RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 ABCA5Q8WWZ7 1642 aa13.31□□□□□ -0.28
ZEB1-223ENST00000561304 TRIM41Q8WV44 630 aa13.31□□□□□ -0.28
ZEB1-223ENST00000561304 SNAPC4Q5SXM2 1469 aa13.31□□□□□ -0.28
ZEB1-223ENST00000561304 TOP2BQ02880 1626 aa13.29□□□□□ -0.28
ZEB1-223ENST00000561304 ARHGEF11O15085 1522 aa13.28□□□□□ -0.28
ZEB1-223ENST00000561304 ABCA10Q8WWZ4 1543 aa13.26□□□□□ -0.29
ZEB1-223ENST00000561304 GRIN2BQ13224 1484 aa13.24□□□□□ -0.29
ZEB1-223ENST00000561304 MAGI1Q96QZ7 1491 aaPredicted RBP13.24□□□□□ -0.29
ZEB1-223ENST00000561304 U3KPZ7 1027 aaPredicted RBP13.24□□□□□ -0.29
ZEB1-223ENST00000561304 CLASP1Q7Z460 1538 aa13.23□□□□□ -0.29
ZEB1-223ENST00000561304 GAPVD1Q14C86 1478 aa13.23□□□□□ -0.29
ZEB1-223ENST00000561304 WRNQ14191 1432 aaPredicted RBP eCLIP13.22□□□□□ -0.29
ZEB1-223ENST00000561304 FBLN2P98095 1184 aa13.2□□□□□ -0.3
ZEB1-223ENST00000561304 SYNJ2O15056 1496 aa13.2□□□□□ -0.3
ZEB1-223ENST00000561304 ADAMTS12P58397 1594 aa13.19□□□□□ -0.3
ZEB1-223ENST00000561304 ARAP1Q96P48 1450 aa13.18□□□□□ -0.3
ZEB1-223ENST00000561304 FOXD4L1Q9NU39 408 aa13.15□□□□□ -0.3
ZEB1-223ENST00000561304 CHMP7Q8WUX9 453 aaPredicted RBP13.12□□□□□ -0.31
ZEB1-223ENST00000561304 CEP170Q5SW79 1584 aa13.11□□□□□ -0.31
ZEB1-223ENST00000561304 GRIN2AQ12879 1464 aa13.11□□□□□ -0.31
ZEB1-223ENST00000561304 ERICH3Q5RHP9 1530 aa13.1□□□□□ -0.31
ZEB1-223ENST00000561304 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.09□□□□□ -0.31
ZEB1-223ENST00000561304 HNRNPUL2Q1KMD3 747 aaKnown RBP13.09□□□□□ -0.31
ZEB1-223ENST00000561304 MYCNP04198 464 aaPredicted RBP13.08□□□□□ -0.31
ZEB1-223ENST00000561304 ERCC6L2Q5T890 1561 aa13.07□□□□□ -0.32
ZEB1-223ENST00000561304 CYB5RLQ6IPT4 315 aa13.07□□□□□ -0.32
ZEB1-223ENST00000561304 SHROOM2Q13796 1616 aa13.05□□□□□ -0.32
ZEB1-223ENST00000561304 NUP160Q12769 1436 aa13.05□□□□□ -0.32
ZEB1-223ENST00000561304 FHAD1B1AJZ9 1412 aa13.04□□□□□ -0.32
ZEB1-223ENST00000561304 ZBTB22O15209 634 aa13.03□□□□□ -0.32
ZEB1-223ENST00000561304 APLP2Q06481 763 aa13.03□□□□□ -0.32
ZEB1-223ENST00000561304 SAMD1Q6SPF0 538 aaPredicted RBP13.02□□□□□ -0.33
ZEB1-223ENST00000561304 RUSC2Q8N2Y8 1516 aa13.01□□□□□ -0.33
ZEB1-223ENST00000561304 CUL7Q14999 1698 aa12.99□□□□□ -0.33
ZEB1-223ENST00000561304 KIF27Q86VH2 1401 aa12.93□□□□□ -0.34
ZEB1-223ENST00000561304 IGF1RP08069 1367 aa12.91□□□□□ -0.34
ZEB1-223ENST00000561304 SPINK5Q9NQ38 1064 aaPredicted RBP12.9□□□□□ -0.34
ZEB1-223ENST00000561304 CAPN15O75808 1086 aa12.88□□□□□ -0.35
ZEB1-223ENST00000561304 PRG4Q92954 1404 aaPredicted RBP12.88□□□□□ -0.35
ZEB1-223ENST00000561304 KIF13AQ9H1H9 1805 aa12.85□□□□□ -0.35
ZEB1-223ENST00000561304 TRHP20396 242 aaPredicted RBP12.85□□□□□ -0.35
ZEB1-223ENST00000561304 EHMT2Q96KQ7 1210 aa12.84□□□□□ -0.35
ZEB1-223ENST00000561304 KIAA0586Q9BVV6 1533 aa12.84□□□□□ -0.35
ZEB1-223ENST00000561304 JPH4Q96JJ6 628 aa12.83□□□□□ -0.36
ZEB1-223ENST00000561304 ZNF219Q9P2Y4 722 aaPredicted RBP12.83□□□□□ -0.36
ZEB1-223ENST00000561304 ADCY10Q96PN6 1610 aa12.83□□□□□ -0.36
ZEB1-223ENST00000561304 CARMIL1Q5VZK9 1371 aa12.82□□□□□ -0.36
ZEB1-223ENST00000561304 CSRNP3Q8WYN3 585 aa12.81□□□□□ -0.36
ZEB1-223ENST00000561304 IQGAP2Q13576 1575 aa12.8□□□□□ -0.36
ZEB1-223ENST00000561304 CTTNBP2Q8WZ74 1663 aa12.8□□□□□ -0.36
ZEB1-223ENST00000561304 ATXN8OSP0DMR3 200 aa12.77□□□□□ -0.37
ZEB1-223ENST00000561304 RAPGEF2Q9Y4G8 1499 aa12.75□□□□□ -0.37
ZEB1-223ENST00000561304 DSG3P32926 999 aa12.72□□□□□ -0.37
ZEB1-223ENST00000561304 MAPKBP1O60336 1514 aa12.72□□□□□ -0.37
ZEB1-223ENST00000561304 DISP1Q96F81 1524 aa12.72□□□□□ -0.37
ZEB1-223ENST00000561304 DIP2BQ9P265 1576 aa12.72□□□□□ -0.37
ZEB1-223ENST00000561304 KIAA0556O60303 1618 aa12.71□□□□□ -0.37
ZEB1-223ENST00000561304 UGGT2Q9NYU1 1516 aa12.71□□□□□ -0.38
ZEB1-223ENST00000561304 PRXQ9BXM0 1461 aa12.68□□□□□ -0.38
ZEB1-223ENST00000561304 TSPOAP1O95153 1857 aa12.68□□□□□ -0.38
ZEB1-223ENST00000561304 ATF5Q9Y2D1 282 aaPredicted RBP12.67□□□□□ -0.38
ZEB1-223ENST00000561304 PTPRGP23470 1445 aa12.66□□□□□ -0.38
ZEB1-223ENST00000561304 CARMIL2Q6F5E8 1435 aa12.66□□□□□ -0.38
ZEB1-223ENST00000561304 TNIKQ9UKE5 1360 aa12.66□□□□□ -0.38
ZEB1-223ENST00000561304 ABCC10Q5T3U5 1492 aa12.66□□□□□ -0.38
ZEB1-223ENST00000561304 TTBK1Q5TCY1 1321 aaPredicted RBP12.64□□□□□ -0.39
ZEB1-223ENST00000561304 ABCC2Q92887 1545 aa12.64□□□□□ -0.39
ZEB1-223ENST00000561304 ZCCHC11Q5TAX3 1644 aaKnown RBP12.63□□□□□ -0.39
ZEB1-223ENST00000561304 PPRC1Q5VV67 1664 aaKnown RBP12.62□□□□□ -0.39
ZEB1-223ENST00000561304 UHRF1BP1LA0JNW5 1464 aa12.62□□□□□ -0.39
ZEB1-223ENST00000561304 UACAQ9BZF9 1416 aa12.59□□□□□ -0.39
ZEB1-223ENST00000561304 ABCB7O75027 752 aa12.58□□□□□ -0.4
ZEB1-223ENST00000561304 NPM1P06748 294 aaKnown RBP eCLIP12.58□□□□□ -0.4
ZEB1-223ENST00000561304 KDM5BQ9UGL1 1544 aa12.57□□□□□ -0.4
ZEB1-223ENST00000561304 FAM69CQ0P6D2 419 aa12.57□□□□□ -0.4
ZEB1-223ENST00000561304 ASXL2Q76L83 1435 aa12.57□□□□□ -0.4
ZEB1-223ENST00000561304 ABCA8O94911 1581 aa12.57□□□□□ -0.4
ZEB1-223ENST00000561304 SAMD9Q5K651 1589 aa12.57□□□□□ -0.4
ZEB1-223ENST00000561304 PLB1Q6P1J6 1458 aa12.56□□□□□ -0.4
ZEB1-223ENST00000561304 GOLGA3Q08378 1498 aa12.55□□□□□ -0.4
ZEB1-223ENST00000561304 GLI2P10070 1586 aa12.55□□□□□ -0.4
ZEB1-223ENST00000561304 MAP3K4Q9Y6R4 1608 aa12.55□□□□□ -0.4
ZEB1-223ENST00000561304 KDM6BO15054 1643 aa12.54□□□□□ -0.4
ZEB1-223ENST00000561304 KIF21BO75037 1637 aa12.53□□□□□ -0.4
ZEB1-223ENST00000561304 POLA2Q14181 598 aa12.53□□□□□ -0.4
ZEB1-223ENST00000561304 EEA1Q15075 1411 aa12.52□□□□□ -0.41
ZEB1-223ENST00000561304 EPRSP07814 1512 aaKnown RBP12.51□□□□□ -0.41
ZEB1-223ENST00000561304 WDR7Q9Y4E6 1490 aa12.48□□□□□ -0.41
ZEB1-223ENST00000561304 RAPGEF6Q8TEU7 1601 aa12.48□□□□□ -0.41
ZEB1-223ENST00000561304 FAM9AQ8IZU1 332 aaPredicted RBP12.47□□□□□ -0.41
ZEB1-223ENST00000561304 CFAP43Q8NDM7 1665 aa12.47□□□□□ -0.41
ZEB1-223ENST00000561304 P3H3Q8IVL6 736 aa12.44□□□□□ -0.42
ZEB1-223ENST00000561304 FHOD3Q2V2M9 1422 aa12.42□□□□□ -0.42
ZEB1-223ENST00000561304 COL17A1Q9UMD9 1497 aaPredicted RBP12.42□□□□□ -0.42
ZEB1-223ENST00000561304 ATP10BO94823 1461 aa12.41□□□□□ -0.42
ZEB1-223ENST00000561304 ZBTB12Q9Y330 459 aaPredicted RBP12.41□□□□□ -0.42
ZEB1-223ENST00000561304 EFCAB5A4FU69 1503 aa12.4□□□□□ -0.42
ZEB1-223ENST00000561304 NUP153P49790 1475 aaKnown RBP12.39□□□□□ -0.43
ZEB1-223ENST00000561304 ARID3CA6NKF2 412 aa12.39□□□□□ -0.43
ZEB1-223ENST00000561304 RANGAP1P46060 587 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms