RNA–Protein interactions for RNA: ENST00000561499.1

ACSM3-204, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 4

Gene ACSM3, Length 527 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-204ENST00000561499 MMRN1Q13201 1228 aa9.99□□□□□ -0.81
ACSM3-204ENST00000561499 SLC39A7Q92504 469 aa9.99□□□□□ -0.81
ACSM3-204ENST00000561499 ATMINO43313 823 aaPredicted RBP9.98□□□□□ -0.81
ACSM3-204ENST00000561499 C7P10643 843 aa9.98□□□□□ -0.81
ACSM3-204ENST00000561499 CREBZFQ9NS37 354 aa9.98□□□□□ -0.81
ACSM3-204ENST00000561499 SCUBE2Q9NQ36 999 aa9.95□□□□□ -0.82
ACSM3-204ENST00000561499 POTEFA5A3E0 1075 aa9.94□□□□□ -0.82
ACSM3-204ENST00000561499 SPNS2Q8IVW8 549 aa9.91□□□□□ -0.82
ACSM3-204ENST00000561499 MS4A3Q96HJ5 214 aa9.91□□□□□ -0.82
ACSM3-204ENST00000561499 ATN1P54259 1190 aaPredicted RBP9.83□□□□□ -0.84
ACSM3-204ENST00000561499 ST18O60284 1047 aa9.8□□□□□ -0.84
ACSM3-204ENST00000561499 PAK3O75914 559 aaPredicted RBP9.8□□□□□ -0.84
ACSM3-204ENST00000561499 MNX1P50219 401 aaPredicted RBP9.73□□□□□ -0.85
ACSM3-204ENST00000561499 COLQQ9Y215 455 aaPredicted RBP9.71□□□□□ -0.86
ACSM3-204ENST00000561499 TRPC6Q9Y210 931 aa9.68□□□□□ -0.86
ACSM3-204ENST00000561499 BMP2KQ9NSY1 1161 aaPredicted RBP9.67□□□□□ -0.86
ACSM3-204ENST00000561499 SPDYE4A6NLX3 237 aa9.63□□□□□ -0.87
ACSM3-204ENST00000561499 SLAIN1Q8ND83 568 aa9.6□□□□□ -0.87
ACSM3-204ENST00000561499 NPM1P06748 294 aaKnown RBP eCLIP9.58□□□□□ -0.88
ACSM3-204ENST00000561499 STAG3Q9UJ98 1225 aa9.55□□□□□ -0.88
ACSM3-204ENST00000561499 CCDC61Q9Y6R9 512 aa9.55□□□□□ -0.88
ACSM3-204ENST00000561499 MARVELD3Q96A59 401 aa9.54□□□□□ -0.88
ACSM3-204ENST00000561499 KIF12Q96FN5 646 aa9.54□□□□□ -0.88
ACSM3-204ENST00000561499 KRTAP3-3Q9BYR6 98 aa9.53□□□□□ -0.88
ACSM3-204ENST00000561499 KRTAP3-2Q9BYR7 98 aa9.53□□□□□ -0.88
ACSM3-204ENST00000561499 TMEM121BQ9BXQ6 578 aaPredicted RBP9.52□□□□□ -0.89
ACSM3-204ENST00000561499 SEC24BO95487 1268 aa9.51□□□□□ -0.89
ACSM3-204ENST00000561499 TIE1P35590 1138 aa9.51□□□□□ -0.89
ACSM3-204ENST00000561499 TTLL13PA6NNM8 815 aa9.48□□□□□ -0.89
ACSM3-204ENST00000561499 TSPYL2Q9H2G4 693 aaPredicted RBP9.48□□□□□ -0.89
ACSM3-204ENST00000561499 POTEB3A0JP26 581 aa9.47□□□□□ -0.89
ACSM3-204ENST00000561499 POTEBQ6S5H4 581 aa9.47□□□□□ -0.89
ACSM3-204ENST00000561499 FKBP8Q14318 412 aa9.45□□□□□ -0.9
ACSM3-204ENST00000561499 PROM2Q8N271 834 aa9.44□□□□□ -0.9
ACSM3-204ENST00000561499 MAP3K13O43283 966 aa9.43□□□□□ -0.9
ACSM3-204ENST00000561499 IER5LQ5T953 404 aa9.41□□□□□ -0.9
ACSM3-204ENST00000561499 TRIM35Q9UPQ4 493 aa9.4□□□□□ -0.9
ACSM3-204ENST00000561499 HS3ST6Q96QI5 342 aa9.33□□□□□ -0.92
ACSM3-204ENST00000561499 EMP3P54852 163 aa9.32□□□□□ -0.92
ACSM3-204ENST00000561499 SNPHO15079 494 aa9.3□□□□□ -0.92
ACSM3-204ENST00000561499 FBXO3Q9UK99 471 aa9.29□□□□□ -0.92
ACSM3-204ENST00000561499 IRX5P78411 483 aaPredicted RBP9.27□□□□□ -0.93
ACSM3-204ENST00000561499 FAM205CA6NFA0 338 aa9.26□□□□□ -0.93
ACSM3-204ENST00000561499 PLCG2P16885 1265 aa9.25□□□□□ -0.93
ACSM3-204ENST00000561499 PLEKHG5O94827 1062 aa9.24□□□□□ -0.93
ACSM3-204ENST00000561499 RNF166Q96A37 237 aaPredicted RBP9.22□□□□□ -0.93
ACSM3-204ENST00000561499 RASEFQ8IZ41 740 aa9.21□□□□□ -0.94
ACSM3-204ENST00000561499 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.18□□□□□ -0.94
ACSM3-204ENST00000561499 MIER1Q8N108 512 aa9.16□□□□□ -0.94
ACSM3-204ENST00000561499 PLCD3Q8N3E9 789 aa9.15□□□□□ -0.94
ACSM3-204ENST00000561499 TMEM106CQ9BVX2 250 aa9.14□□□□□ -0.95
ACSM3-204ENST00000561499 ZBTB47Q9UFB7 747 aaPredicted RBP9.14□□□□□ -0.95
ACSM3-204ENST00000561499 PCDHB13Q9Y5F0 798 aa9.14□□□□□ -0.95
ACSM3-204ENST00000561499 IFNL1Q8IU54 200 aa9.13□□□□□ -0.95
ACSM3-204ENST00000561499 SGIP1Q9BQI5 828 aa9.13□□□□□ -0.95
ACSM3-204ENST00000561499 OCEL1Q9H607 264 aa9.11□□□□□ -0.95
ACSM3-204ENST00000561499 MYT1LQ9UL68 1186 aa9.08□□□□□ -0.96
ACSM3-204ENST00000561499 VASPP50552 380 aaPredicted RBP9.07□□□□□ -0.96
ACSM3-204ENST00000561499 PDCD7Q8N8D1 485 aaKnown RBP9.01□□□□□ -0.97
ACSM3-204ENST00000561499 HOXB3P14651 431 aaPredicted RBP8.99□□□□□ -0.97
ACSM3-204ENST00000561499 KLHL34Q8N239 644 aa8.98□□□□□ -0.97
ACSM3-204ENST00000561499 C3orf67Q6ZVT6 689 aa8.96□□□□□ -0.98
ACSM3-204ENST00000561499 HOXB1P14653 301 aaPredicted RBP8.93□□□□□ -0.98
ACSM3-204ENST00000561499 NUBP1P53384 320 aa8.91□□□□□ -0.98
ACSM3-204ENST00000561499 FAM212AQ96EL1 285 aa8.91□□□□□ -0.98
ACSM3-204ENST00000561499 ERBB3P21860 1342 aa8.9□□□□□ -0.98
ACSM3-204ENST00000561499 IFNLR1Q8IU57 520 aaPredicted RBP8.89□□□□□ -0.99
ACSM3-204ENST00000561499 SPOCK2Q92563 424 aa8.88□□□□□ -0.99
ACSM3-204ENST00000561499 VARS2Q5ST30 1063 aaKnown RBP8.87□□□□□ -0.99
ACSM3-204ENST00000561499 GSE1Q14687 1217 aa8.86□□□□□ -0.99
ACSM3-204ENST00000561499 PLA2G2EQ9NZK7 142 aa8.85□□□□□ -0.99
ACSM3-204ENST00000561499 DCAF8Q5TAQ9 597 aa8.84□□□□□ -0.99
ACSM3-204ENST00000561499 L3MBTL3Q96JM7 780 aaPredicted RBP8.84□□□□□ -0.99
ACSM3-204ENST00000561499 PTGER2P43116 358 aa8.82□□□□□ -1
ACSM3-204ENST00000561499 ZNF687Q8N1G0 1237 aa8.81□□□□□ -1
ACSM3-204ENST00000561499 PCDHB8Q9UN66 801 aa8.78□□□□□ -1
ACSM3-204ENST00000561499 ZNF710Q8N1W2 664 aa8.77□□□□□ -1.01
ACSM3-204ENST00000561499 TRIM41Q8WV44 630 aa8.76□□□□□ -1.01
ACSM3-204ENST00000561499 DPY19L2Q6NUT2 758 aa8.74□□□□□ -1.01
ACSM3-204ENST00000561499 CIZ1Q9ULV3 898 aaPredicted RBP8.74□□□□□ -1.01
ACSM3-204ENST00000561499 CHRM1P11229 460 aaPredicted RBP8.73□□□□□ -1.01
ACSM3-204ENST00000561499 ILDR1Q86SU0 546 aaPredicted RBP8.73□□□□□ -1.01
ACSM3-204ENST00000561499 ANKRD13DQ6ZTN6 518 aa8.72□□□□□ -1.01
ACSM3-204ENST00000561499 DOK7Q18PE1 504 aa8.71□□□□□ -1.02
ACSM3-204ENST00000561499 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.71□□□□□ -1.022e-10■□□□□ 11.3
ACSM3-204ENST00000561499 PYGBP11216 843 aa8.7□□□□□ -1.02
ACSM3-204ENST00000561499 ZNF467Q7Z7K2 595 aaPredicted RBP8.68□□□□□ -1.02
ACSM3-204ENST00000561499 MKRN3Q13064 507 aaKnown RBP8.67□□□□□ -1.02
ACSM3-204ENST00000561499 LSM11P83369 360 aaKnown RBP eCLIP8.64□□□□□ -1.03
ACSM3-204ENST00000561499 GPR153Q6NV75 609 aa8.63□□□□□ -1.03
ACSM3-204ENST00000561499 BOLA1Q9Y3E2 137 aa8.62□□□□□ -1.03
ACSM3-204ENST00000561499 HCSTQ9UBK5 93 aa8.61□□□□□ -1.03
ACSM3-204ENST00000561499 RIMBP2O15034 1052 aa8.59□□□□□ -1.03
ACSM3-204ENST00000561499 GOLGA2Q08379 1002 aa8.59□□□□□ -1.03
ACSM3-204ENST00000561499 TAOK2Q9UL54 1235 aa8.59□□□□□ -1.03
ACSM3-204ENST00000561499 IRX2Q9BZI1 471 aaPredicted RBP8.58□□□□□ -1.04
ACSM3-204ENST00000561499 POTEEQ6S8J3 1075 aa8.57□□□□□ -1.04
ACSM3-204ENST00000561499 ZSWIM6Q9HCJ5 1215 aa8.57□□□□□ -1.04
ACSM3-204ENST00000561499 PDAP1Q13442 181 aaKnown RBP8.56□□□□□ -1.04
ACSM3-204ENST00000561499 ECM2O94769 699 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms