RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 PRXQ9BXM0 1461 aa27.84■■■□□ 2.05
RPL28-211ENST00000560881 CSRNP3Q8WYN3 585 aa27.83■■■□□ 2.05
RPL28-211ENST00000560881 SHROOM2Q13796 1616 aa27.78■■■□□ 2.04
RPL28-211ENST00000560881 ERCC6L2Q5T890 1561 aa27.75■■■□□ 2.03
RPL28-211ENST00000560881 KIAA0586Q9BVV6 1533 aa27.74■■■□□ 2.03
RPL28-211ENST00000560881 CTTNBP2Q8WZ74 1663 aa27.68■■■□□ 2.02
RPL28-211ENST00000560881 ARAP1Q96P48 1450 aa27.68■■■□□ 2.02
RPL28-211ENST00000560881 JPH4Q96JJ6 628 aa27.68■■■□□ 2.02
RPL28-211ENST00000560881 IQGAP2Q13576 1575 aa27.67■■■□□ 2.02
RPL28-211ENST00000560881 KIF21BO75037 1637 aa27.65■■■□□ 2.02
RPL28-211ENST00000560881 PRG4Q92954 1404 aaPredicted RBP27.64■■■□□ 2.02
RPL28-211ENST00000560881 EHMT2Q96KQ7 1210 aa27.6■■■□□ 2.01
RPL28-211ENST00000560881 CYB5RLQ6IPT4 315 aa27.59■■■□□ 2.01
RPL28-211ENST00000560881 UGGT2Q9NYU1 1516 aa27.5■■□□□ 1.99
RPL28-211ENST00000560881 GOLGA3Q08378 1498 aa27.48■■□□□ 1.99
RPL28-211ENST00000560881 DISP1Q96F81 1524 aa27.47■■□□□ 1.99
RPL28-211ENST00000560881 KIAA0556O60303 1618 aa27.43■■□□□ 1.98
RPL28-211ENST00000560881 CARMIL2Q6F5E8 1435 aa27.41■■□□□ 1.98
RPL28-211ENST00000560881 TTBK1Q5TCY1 1321 aaPredicted RBP27.39■■□□□ 1.97
RPL28-211ENST00000560881 UBTFP17480 764 aaKnown RBP27.38■■□□□ 1.97
RPL28-211ENST00000560881 RANGAP1P46060 587 aaPredicted RBP27.36■■□□□ 1.97
RPL28-211ENST00000560881 TNIKQ9UKE5 1360 aa27.34■■□□□ 1.97
RPL28-211ENST00000560881 PTPRGP23470 1445 aa27.3■■□□□ 1.96
RPL28-211ENST00000560881 SAMD9Q5K651 1589 aa27.3■■□□□ 1.96
RPL28-211ENST00000560881 P3H3Q8IVL6 736 aa27.27■■□□□ 1.96
RPL28-211ENST00000560881 ADCY10Q96PN6 1610 aa27.26■■□□□ 1.95
RPL28-211ENST00000560881 FHOD3Q2V2M9 1422 aa27.18■■□□□ 1.94
RPL28-211ENST00000560881 EFCAB5A4FU69 1503 aa27.17■■□□□ 1.94
RPL28-211ENST00000560881 PLB1Q6P1J6 1458 aa27.15■■□□□ 1.94
RPL28-211ENST00000560881 LOC105371045A0A1W2PR82 267 aa27.14■■□□□ 1.93
RPL28-211ENST00000560881 UACAQ9BZF9 1416 aa27.13■■□□□ 1.93
RPL28-211ENST00000560881 ARHGAP35Q9NRY4 1499 aa27.12■■□□□ 1.93
RPL28-211ENST00000560881 ABCC2Q92887 1545 aa27.11■■□□□ 1.93
RPL28-211ENST00000560881 ABCA8O94911 1581 aa27.09■■□□□ 1.93
RPL28-211ENST00000560881 UHRF1BP1LA0JNW5 1464 aa27.08■■□□□ 1.93
RPL28-211ENST00000560881 RAPGEF6Q8TEU7 1601 aa27.01■■□□□ 1.91
RPL28-211ENST00000560881 ZCCHC11Q5TAX3 1644 aaKnown RBP27■■□□□ 1.91
RPL28-211ENST00000560881 NPM1P06748 294 aaKnown RBP eCLIP27■■□□□ 1.91
RPL28-211ENST00000560881 CLIP1P30622 1438 aa27■■□□□ 1.91
RPL28-211ENST00000560881 KDM5BQ9UGL1 1544 aa26.98■■□□□ 1.91
RPL28-211ENST00000560881 MAPKBP1O60336 1514 aa26.96■■□□□ 1.91
RPL28-211ENST00000560881 ARID3CA6NKF2 412 aa26.95■■□□□ 1.91
RPL28-211ENST00000560881 CEP162Q5TB80 1403 aa26.95■■□□□ 1.9
RPL28-211ENST00000560881 TRHP20396 242 aaPredicted RBP26.95■■□□□ 1.9
RPL28-211ENST00000560881 NUP153P49790 1475 aaKnown RBP26.9■■□□□ 1.9
RPL28-211ENST00000560881 FMN1Q68DA7 1419 aa26.89■■□□□ 1.89
RPL28-211ENST00000560881 KIF13AQ9H1H9 1805 aa26.88■■□□□ 1.89
RPL28-211ENST00000560881 ASXL2Q76L83 1435 aa26.88■■□□□ 1.89
RPL28-211ENST00000560881 ATP10BO94823 1461 aa26.86■■□□□ 1.89
RPL28-211ENST00000560881 DIP2BQ9P265 1576 aa26.84■■□□□ 1.89
RPL28-211ENST00000560881 PCF11O94913 1555 aaKnown RBP26.84■■□□□ 1.89
RPL28-211ENST00000560881 ABCC10Q5T3U5 1492 aa26.81■■□□□ 1.88
RPL28-211ENST00000560881 HECW1Q76N89 1606 aa26.8■■□□□ 1.88
RPL28-211ENST00000560881 LRRIQ1Q96JM4 1722 aa26.8■■□□□ 1.88
RPL28-211ENST00000560881 ATP1B4Q9UN42 357 aaPredicted RBP26.79■■□□□ 1.88
RPL28-211ENST00000560881 CDK13Q14004 1512 aaKnown RBP26.79■■□□□ 1.88
RPL28-211ENST00000560881 WDR7Q9Y4E6 1490 aa26.77■■□□□ 1.88
RPL28-211ENST00000560881 FAM69CQ0P6D2 419 aa26.76■■□□□ 1.87
RPL28-211ENST00000560881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.75■■□□□ 1.87
RPL28-211ENST00000560881 HNRNPUL2Q1KMD3 747 aaKnown RBP26.75■■□□□ 1.87
RPL28-211ENST00000560881 EPRSP07814 1512 aaKnown RBP26.73■■□□□ 1.87
RPL28-211ENST00000560881 CASKIN1Q8WXD9 1431 aa26.73■■□□□ 1.87
RPL28-211ENST00000560881 FYCO1Q9BQS8 1478 aa26.69■■□□□ 1.86
RPL28-211ENST00000560881 TSPOAP1O95153 1857 aa26.69■■□□□ 1.86
RPL28-211ENST00000560881 KCNH8Q96L42 1107 aa26.66■■□□□ 1.86
RPL28-211ENST00000560881 GLI2P10070 1586 aa26.66■■□□□ 1.86
RPL28-211ENST00000560881 MAP3K4Q9Y6R4 1608 aa26.61■■□□□ 1.85
RPL28-211ENST00000560881 CCDC18Q5T9S5 1454 aa26.59■■□□□ 1.85
RPL28-211ENST00000560881 VPS8Q8N3P4 1428 aa26.59■■□□□ 1.85
RPL28-211ENST00000560881 PPRC1Q5VV67 1664 aaKnown RBP26.58■■□□□ 1.85
RPL28-211ENST00000560881 PLEKHD1A6NEE1 506 aa26.58■■□□□ 1.85
RPL28-211ENST00000560881 CFAP43Q8NDM7 1665 aa26.55■■□□□ 1.84
RPL28-211ENST00000560881 MAGI3Q5TCQ9 1506 aa26.54■■□□□ 1.84
RPL28-211ENST00000560881 ABCA9Q8IUA7 1624 aa26.54■■□□□ 1.84
RPL28-211ENST00000560881 KIF14Q15058 1648 aa26.51■■□□□ 1.83
RPL28-211ENST00000560881 TTC37Q6PGP7 1564 aa26.49■■□□□ 1.83
RPL28-211ENST00000560881 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.49■■□□□ 1.83
RPL28-211ENST00000560881 TROQ12816 1431 aaPredicted RBP26.49■■□□□ 1.83
RPL28-211ENST00000560881 CD109Q6YHK3 1445 aa26.49■■□□□ 1.83
RPL28-211ENST00000560881 CDK11AQ9UQ88 783 aaPredicted RBP26.47■■□□□ 1.83
RPL28-211ENST00000560881 TIAM1Q13009 1591 aa26.41■■□□□ 1.82
RPL28-211ENST00000560881 TEX14Q8IWB6 1497 aa26.39■■□□□ 1.81
RPL28-211ENST00000560881 MTUS2Q5JR59 1369 aa26.36■■□□□ 1.81
RPL28-211ENST00000560881 MYO5CQ9NQX4 1742 aa26.35■■□□□ 1.81
RPL28-211ENST00000560881 KDM6BO15054 1643 aa26.34■■□□□ 1.81
RPL28-211ENST00000560881 EHBP1L1Q8N3D4 1523 aa26.33■■□□□ 1.81
RPL28-211ENST00000560881 COL17A1Q9UMD9 1497 aaPredicted RBP26.29■■□□□ 1.8
RPL28-211ENST00000560881 CDC42BPAQ5VT25 1732 aa26.27■■□□□ 1.8
RPL28-211ENST00000560881 MAP3K1Q13233 1512 aa26.27■■□□□ 1.8
RPL28-211ENST00000560881 CDC42BPBQ9Y5S2 1711 aa26.27■■□□□ 1.8
RPL28-211ENST00000560881 FANCAO15360 1455 aa26.27■■□□□ 1.8
RPL28-211ENST00000560881 LRRC9Q6ZRR7 1453 aa26.27■■□□□ 1.8
RPL28-211ENST00000560881 PLCH2O75038 1416 aa26.26■■□□□ 1.79
RPL28-211ENST00000560881 KANK4Q5T7N3 995 aaPredicted RBP26.26■■□□□ 1.79
RPL28-211ENST00000560881 PREX2Q70Z35 1606 aa26.25■■□□□ 1.79
RPL28-211ENST00000560881 SUPT6HQ7KZ85 1726 aaKnown RBP26.23■■□□□ 1.79
RPL28-211ENST00000560881 NEO1Q92859 1461 aa26.23■■□□□ 1.79
RPL28-211ENST00000560881 ARHGAP5Q13017 1502 aa26.23■■□□□ 1.79
RPL28-211ENST00000560881 CFAP74Q9C0B2 1584 aa26.23■■□□□ 1.79
RPL28-211ENST00000560881 ARAP3Q8WWN8 1544 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms