -0.7
NPTN-203ENST00000561898 CABP2Q9NPB3 220 aa10.69□□□□□ -0.7
NPTN-203ENST00000561898 LSM11P83369 360 aaKnown RBP eCLIP10.65□□□□□ -0.7
NPTN-203ENST00000561898 TMEM92Q6UXU6 159 aa10.65□□□□□ -0.7
NPTN-203ENST00000561898 HCSTQ9UBK5 93 aa10.59□□□□□ -0.71
NPTN-203ENST00000561898 ZNF316A6NFI3 1004 aaPredicted RBP10.58□□□□□ -0.72
NPTN-203ENST00000561898 ARSIQ5FYB1 569 aa10.58□□□□□ -0.72
NPTN-203ENST00000561898 MICALL2Q8IY33 904 aa10.57□□□□□ -0.72
NPTN-203ENST00000561898 KLHL34Q8N239 644 aa10.52□□□□□ -0.73
NPTN-203ENST00000561898 PBX2P40425 430 aa10.51□□□□□ -0.73
NPTN-203ENST00000561898 EFCAB3Q8N7B9 438 aa10.5□□□□□ -0.73
NPTN-203ENST00000561898 KHSRPQ92945 711 aaKnown RBP eCLIP10.5□□□□□ -0.73
NPTN-203ENST00000561898 FBXO3Q9UK99 471 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms