RNA–Protein interactions for RNA: ENST00000561356.1

TM2D3-214, Transcript of TM2 domain containing 3, humanhuman

TSL 4

Gene TM2D3, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-214ENST00000561356 PBRM1Q86U86 1689 aa15.35■□□□□ 0.05
TM2D3-214ENST00000561356 PPRC1Q5VV67 1664 aaKnown RBP15.34■□□□□ 0.05
TM2D3-214ENST00000561356 COL17A1Q9UMD9 1497 aaPredicted RBP15.31■□□□□ 0.04
TM2D3-214ENST00000561356 ADCY10Q96PN6 1610 aa15.29■□□□□ 0.04
TM2D3-214ENST00000561356 FGD5Q6ZNL6 1462 aa15.28■□□□□ 0.04
TM2D3-214ENST00000561356 NUP160Q12769 1436 aa15.28■□□□□ 0.04
TM2D3-214ENST00000561356 GRIN2AQ12879 1464 aa15.26■□□□□ 0.03
TM2D3-214ENST00000561356 CCDC88BA6NC98 1476 aa15.25■□□□□ 0.03
TM2D3-214ENST00000561356 TOP2BQ02880 1626 aa15.21■□□□□ 0.03
TM2D3-214ENST00000561356 PRG4Q92954 1404 aaPredicted RBP15.17■□□□□ 0.02
TM2D3-214ENST00000561356 PHF23Q9BUL5 403 aaPredicted RBP15.17■□□□□ 0.02
TM2D3-214ENST00000561356 ABCA5Q8WWZ7 1642 aa15.17■□□□□ 0.02
TM2D3-214ENST00000561356 ADAMTS12P58397 1594 aa15.15■□□□□ 0.02
TM2D3-214ENST00000561356 CERKQ8TCT0 537 aa15.14■□□□□ 0.01
TM2D3-214ENST00000561356 PCF11O94913 1555 aaKnown RBP15.12■□□□□ 0.01
TM2D3-214ENST00000561356 NPM1P06748 294 aaKnown RBP eCLIP15.12■□□□□ 0.01
TM2D3-214ENST00000561356 CUX1P39880 1505 aa15.11■□□□□ 0.01
TM2D3-214ENST00000561356 GLI2P10070 1586 aa15.07■□□□□ 0
TM2D3-214ENST00000561356 KIF21BO75037 1637 aa15.06■□□□□ 0
TM2D3-214ENST00000561356 PTPRMP28827 1452 aa15.05■□□□□ -0
TM2D3-214ENST00000561356 ABCA10Q8WWZ4 1543 aa15.01□□□□□ -0.01
TM2D3-214ENST00000561356 MAP3K4Q9Y6R4 1608 aa15□□□□□ -0.01
TM2D3-214ENST00000561356 ADAMTSL3P82987 1691 aa14.99□□□□□ -0.01
TM2D3-214ENST00000561356 RUSC2Q8N2Y8 1516 aa14.98□□□□□ -0.01
TM2D3-214ENST00000561356 JPH4Q96JJ6 628 aa14.98□□□□□ -0.01
TM2D3-214ENST00000561356 ASXL2Q76L83 1435 aa14.96□□□□□ -0.01
TM2D3-214ENST00000561356 HSPA2P54652 639 aa14.94□□□□□ -0.02
TM2D3-214ENST00000561356 FHAD1B1AJZ9 1412 aa14.92□□□□□ -0.02
TM2D3-214ENST00000561356 TEX14Q8IWB6 1497 aa14.89□□□□□ -0.03
TM2D3-214ENST00000561356 PLB1Q6P1J6 1458 aa14.89□□□□□ -0.03
TM2D3-214ENST00000561356 EPRSP07814 1512 aaKnown RBP14.88□□□□□ -0.03
TM2D3-214ENST00000561356 MADDQ8WXG6 1647 aa14.88□□□□□ -0.03
TM2D3-214ENST00000561356 CUL7Q14999 1698 aa14.87□□□□□ -0.03
TM2D3-214ENST00000561356 ABCC2Q92887 1545 aa14.87□□□□□ -0.03
TM2D3-214ENST00000561356 SENP3Q9H4L4 574 aaPredicted RBP14.81□□□□□ -0.04
TM2D3-214ENST00000561356 BCORL1Q5H9F3 1711 aa14.8□□□□□ -0.04
TM2D3-214ENST00000561356 KIAA0586Q9BVV6 1533 aa14.79□□□□□ -0.04
TM2D3-214ENST00000561356 ERICH3Q5RHP9 1530 aa14.76□□□□□ -0.05
TM2D3-214ENST00000561356 RIMS1Q86UR5 1692 aaKnown RBP14.76□□□□□ -0.05
TM2D3-214ENST00000561356 MED1Q15648 1581 aaPredicted RBP14.74□□□□□ -0.05
TM2D3-214ENST00000561356 PTPRGP23470 1445 aa14.71□□□□□ -0.05
TM2D3-214ENST00000561356 STRCQ7RTU9 1775 aa14.7□□□□□ -0.06
TM2D3-214ENST00000561356 TTBK1Q5TCY1 1321 aaPredicted RBP14.68□□□□□ -0.06
TM2D3-214ENST00000561356 MAGI3Q5TCQ9 1506 aa14.68□□□□□ -0.06
TM2D3-214ENST00000561356 LTBP4Q8N2S1 1624 aa14.68□□□□□ -0.06
TM2D3-214ENST00000561356 UHRF1BP1LA0JNW5 1464 aa14.68□□□□□ -0.06
TM2D3-214ENST00000561356 ZCCHC11Q5TAX3 1644 aaKnown RBP14.67□□□□□ -0.06
TM2D3-214ENST00000561356 KDM5BQ9UGL1 1544 aa14.66□□□□□ -0.06
TM2D3-214ENST00000561356 SRCAPQ6ZRS2 3230 aa14.62□□□□□ -0.07
TM2D3-214ENST00000561356 CFAP43Q8NDM7 1665 aa14.61□□□□□ -0.07
TM2D3-214ENST00000561356 WRNQ14191 1432 aaPredicted RBP eCLIP14.61□□□□□ -0.07
TM2D3-214ENST00000561356 PLPPR3Q6T4P5 718 aa14.6□□□□□ -0.07
TM2D3-214ENST00000561356 WDR7Q9Y4E6 1490 aa14.6□□□□□ -0.07
TM2D3-214ENST00000561356 ARAP3Q8WWN8 1544 aa14.6□□□□□ -0.07
TM2D3-214ENST00000561356 CD109Q6YHK3 1445 aa14.59□□□□□ -0.07
TM2D3-214ENST00000561356 UACAQ9BZF9 1416 aa14.59□□□□□ -0.07
TM2D3-214ENST00000561356 IQSEC2Q5JU85 1478 aa14.59□□□□□ -0.07
TM2D3-214ENST00000561356 TNIKQ9UKE5 1360 aa14.59□□□□□ -0.07
TM2D3-214ENST00000561356 YEATS2Q9ULM3 1422 aa14.58□□□□□ -0.07
TM2D3-214ENST00000561356 FRMPD1Q5SYB0 1578 aa14.56□□□□□ -0.08
TM2D3-214ENST00000561356 SIGLEC1Q9BZZ2 1709 aa14.55□□□□□ -0.08
TM2D3-214ENST00000561356 PREX1Q8TCU6 1659 aa14.53□□□□□ -0.08
TM2D3-214ENST00000561356 ARID4BQ4LE39 1312 aaPredicted RBP14.51□□□□□ -0.09
TM2D3-214ENST00000561356 BIVM-ERCC5R4GMW8 1640 aa14.49□□□□□ -0.09
TM2D3-214ENST00000561356 TTC37Q6PGP7 1564 aa14.49□□□□□ -0.09
TM2D3-214ENST00000561356 ARHGEF40Q8TER5 1519 aa14.48□□□□□ -0.09
TM2D3-214ENST00000561356 PTPRTO14522 1441 aa14.48□□□□□ -0.09
TM2D3-214ENST00000561356 RAPGEF3O95398 923 aa14.47□□□□□ -0.09
TM2D3-214ENST00000561356 DMRT2Q9Y5R5 561 aa14.45□□□□□ -0.1
TM2D3-214ENST00000561356 DISP1Q96F81 1524 aa14.45□□□□□ -0.1
TM2D3-214ENST00000561356 FER1L4A9Z1Z3 1794 aa14.45□□□□□ -0.1
TM2D3-214ENST00000561356 HSPA1LP34931 641 aa14.44□□□□□ -0.1
TM2D3-214ENST00000561356 CARMIL2Q6F5E8 1435 aa14.43□□□□□ -0.1
TM2D3-214ENST00000561356 UBAP1LF5GYI3 381 aa14.43□□□□□ -0.1
TM2D3-214ENST00000561356 KCNH8Q96L42 1107 aa14.4□□□□□ -0.1
TM2D3-214ENST00000561356 RGS17Q9UGC6 210 aaPredicted RBP14.36□□□□□ -0.11
TM2D3-214ENST00000561356 IQGAP2Q13576 1575 aa14.34□□□□□ -0.11
TM2D3-214ENST00000561356 FANCAO15360 1455 aa14.33□□□□□ -0.12
TM2D3-214ENST00000561356 CEBPAP49715 358 aaPredicted RBP14.33□□□□□ -0.12
TM2D3-214ENST00000561356 SETD1AO15047 1707 aaKnown RBP14.32□□□□□ -0.12
TM2D3-214ENST00000561356 RICTORQ6R327 1708 aa14.32□□□□□ -0.12
TM2D3-214ENST00000561356 UHRF1BP1Q6BDS2 1440 aa14.32□□□□□ -0.12
TM2D3-214ENST00000561356 ZNF335Q9H4Z2 1342 aaPredicted RBP14.31□□□□□ -0.12
TM2D3-214ENST00000561356 ARHGEF12Q9NZN5 1544 aa14.31□□□□□ -0.12
TM2D3-214ENST00000561356 ABCA9Q8IUA7 1624 aa14.3□□□□□ -0.12
TM2D3-214ENST00000561356 MLECQ14165 292 aa14.29□□□□□ -0.12
TM2D3-214ENST00000561356 NCOA1Q15788 1441 aa14.29□□□□□ -0.12
TM2D3-214ENST00000561356 POGZQ7Z3K3 1410 aa14.29□□□□□ -0.12
TM2D3-214ENST00000561356 KIAA0556O60303 1618 aa14.29□□□□□ -0.12
TM2D3-214ENST00000561356 PHLDB1Q86UU1 1377 aa14.28□□□□□ -0.12
TM2D3-214ENST00000561356 NEO1Q92859 1461 aa14.28□□□□□ -0.12
TM2D3-214ENST00000561356 IGF1RP08069 1367 aa14.27□□□□□ -0.12
TM2D3-214ENST00000561356 AKNAQ7Z591 1439 aa14.24□□□□□ -0.13
TM2D3-214ENST00000561356 ALKQ9UM73 1620 aa14.23□□□□□ -0.13
TM2D3-214ENST00000561356 SCAF1Q9H7N4 1312 aaKnown RBP14.23□□□□□ -0.13
TM2D3-214ENST00000561356 ABCA8O94911 1581 aa14.23□□□□□ -0.13
TM2D3-214ENST00000561356 PIP4K2BP78356 416 aa14.23□□□□□ -0.13
TM2D3-214ENST00000561356 ZMYM4Q5VZL5 1548 aa14.22□□□□□ -0.13
TM2D3-214ENST00000561356 UGGT2Q9NYU1 1516 aa14.22□□□□□ -0.13
TM2D3-214ENST00000561356 ZFYVE16Q7Z3T8 1539 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms