RNA–Protein interactions for RNA: ENST00000561119.5

CRTC3-211, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 5

Gene CRTC3, Length 630 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-211ENST00000561119 GRIN2AQ12879 1464 aa18.11■□□□□ 0.49
CRTC3-211ENST00000561119 MAPKBP1O60336 1514 aa18.1■□□□□ 0.49
CRTC3-211ENST00000561119 PRG4Q92954 1404 aaPredicted RBP18.09■□□□□ 0.49
CRTC3-211ENST00000561119 SHROOM2Q13796 1616 aa18.08■□□□□ 0.48
CRTC3-211ENST00000561119 NUP160Q12769 1436 aa18.06■□□□□ 0.48
CRTC3-211ENST00000561119 CUX1P39880 1505 aa18.03■□□□□ 0.48
CRTC3-211ENST00000561119 ADCY10Q96PN6 1610 aa18.01■□□□□ 0.47
CRTC3-211ENST00000561119 JPH4Q96JJ6 628 aa17.99■□□□□ 0.47
CRTC3-211ENST00000561119 COL17A1Q9UMD9 1497 aaPredicted RBP17.99■□□□□ 0.47
CRTC3-211ENST00000561119 ABCA5Q8WWZ7 1642 aa17.94■□□□□ 0.46
CRTC3-211ENST00000561119 PPRC1Q5VV67 1664 aaKnown RBP17.93■□□□□ 0.46
CRTC3-211ENST00000561119 ADAMTS12P58397 1594 aa17.92■□□□□ 0.46
CRTC3-211ENST00000561119 TTBK1Q5TCY1 1321 aaPredicted RBP17.89■□□□□ 0.45
CRTC3-211ENST00000561119 TOP2BQ02880 1626 aa17.87■□□□□ 0.45
CRTC3-211ENST00000561119 ABCA10Q8WWZ4 1543 aa17.87■□□□□ 0.45
CRTC3-211ENST00000561119 CERKQ8TCT0 537 aa17.84■□□□□ 0.45
CRTC3-211ENST00000561119 SPATA31D1Q6ZQQ2 1576 aa17.83■□□□□ 0.44
CRTC3-211ENST00000561119 FHAD1B1AJZ9 1412 aa17.82■□□□□ 0.44
CRTC3-211ENST00000561119 ASXL2Q76L83 1435 aa17.76■□□□□ 0.43
CRTC3-211ENST00000561119 GLI2P10070 1586 aa17.72■□□□□ 0.43
CRTC3-211ENST00000561119 HSPA2P54652 639 aa17.72■□□□□ 0.43
CRTC3-211ENST00000561119 KIF21BO75037 1637 aa17.7■□□□□ 0.42
CRTC3-211ENST00000561119 PTPRMP28827 1452 aa17.69■□□□□ 0.42
CRTC3-211ENST00000561119 RUSC2Q8N2Y8 1516 aa17.69■□□□□ 0.42
CRTC3-211ENST00000561119 PLB1Q6P1J6 1458 aa17.68■□□□□ 0.42
CRTC3-211ENST00000561119 PCF11O94913 1555 aaKnown RBP17.67■□□□□ 0.42
CRTC3-211ENST00000561119 TEX14Q8IWB6 1497 aa17.65■□□□□ 0.42
CRTC3-211ENST00000561119 PLPPR3Q6T4P5 718 aa17.64■□□□□ 0.41
CRTC3-211ENST00000561119 PTPRGP23470 1445 aa17.64■□□□□ 0.41
CRTC3-211ENST00000561119 MAP3K4Q9Y6R4 1608 aa17.63■□□□□ 0.41
CRTC3-211ENST00000561119 ABCC2Q92887 1545 aa17.62■□□□□ 0.41
CRTC3-211ENST00000561119 CUL7Q14999 1698 aa17.62■□□□□ 0.41
CRTC3-211ENST00000561119 EPRSP07814 1512 aaKnown RBP17.61■□□□□ 0.41
CRTC3-211ENST00000561119 WRNQ14191 1432 aaPredicted RBP eCLIP17.59■□□□□ 0.41
CRTC3-211ENST00000561119 ERICH3Q5RHP9 1530 aa17.58■□□□□ 0.41
CRTC3-211ENST00000561119 ADAMTSL3P82987 1691 aa17.54■□□□□ 0.4
CRTC3-211ENST00000561119 ARID4BQ4LE39 1312 aaPredicted RBP17.47■□□□□ 0.39
CRTC3-211ENST00000561119 MADDQ8WXG6 1647 aa17.47■□□□□ 0.39
CRTC3-211ENST00000561119 KIAA0586Q9BVV6 1533 aa17.47■□□□□ 0.39
CRTC3-211ENST00000561119 TNIKQ9UKE5 1360 aa17.45■□□□□ 0.38
CRTC3-211ENST00000561119 KCNH8Q96L42 1107 aa17.44■□□□□ 0.38
CRTC3-211ENST00000561119 CD109Q6YHK3 1445 aa17.42■□□□□ 0.38
CRTC3-211ENST00000561119 UACAQ9BZF9 1416 aa17.42■□□□□ 0.38
CRTC3-211ENST00000561119 ZCCHC11Q5TAX3 1644 aaKnown RBP17.39■□□□□ 0.38
CRTC3-211ENST00000561119 RIMS1Q86UR5 1692 aaKnown RBP17.39■□□□□ 0.37
CRTC3-211ENST00000561119 UHRF1BP1LA0JNW5 1464 aa17.39■□□□□ 0.37
CRTC3-211ENST00000561119 BCORL1Q5H9F3 1711 aa17.38■□□□□ 0.37
CRTC3-211ENST00000561119 KDM5BQ9UGL1 1544 aa17.37■□□□□ 0.37
CRTC3-211ENST00000561119 CARMIL2Q6F5E8 1435 aa17.36■□□□□ 0.37
CRTC3-211ENST00000561119 RAPGEF3O95398 923 aa17.34■□□□□ 0.37
CRTC3-211ENST00000561119 MAGI3Q5TCQ9 1506 aa17.34■□□□□ 0.37
CRTC3-211ENST00000561119 WDR7Q9Y4E6 1490 aa17.33■□□□□ 0.37
CRTC3-211ENST00000561119 BIVM-ERCC5R4GMW8 1640 aa17.31■□□□□ 0.36
CRTC3-211ENST00000561119 CFAP43Q8NDM7 1665 aa17.27■□□□□ 0.36
CRTC3-211ENST00000561119 ARAP3Q8WWN8 1544 aa17.25■□□□□ 0.35
CRTC3-211ENST00000561119 MLECQ14165 292 aa17.23■□□□□ 0.35
CRTC3-211ENST00000561119 YEATS2Q9ULM3 1422 aa17.21■□□□□ 0.35
CRTC3-211ENST00000561119 DMRT2Q9Y5R5 561 aa17.21■□□□□ 0.35
CRTC3-211ENST00000561119 STRCQ7RTU9 1775 aa17.2■□□□□ 0.34
CRTC3-211ENST00000561119 IGF1RP08069 1367 aa17.19■□□□□ 0.34
CRTC3-211ENST00000561119 DISP1Q96F81 1524 aa17.19■□□□□ 0.34
CRTC3-211ENST00000561119 UBAP1LF5GYI3 381 aa17.18■□□□□ 0.34
CRTC3-211ENST00000561119 MED1Q15648 1581 aaPredicted RBP17.15■□□□□ 0.34
CRTC3-211ENST00000561119 ARID3CA6NKF2 412 aa17.15■□□□□ 0.34
CRTC3-211ENST00000561119 CEBPAP49715 358 aaPredicted RBP17.15■□□□□ 0.34
CRTC3-211ENST00000561119 IQGAP2Q13576 1575 aa17.15■□□□□ 0.34
CRTC3-211ENST00000561119 PHF23Q9BUL5 403 aaPredicted RBP17.13■□□□□ 0.33
CRTC3-211ENST00000561119 LTBP4Q8N2S1 1624 aa17.12■□□□□ 0.33
CRTC3-211ENST00000561119 FRMPD1Q5SYB0 1578 aa17.1■□□□□ 0.33
CRTC3-211ENST00000561119 SCAF1Q9H7N4 1312 aaKnown RBP17.08■□□□□ 0.32
CRTC3-211ENST00000561119 HSPA1LP34931 641 aa17.07■□□□□ 0.32
CRTC3-211ENST00000561119 PREX1Q8TCU6 1659 aa17.07■□□□□ 0.32
CRTC3-211ENST00000561119 CARMIL1Q5VZK9 1371 aa17.06■□□□□ 0.32
CRTC3-211ENST00000561119 SIGLEC1Q9BZZ2 1709 aa17.06■□□□□ 0.32
CRTC3-211ENST00000561119 FER1L4A9Z1Z3 1794 aa17.05■□□□□ 0.32
CRTC3-211ENST00000561119 POGZQ7Z3K3 1410 aa17.04■□□□□ 0.32
CRTC3-211ENST00000561119 ARHGEF40Q8TER5 1519 aa17.04■□□□□ 0.32
CRTC3-211ENST00000561119 PTPRTO14522 1441 aa17.04■□□□□ 0.32
CRTC3-211ENST00000561119 IQSEC2Q5JU85 1478 aa17.03■□□□□ 0.32
CRTC3-211ENST00000561119 PHLDB1Q86UU1 1377 aa17.02■□□□□ 0.31
CRTC3-211ENST00000561119 KIAA0556O60303 1618 aa17.01■□□□□ 0.31
CRTC3-211ENST00000561119 PIP4K2BP78356 416 aa17.01■□□□□ 0.31
CRTC3-211ENST00000561119 FANCAO15360 1455 aa17■□□□□ 0.31
CRTC3-211ENST00000561119 TTC37Q6PGP7 1564 aa17■□□□□ 0.31
CRTC3-211ENST00000561119 UHRF1BP1Q6BDS2 1440 aa16.98■□□□□ 0.31
CRTC3-211ENST00000561119 KIF27Q86VH2 1401 aa16.98■□□□□ 0.31
CRTC3-211ENST00000561119 ZNF335Q9H4Z2 1342 aaPredicted RBP16.97■□□□□ 0.31
CRTC3-211ENST00000561119 SENP3Q9H4L4 574 aaPredicted RBP16.97■□□□□ 0.31
CRTC3-211ENST00000561119 UGGT2Q9NYU1 1516 aa16.96■□□□□ 0.3
CRTC3-211ENST00000561119 AKNAQ7Z591 1439 aa16.96■□□□□ 0.3
CRTC3-211ENST00000561119 NEO1Q92859 1461 aa16.95■□□□□ 0.3
CRTC3-211ENST00000561119 ABCA8O94911 1581 aa16.93■□□□□ 0.3
CRTC3-211ENST00000561119 ABCA9Q8IUA7 1624 aa16.92■□□□□ 0.3
CRTC3-211ENST00000561119 DENND4BO75064 1496 aaPredicted RBP16.92■□□□□ 0.3
CRTC3-211ENST00000561119 RICTORQ6R327 1708 aa16.89■□□□□ 0.29
CRTC3-211ENST00000561119 ZFYVE16Q7Z3T8 1539 aa16.88■□□□□ 0.29
CRTC3-211ENST00000561119 NCKAP5LQ9HCH0 1330 aa16.87■□□□□ 0.29
CRTC3-211ENST00000561119 ATP10BO94823 1461 aa16.85■□□□□ 0.29
CRTC3-211ENST00000561119 ARHGEF12Q9NZN5 1544 aa16.85■□□□□ 0.29
CRTC3-211ENST00000561119 RGS17Q9UGC6 210 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 233.3 ms