RNA–Protein interactions for RNA: ENST00000561778.2

AC008555.1-201, humanhuman

BASIC

Gene AC008555.1, Length 2,757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008555.1-201ENST00000561778 RBM19Q9Y4C8 960 aaKnown RBP11□□□□□ -0.65
AC008555.1-201ENST00000561778 ERICH3Q5RHP9 1530 aa11□□□□□ -0.65
AC008555.1-201ENST00000561778 IRX6P78412 446 aaPredicted RBP10.99□□□□□ -0.65
AC008555.1-201ENST00000561778 CUX1P39880 1505 aa10.99□□□□□ -0.65
AC008555.1-201ENST00000561778 CUX2O14529 1486 aa10.99□□□□□ -0.65
AC008555.1-201ENST00000561778 PPP1R15AO75807 674 aaPredicted RBP10.99□□□□□ -0.65
AC008555.1-201ENST00000561778 KIF27Q86VH2 1401 aa10.98□□□□□ -0.65
AC008555.1-201ENST00000561778 PHLDB1Q86UU1 1377 aa10.98□□□□□ -0.65
AC008555.1-201ENST00000561778 NEFLP07196 543 aa10.97□□□□□ -0.65
AC008555.1-201ENST00000561778 SETD5Q9C0A6 1442 aa10.96□□□□□ -0.65
AC008555.1-201ENST00000561778 BIVM-ERCC5R4GMW8 1640 aa10.96□□□□□ -0.66
AC008555.1-201ENST00000561778 CC2D2AQ9P2K1 1620 aa10.95□□□□□ -0.66
AC008555.1-201ENST00000561778 ANP32CO43423 234 aa10.94□□□□□ -0.66
AC008555.1-201ENST00000561778 MSH5O43196 834 aa10.93□□□□□ -0.66
AC008555.1-201ENST00000561778 IGF1RP08069 1367 aa10.9□□□□□ -0.66
AC008555.1-201ENST00000561778 TIAM1Q13009 1591 aa10.89□□□□□ -0.67
AC008555.1-201ENST00000561778 LRRC9Q6ZRR7 1453 aa10.89□□□□□ -0.67
AC008555.1-201ENST00000561778 HNRNPUQ00839 825 aaKnown RBP eCLIP10.88□□□□□ -0.67
AC008555.1-201ENST00000561778 CARMIL1Q5VZK9 1371 aa10.86□□□□□ -0.67
AC008555.1-201ENST00000561778 CCER2I3L3R5 266 aa10.85□□□□□ -0.67
AC008555.1-201ENST00000561778 FHOD3Q2V2M9 1422 aa10.85□□□□□ -0.67
AC008555.1-201ENST00000561778 TONSLQ96HA7 1378 aa10.85□□□□□ -0.67
AC008555.1-201ENST00000561778 CCDC184Q52MB2 194 aa10.83□□□□□ -0.68
AC008555.1-201ENST00000561778 PCF11O94913 1555 aaKnown RBP10.81□□□□□ -0.68
AC008555.1-201ENST00000561778 CNGB1Q14028 1251 aaPredicted RBP10.81□□□□□ -0.68
AC008555.1-201ENST00000561778 CFTRP13569 1480 aa10.81□□□□□ -0.68
AC008555.1-201ENST00000561778 SENP3-EIF4A1A0A087X0R7 540 aa10.8□□□□□ -0.68
AC008555.1-201ENST00000561778 DNAJC5Q9H3Z4 198 aa10.79□□□□□ -0.68
AC008555.1-201ENST00000561778 PTPRKQ15262 1439 aa10.79□□□□□ -0.68
AC008555.1-201ENST00000561778 NCAPD3P42695 1498 aa10.78□□□□□ -0.68
AC008555.1-201ENST00000561778 CHIC2Q9UKJ5 165 aa10.78□□□□□ -0.68
AC008555.1-201ENST00000561778 FGD5Q6ZNL6 1462 aa10.77□□□□□ -0.68
AC008555.1-201ENST00000561778 CDK11AQ9UQ88 783 aaPredicted RBP10.77□□□□□ -0.68
AC008555.1-201ENST00000561778 AQRO60306 1485 aaKnown RBP eCLIP10.77□□□□□ -0.69
AC008555.1-201ENST00000561778 WASHC2AQ641Q2 1341 aa10.77□□□□□ -0.69
AC008555.1-201ENST00000561778 B4GALNT3Q6L9W6 998 aa10.77□□□□□ -0.69
AC008555.1-201ENST00000561778 ERICH6Q7L0X2 663 aa10.77□□□□□ -0.69
AC008555.1-201ENST00000561778 FAM9BQ8IZU0 186 aa10.77□□□□□ -0.69
AC008555.1-201ENST00000561778 RRP7BPQ9NSQ0 103 aa10.77□□□□□ -0.69
AC008555.1-201ENST00000561778 TIMELESSQ9UNS1 1208 aa10.77□□□□□ -0.69
AC008555.1-201ENST00000561778 HSPA5P11021 654 aaKnown RBP10.76□□□□□ -0.69
AC008555.1-201ENST00000561778 FHAD1B1AJZ9 1412 aa10.76□□□□□ -0.69
AC008555.1-201ENST00000561778 FOXD1Q16676 465 aa10.76□□□□□ -0.69
AC008555.1-201ENST00000561778 CCDC18Q5T9S5 1454 aa10.76□□□□□ -0.69
AC008555.1-201ENST00000561778 MAP3K1Q13233 1512 aa10.75□□□□□ -0.69
AC008555.1-201ENST00000561778 ARID3CA6NKF2 412 aa10.74□□□□□ -0.69
AC008555.1-201ENST00000561778 RAD54L2Q9Y4B4 1467 aa10.73□□□□□ -0.69
AC008555.1-201ENST00000561778 FGD6Q6ZV73 1430 aa10.73□□□□□ -0.69
AC008555.1-201ENST00000561778 C11orf95C9JLR9 678 aaPredicted RBP10.73□□□□□ -0.69
AC008555.1-201ENST00000561778 HMGXB3Q12766 1538 aa10.73□□□□□ -0.69
AC008555.1-201ENST00000561778 MTUS2Q5JR59 1369 aa10.72□□□□□ -0.69
AC008555.1-201ENST00000561778 CFAP43Q8NDM7 1665 aa10.71□□□□□ -0.7
AC008555.1-201ENST00000561778 FANCIQ9NVI1 1328 aa10.7□□□□□ -0.7
AC008555.1-201ENST00000561778 UACAQ9BZF9 1416 aa10.69□□□□□ -0.7
AC008555.1-201ENST00000561778 NAIPQ13075 1403 aa10.68□□□□□ -0.7
AC008555.1-201ENST00000561778 MRS2Q9HD23 443 aa10.68□□□□□ -0.7
AC008555.1-201ENST00000561778 CADPSQ9ULU8 1353 aa10.68□□□□□ -0.7
AC008555.1-201ENST00000561778 KDM5BQ9UGL1 1544 aa10.68□□□□□ -0.7
AC008555.1-201ENST00000561778 NBR1Q14596 966 aa10.68□□□□□ -0.7
AC008555.1-201ENST00000561778 HFM1A2PYH4 1435 aa10.68□□□□□ -0.7
AC008555.1-201ENST00000561778 CASKIN1Q8WXD9 1431 aa10.68□□□□□ -0.7
AC008555.1-201ENST00000561778 FYCO1Q9BQS8 1478 aa10.67□□□□□ -0.7
AC008555.1-201ENST00000561778 PPP4R2Q9NY27 417 aa10.67□□□□□ -0.7
AC008555.1-201ENST00000561778 PTPN23Q9H3S7 1636 aa10.66□□□□□ -0.7
AC008555.1-201ENST00000561778 EIF4G2P78344 907 aaKnown RBP eCLIP10.66□□□□□ -0.7
AC008555.1-201ENST00000561778 L3MBTL2Q969R5 705 aa10.66□□□□□ -0.7
AC008555.1-201ENST00000561778 POLR3GLQ9BT43 218 aa10.66□□□□□ -0.7
AC008555.1-201ENST00000561778 PAK3O75914 559 aaPredicted RBP10.65□□□□□ -0.7
AC008555.1-201ENST00000561778 PRKRIP1Q9H875 184 aaPredicted RBP10.65□□□□□ -0.71
AC008555.1-201ENST00000561778 NCOA2Q15596 1464 aa10.64□□□□□ -0.71
AC008555.1-201ENST00000561778 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.63□□□□□ -0.71
AC008555.1-201ENST00000561778 DEKP35659 375 aaKnown RBP10.63□□□□□ -0.71
AC008555.1-201ENST00000561778 DENND4BO75064 1496 aaPredicted RBP10.62□□□□□ -0.71
AC008555.1-201ENST00000561778 NBPF8Q3BBV2 869 aa10.62□□□□□ -0.71
AC008555.1-201ENST00000561778 SNAPC4Q5SXM2 1469 aa10.62□□□□□ -0.71
AC008555.1-201ENST00000561778 FMN1Q68DA7 1419 aa10.61□□□□□ -0.71
AC008555.1-201ENST00000561778 TDRD9Q8NDG6 1382 aaKnown RBP10.61□□□□□ -0.71
AC008555.1-201ENST00000561778 MYOM3Q5VTT5 1437 aa10.61□□□□□ -0.71
AC008555.1-201ENST00000561778 CNTLNQ9NXG0 1405 aa10.61□□□□□ -0.71
AC008555.1-201ENST00000561778 MPHOSPH9Q99550 1183 aa10.61□□□□□ -0.71
AC008555.1-201ENST00000561778 FANCD2Q9BXW9 1451 aa10.61□□□□□ -0.71
AC008555.1-201ENST00000561778 AKNAQ7Z591 1439 aa10.61□□□□□ -0.71
AC008555.1-201ENST00000561778 KDM6BO15054 1643 aa10.6□□□□□ -0.71
AC008555.1-201ENST00000561778 CCDC7Q96M83 1385 aa10.6□□□□□ -0.71
AC008555.1-201ENST00000561778 POLA1P09884 1462 aaPredicted RBP10.59□□□□□ -0.71
AC008555.1-201ENST00000561778 ZNF326Q5BKZ1 582 aaKnown RBP10.59□□□□□ -0.71
AC008555.1-201ENST00000561778 NESP48681 1621 aa10.58□□□□□ -0.72
AC008555.1-201ENST00000561778 KIF7Q2M1P5 1343 aa10.58□□□□□ -0.72
AC008555.1-201ENST00000561778 ZBED9Q6R2W3 1325 aa10.57□□□□□ -0.72
AC008555.1-201ENST00000561778 EFCAB5A4FU69 1503 aa10.57□□□□□ -0.72
AC008555.1-201ENST00000561778 MAGI3Q5TCQ9 1506 aa10.57□□□□□ -0.72
AC008555.1-201ENST00000561778 NOP58Q9Y2X3 529 aaKnown RBP10.57□□□□□ -0.72
AC008555.1-201ENST00000561778 LRRIQ1Q96JM4 1722 aa10.57□□□□□ -0.72
AC008555.1-201ENST00000561778 NCOA1Q15788 1441 aa10.55□□□□□ -0.72
AC008555.1-201ENST00000561778 ABCA10Q8WWZ4 1543 aa10.54□□□□□ -0.72
AC008555.1-201ENST00000561778 TOPBP1Q92547 1522 aa10.54□□□□□ -0.72
AC008555.1-201ENST00000561778 ZNF644Q9H582 1327 aaPredicted RBP10.54□□□□□ -0.72
AC008555.1-201ENST00000561778 CCDC136Q96JN2 1154 aa10.54□□□□□ -0.72
AC008555.1-201ENST00000561778 PRDM2Q13029 1718 aa10.53□□□□□ -0.72
AC008555.1-201ENST00000561778 ERICH6BQ5W0A0 696 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms