RNA–Protein interactions for RNA: ENST00000561095.1

TICRR-203, Transcript of TOPBP1 interacting checkpoint and replication regulator, humanhuman

TSL 1 (best)

Gene TICRR, Length 2,367 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TICRR-203ENST00000561095 ERICH3Q5RHP9 1530 aa20.39■□□□□ 0.85
TICRR-203ENST00000561095 ERICH6BQ5W0A0 696 aa20.38■□□□□ 0.85
TICRR-203ENST00000561095 TIMELESSQ9UNS1 1208 aa20.35■□□□□ 0.85
TICRR-203ENST00000561095 IRX6P78412 446 aaPredicted RBP20.32■□□□□ 0.84
TICRR-203ENST00000561095 SIN3AQ96ST3 1273 aa20.31■□□□□ 0.84
TICRR-203ENST00000561095 PRXQ9BXM0 1461 aa20.31■□□□□ 0.84
TICRR-203ENST00000561095 SETD5Q9C0A6 1442 aa20.31■□□□□ 0.84
TICRR-203ENST00000561095 PPP4R2Q9NY27 417 aa20.3■□□□□ 0.84
TICRR-203ENST00000561095 NOP58Q9Y2X3 529 aaKnown RBP20.29■□□□□ 0.84
TICRR-203ENST00000561095 HIRIP3Q9BW71 556 aaPredicted RBP20.28■□□□□ 0.84
TICRR-203ENST00000561095 HNRNPUQ00839 825 aaKnown RBP eCLIP20.25■□□□□ 0.83
TICRR-203ENST00000561095 TOP2BQ02880 1626 aa20.24■□□□□ 0.83
TICRR-203ENST00000561095 SALL2Q9Y467 1007 aaPredicted RBP20.23■□□□□ 0.83
TICRR-203ENST00000561095 PAK3O75914 559 aaPredicted RBP20.22■□□□□ 0.83
TICRR-203ENST00000561095 PEG3Q9GZU2 1588 aa20.22■□□□□ 0.83
TICRR-203ENST00000561095 NBR1Q14596 966 aa20.21■□□□□ 0.83
TICRR-203ENST00000561095 BICRAQ9NZM4 1560 aa20.18■□□□□ 0.82
TICRR-203ENST00000561095 ARHGAP35Q9NRY4 1499 aa20.16■□□□□ 0.82
TICRR-203ENST00000561095 BIVM-ERCC5R4GMW8 1640 aa20.15■□□□□ 0.82
TICRR-203ENST00000561095 MAP3K1Q13233 1512 aa20.14■□□□□ 0.81
TICRR-203ENST00000561095 B4GALNT3Q6L9W6 998 aa20.13■□□□□ 0.81
TICRR-203ENST00000561095 TIAM1Q13009 1591 aa20.12■□□□□ 0.81
TICRR-203ENST00000561095 IL27Q8NEV9 243 aa20.07■□□□□ 0.8
TICRR-203ENST00000561095 PHLDB1Q86UU1 1377 aa20.05■□□□□ 0.8
TICRR-203ENST00000561095 IPO9Q96P70 1041 aaKnown RBP20.05■□□□□ 0.8
TICRR-203ENST00000561095 RTL5Q5HYW3 569 aaPredicted RBP20.04■□□□□ 0.8
TICRR-203ENST00000561095 LRRC9Q6ZRR7 1453 aa20.03■□□□□ 0.8
TICRR-203ENST00000561095 CCDC136Q96JN2 1154 aa20.01■□□□□ 0.79
TICRR-203ENST00000561095 FHAD1B1AJZ9 1412 aa20.01■□□□□ 0.79
TICRR-203ENST00000561095 WASHC2AQ641Q2 1341 aa20■□□□□ 0.79
TICRR-203ENST00000561095 TONSLQ96HA7 1378 aa20■□□□□ 0.79
TICRR-203ENST00000561095 ANP32AP39687 249 aaKnown RBP19.98■□□□□ 0.79
TICRR-203ENST00000561095 UBE2Q2Q8WVN8 375 aa19.98■□□□□ 0.79
TICRR-203ENST00000561095 ZBED9Q6R2W3 1325 aa19.97■□□□□ 0.79
TICRR-203ENST00000561095 NCAPD3P42695 1498 aa19.96■□□□□ 0.79
TICRR-203ENST00000561095 KDM5BQ9UGL1 1544 aa19.96■□□□□ 0.79
TICRR-203ENST00000561095 ZBTB47Q9UFB7 747 aaPredicted RBP19.95■□□□□ 0.78
TICRR-203ENST00000561095 FAM50AQ14320 339 aaKnown RBP19.95■□□□□ 0.78
TICRR-203ENST00000561095 CCDC184Q52MB2 194 aa19.95■□□□□ 0.78
TICRR-203ENST00000561095 NCOA2Q15596 1464 aa19.94■□□□□ 0.78
TICRR-203ENST00000561095 KIF27Q86VH2 1401 aa19.92■□□□□ 0.78
TICRR-203ENST00000561095 CFAP43Q8NDM7 1665 aa19.92■□□□□ 0.78
TICRR-203ENST00000561095 RTN4Q9NQC3 1192 aaKnown RBP19.92■□□□□ 0.78
TICRR-203ENST00000561095 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.9■□□□□ 0.784e-10■■■■■ 27.4
TICRR-203ENST00000561095 C11orf95C9JLR9 678 aaPredicted RBP19.89■□□□□ 0.77
TICRR-203ENST00000561095 ATAD2BQ9ULI0 1458 aa19.88■□□□□ 0.77
TICRR-203ENST00000561095 CNTLNQ9NXG0 1405 aa19.88■□□□□ 0.77
TICRR-203ENST00000561095 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.87■□□□□ 0.77
TICRR-203ENST00000561095 WASHC2CQ9Y4E1 1318 aa19.86■□□□□ 0.77
TICRR-203ENST00000561095 RNF123Q5XPI4 1314 aa19.85■□□□□ 0.77
TICRR-203ENST00000561095 UACAQ9BZF9 1416 aa19.84■□□□□ 0.77
TICRR-203ENST00000561095 USP35Q9P2H5 1018 aa19.84■□□□□ 0.77
TICRR-203ENST00000561095 CUX1P39880 1505 aa19.83■□□□□ 0.77
TICRR-203ENST00000561095 FAM9BQ8IZU0 186 aa19.83■□□□□ 0.77
TICRR-203ENST00000561095 PRKRIP1Q9H875 184 aaPredicted RBP19.83■□□□□ 0.77
TICRR-203ENST00000561095 CCDC18Q5T9S5 1454 aa19.82■□□□□ 0.76
TICRR-203ENST00000561095 SMG6Q86US8 1419 aaKnown RBP19.82■□□□□ 0.76
TICRR-203ENST00000561095 HSPA5P11021 654 aaKnown RBP19.82■□□□□ 0.76
TICRR-203ENST00000561095 AKNAQ7Z591 1439 aa19.8■□□□□ 0.76
TICRR-203ENST00000561095 MRS2Q9HD23 443 aa19.79■□□□□ 0.76
TICRR-203ENST00000561095 PCF11O94913 1555 aaKnown RBP19.77■□□□□ 0.76
TICRR-203ENST00000561095 HFM1A2PYH4 1435 aa19.77■□□□□ 0.75
TICRR-203ENST00000561095 PTPN23Q9H3S7 1636 aa19.76■□□□□ 0.75
TICRR-203ENST00000561095 NEFMP07197 916 aa19.75■□□□□ 0.75
TICRR-203ENST00000561095 NCOA1Q15788 1441 aa19.73■□□□□ 0.75
TICRR-203ENST00000561095 EIF4G2P78344 907 aaKnown RBP eCLIP19.71■□□□□ 0.75
TICRR-203ENST00000561095 NUDCQ9Y266 331 aa19.71■□□□□ 0.75
TICRR-203ENST00000561095 CCDC7Q96M83 1385 aa19.71■□□□□ 0.75
TICRR-203ENST00000561095 AQRO60306 1485 aaKnown RBP eCLIP19.7■□□□□ 0.741e-7■■■■□ 21.1
TICRR-203ENST00000561095 PTPRKQ15262 1439 aa19.69■□□□□ 0.74
TICRR-203ENST00000561095 LAS1LQ9Y4W2 734 aaKnown RBP19.69■□□□□ 0.74
TICRR-203ENST00000561095 FGD6Q6ZV73 1430 aa19.68■□□□□ 0.74
TICRR-203ENST00000561095 PPM1GO15355 546 aaPredicted RBP19.67■□□□□ 0.74
TICRR-203ENST00000561095 ABCA5Q8WWZ7 1642 aa19.67■□□□□ 0.74
TICRR-203ENST00000561095 NAIPQ13075 1403 aa19.66■□□□□ 0.74
TICRR-203ENST00000561095 IGF1RP08069 1367 aa19.66■□□□□ 0.74
TICRR-203ENST00000561095 POLR1AO95602 1720 aaPredicted RBP19.66■□□□□ 0.74
TICRR-203ENST00000561095 BRPF3Q9ULD4 1205 aa19.65■□□□□ 0.74
TICRR-203ENST00000561095 PABPN1Q86U42 306 aaKnown RBP eCLIP19.65■□□□□ 0.74
TICRR-203ENST00000561095 FYCO1Q9BQS8 1478 aa19.64■□□□□ 0.73
TICRR-203ENST00000561095 TCERG1O14776 1098 aaKnown RBP19.62■□□□□ 0.73
TICRR-203ENST00000561095 NPM2Q86SE8 214 aaKnown RBP19.62■□□□□ 0.73
TICRR-203ENST00000561095 GSE1Q14687 1217 aa19.6■□□□□ 0.73
TICRR-203ENST00000561095 FMN1Q68DA7 1419 aa19.6■□□□□ 0.73
TICRR-203ENST00000561095 DENND4BO75064 1496 aaPredicted RBP19.6■□□□□ 0.73
TICRR-203ENST00000561095 PDE4AP27815 886 aa19.59■□□□□ 0.73
TICRR-203ENST00000561095 BACH2Q9BYV9 841 aa19.59■□□□□ 0.73
TICRR-203ENST00000561095 CASKIN1Q8WXD9 1431 aa19.58■□□□□ 0.72
TICRR-203ENST00000561095 CARMIL1Q5VZK9 1371 aa19.57■□□□□ 0.72
TICRR-203ENST00000561095 HECW1Q76N89 1606 aa19.57■□□□□ 0.72
TICRR-203ENST00000561095 FGD5Q6ZNL6 1462 aa19.55■□□□□ 0.72
TICRR-203ENST00000561095 MS4A1P11836 297 aa19.55■□□□□ 0.72
TICRR-203ENST00000561095 KIF7Q2M1P5 1343 aa19.54■□□□□ 0.72
TICRR-203ENST00000561095 EIF5BO60841 1220 aaKnown RBP19.54■□□□□ 0.72
TICRR-203ENST00000561095 SPATA31E1Q6ZUB1 1445 aa19.53■□□□□ 0.72
TICRR-203ENST00000561095 ATP1B4Q9UN42 357 aaPredicted RBP19.52■□□□□ 0.72
TICRR-203ENST00000561095 FHOD3Q2V2M9 1422 aa19.51■□□□□ 0.71
TICRR-203ENST00000561095 DHX29Q7Z478 1369 aaKnown RBP19.5■□□□□ 0.71
TICRR-203ENST00000561095 P3H3Q8IVL6 736 aa19.5■□□□□ 0.71
TICRR-203ENST00000561095 L3MBTL2Q969R5 705 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 360 ms