RNA–Protein interactions for RNA: ENST00000561024.1

PDE8A-214, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-214ENST00000561024 ADRA2BP18089 450 aa7.14□□□□□ -1.27
PDE8A-214ENST00000561024 DMRT2Q9Y5R5 561 aa7.14□□□□□ -1.27
PDE8A-214ENST00000561024 BCANQ96GW7 911 aa7.12□□□□□ -1.27
PDE8A-214ENST00000561024 ABCC8Q09428 1581 aa7.12□□□□□ -1.27
PDE8A-214ENST00000561024 SP7Q8TDD2 431 aaPredicted RBP7.11□□□□□ -1.27
PDE8A-214ENST00000561024 TPRNQ4KMQ1 711 aa7.11□□□□□ -1.27
PDE8A-214ENST00000561024 DNMBPQ6XZF7 1577 aa7.1□□□□□ -1.27
PDE8A-214ENST00000561024 ZNF316A6NFI3 1004 aaPredicted RBP7.09□□□□□ -1.27
PDE8A-214ENST00000561024 URB2Q14146 1524 aaKnown RBP7.09□□□□□ -1.27
PDE8A-214ENST00000561024 PLEKHG5O94827 1062 aa7.07□□□□□ -1.28
PDE8A-214ENST00000561024 YTHDC1Q96MU7 727 aaKnown RBP7.07□□□□□ -1.28
PDE8A-214ENST00000561024 TOPBP1Q92547 1522 aa7.07□□□□□ -1.28
PDE8A-214ENST00000561024 WDR97A6NE52 1622 aa7.07□□□□□ -1.28
PDE8A-214ENST00000561024 WRNQ14191 1432 aaPredicted RBP eCLIP7.04□□□□□ -1.28
PDE8A-214ENST00000561024 IFT140Q96RY7 1462 aa7.04□□□□□ -1.28
PDE8A-214ENST00000561024 BIVM-ERCC5R4GMW8 1640 aa7.02□□□□□ -1.29
PDE8A-214ENST00000561024 MIER1Q8N108 512 aa7.01□□□□□ -1.29
PDE8A-214ENST00000561024 TARBP1Q13395 1621 aaKnown RBP7.01□□□□□ -1.29
PDE8A-214ENST00000561024 CUX1P39880 1505 aa7.01□□□□□ -1.29
PDE8A-214ENST00000561024 BCL11AQ9H165 835 aa7□□□□□ -1.29
PDE8A-214ENST00000561024 POLA1P09884 1462 aaPredicted RBP6.99□□□□□ -1.29
PDE8A-214ENST00000561024 NPM2Q86SE8 214 aaKnown RBP6.99□□□□□ -1.29
PDE8A-214ENST00000561024 TOP2BQ02880 1626 aa6.99□□□□□ -1.29
PDE8A-214ENST00000561024 CEP162Q5TB80 1403 aa6.98□□□□□ -1.29
PDE8A-214ENST00000561024 EIF4G3O43432 1585 aaKnown RBP6.98□□□□□ -1.29
PDE8A-214ENST00000561024 FGD5Q6ZNL6 1462 aa6.97□□□□□ -1.29
PDE8A-214ENST00000561024 CLSPNQ9HAW4 1339 aa6.97□□□□□ -1.29
PDE8A-214ENST00000561024 PLCB2Q00722 1185 aa6.96□□□□□ -1.3
PDE8A-214ENST00000561024 TNIKQ9UKE5 1360 aa6.95□□□□□ -1.3
PDE8A-214ENST00000561024 SYNJ1O43426 1573 aa6.95□□□□□ -1.3
PDE8A-214ENST00000561024 ABCA10Q8WWZ4 1543 aa6.95□□□□□ -1.3
PDE8A-214ENST00000561024 ABCA5Q8WWZ7 1642 aa6.95□□□□□ -1.3
PDE8A-214ENST00000561024 ZNF608Q9ULD9 1512 aaPredicted RBP6.93□□□□□ -1.3
PDE8A-214ENST00000561024 SOGA1O94964 1423 aa6.93□□□□□ -1.3
PDE8A-214ENST00000561024 C14orf37Q86TY3 774 aa6.92□□□□□ -1.3
PDE8A-214ENST00000561024 PBRM1Q86U86 1689 aa6.92□□□□□ -1.3
PDE8A-214ENST00000561024 SUPT16HQ9Y5B9 1047 aaKnown RBP6.92□□□□□ -1.3
PDE8A-214ENST00000561024 MAGI1Q96QZ7 1491 aaPredicted RBP6.92□□□□□ -1.3
PDE8A-214ENST00000561024 UBTFP17480 764 aaKnown RBP6.91□□□□□ -1.3
PDE8A-214ENST00000561024 RAD54L2Q9Y4B4 1467 aa6.9□□□□□ -1.3
PDE8A-214ENST00000561024 HNRNPUL2Q1KMD3 747 aaKnown RBP6.9□□□□□ -1.3
PDE8A-214ENST00000561024 ANP32EQ9BTT0 268 aa6.9□□□□□ -1.3
PDE8A-214ENST00000561024 GRIN2BQ13224 1484 aa6.9□□□□□ -1.31
PDE8A-214ENST00000561024 EEA1Q15075 1411 aa6.9□□□□□ -1.31
PDE8A-214ENST00000561024 ERICH3Q5RHP9 1530 aa6.89□□□□□ -1.31
PDE8A-214ENST00000561024 CHD1O14646 1710 aa6.88□□□□□ -1.31
PDE8A-214ENST00000561024 DCAF8L1A6NGE4 600 aa6.88□□□□□ -1.31
PDE8A-214ENST00000561024 HAP1P54257 671 aaPredicted RBP6.88□□□□□ -1.31
PDE8A-214ENST00000561024 GAPVD1Q14C86 1478 aa6.88□□□□□ -1.31
PDE8A-214ENST00000561024 ADAMTS12P58397 1594 aa6.88□□□□□ -1.31
PDE8A-214ENST00000561024 MAPK8IP2Q13387 824 aaPredicted RBP6.87□□□□□ -1.31
PDE8A-214ENST00000561024 TSHZ2Q9NRE2 1034 aa6.87□□□□□ -1.31
PDE8A-214ENST00000561024 FBXO3Q9UK99 471 aa6.87□□□□□ -1.31
PDE8A-214ENST00000561024 AQRO60306 1485 aaKnown RBP eCLIP6.86□□□□□ -1.31
PDE8A-214ENST00000561024 GOLGA3Q08378 1498 aa6.86□□□□□ -1.31
PDE8A-214ENST00000561024 SNAPC4Q5SXM2 1469 aa6.86□□□□□ -1.31
PDE8A-214ENST00000561024 TMEM132AQ24JP5 1023 aa6.86□□□□□ -1.31
PDE8A-214ENST00000561024 DNAJC5Q9H3Z4 198 aa6.86□□□□□ -1.31
PDE8A-214ENST00000561024 SYNJ2O15056 1496 aa6.86□□□□□ -1.31
PDE8A-214ENST00000561024 CUL7Q14999 1698 aa6.85□□□□□ -1.31
PDE8A-214ENST00000561024 SLC4A1APQ9BWU0 796 aaKnown RBP6.85□□□□□ -1.31
PDE8A-214ENST00000561024 TDRD9Q8NDG6 1382 aaKnown RBP6.84□□□□□ -1.31
PDE8A-214ENST00000561024 CLASP1Q7Z460 1538 aa6.84□□□□□ -1.31
PDE8A-214ENST00000561024 RUSC2Q8N2Y8 1516 aa6.83□□□□□ -1.32
PDE8A-214ENST00000561024 FHAD1B1AJZ9 1412 aa6.82□□□□□ -1.32
PDE8A-214ENST00000561024 KIF27Q86VH2 1401 aa6.81□□□□□ -1.32
PDE8A-214ENST00000561024 GRIN2AQ12879 1464 aa6.81□□□□□ -1.32
PDE8A-214ENST00000561024 CLIP1P30622 1438 aa6.81□□□□□ -1.32
PDE8A-214ENST00000561024 VPS8Q8N3P4 1428 aa6.8□□□□□ -1.32
PDE8A-214ENST00000561024 OSCARQ8IYS5 282 aa6.8□□□□□ -1.32
PDE8A-214ENST00000561024 NUP160Q12769 1436 aa6.8□□□□□ -1.32
PDE8A-214ENST00000561024 PDIA4P13667 645 aaKnown RBP6.79□□□□□ -1.32
PDE8A-214ENST00000561024 SHROOM2Q13796 1616 aa6.78□□□□□ -1.32
PDE8A-214ENST00000561024 DHX57Q6P158 1386 aaKnown RBP6.78□□□□□ -1.32
PDE8A-214ENST00000561024 CEP170Q5SW79 1584 aa6.77□□□□□ -1.33
PDE8A-214ENST00000561024 RIMBP3CA6NJZ7 1639 aa6.77□□□□□ -1.33
PDE8A-214ENST00000561024 RIMBP3BA6NNM3 1639 aa6.77□□□□□ -1.33
PDE8A-214ENST00000561024 KIF21BO75037 1637 aa6.77□□□□□ -1.33
PDE8A-214ENST00000561024 RIMBP3Q9UFD9 1639 aa6.77□□□□□ -1.33
PDE8A-214ENST00000561024 ARHGEF11O15085 1522 aa6.77□□□□□ -1.33
PDE8A-214ENST00000561024 IGF1RP08069 1367 aa6.74□□□□□ -1.33
PDE8A-214ENST00000561024 FKBP8Q14318 412 aa6.74□□□□□ -1.33
PDE8A-214ENST00000561024 CHMP7Q8WUX9 453 aaPredicted RBP6.74□□□□□ -1.33
PDE8A-214ENST00000561024 UBE2Q2Q8WVN8 375 aa6.73□□□□□ -1.33
PDE8A-214ENST00000561024 RBM19Q9Y4C8 960 aaKnown RBP6.73□□□□□ -1.33
PDE8A-214ENST00000561024 NEFLP07196 543 aa6.72□□□□□ -1.33
PDE8A-214ENST00000561024 KIAA0586Q9BVV6 1533 aa6.72□□□□□ -1.33
PDE8A-214ENST00000561024 KCNH8Q96L42 1107 aa6.72□□□□□ -1.33
PDE8A-214ENST00000561024 CTTNBP2Q8WZ74 1663 aa6.71□□□□□ -1.34
PDE8A-214ENST00000561024 PRXQ9BXM0 1461 aa6.71□□□□□ -1.34
PDE8A-214ENST00000561024 RAPGEF2Q9Y4G8 1499 aa6.71□□□□□ -1.34
PDE8A-214ENST00000561024 CARMIL1Q5VZK9 1371 aa6.71□□□□□ -1.34
PDE8A-214ENST00000561024 ARAP1Q96P48 1450 aa6.71□□□□□ -1.34
PDE8A-214ENST00000561024 IQGAP2Q13576 1575 aa6.7□□□□□ -1.34
PDE8A-214ENST00000561024 VSIG10Q8N0Z9 540 aa6.7□□□□□ -1.34
PDE8A-214ENST00000561024 FBLN2P98095 1184 aa6.69□□□□□ -1.34
PDE8A-214ENST00000561024 CHMP4AQ9BY43 222 aa6.69□□□□□ -1.34
PDE8A-214ENST00000561024 PCDH10Q9P2E7 1040 aa6.68□□□□□ -1.34
PDE8A-214ENST00000561024 UGGT2Q9NYU1 1516 aa6.68□□□□□ -1.34
PDE8A-214ENST00000561024 RRBP1Q9P2E9 1410 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms