RNA–Protein interactions for RNA: ENST00000560563.1

ACTC1-203, Transcript of actin, alpha, cardiac muscle 1, humanhuman

TSL 2

Gene ACTC1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-203ENST00000560563 KIF21AQ7Z4S6 1674 aa14.16□□□□□ -0.14
ACTC1-203ENST00000560563 PITPNM1O00562 1244 aa14.14□□□□□ -0.15
ACTC1-203ENST00000560563 ZNF692Q9BU19 519 aaPredicted RBP14.14□□□□□ -0.15
ACTC1-203ENST00000560563 ABCC8Q09428 1581 aa14.13□□□□□ -0.15
ACTC1-203ENST00000560563 WRNQ14191 1432 aaPredicted RBP eCLIP14.12□□□□□ -0.15
ACTC1-203ENST00000560563 MRC2Q9UBG0 1479 aa14.09□□□□□ -0.15
ACTC1-203ENST00000560563 CUX1P39880 1505 aa14.08□□□□□ -0.16
ACTC1-203ENST00000560563 URB2Q14146 1524 aaKnown RBP14.08□□□□□ -0.16
ACTC1-203ENST00000560563 TOPBP1Q92547 1522 aa14.05□□□□□ -0.16
ACTC1-203ENST00000560563 DNMBPQ6XZF7 1577 aa14.05□□□□□ -0.16
ACTC1-203ENST00000560563 TRIM41Q8WV44 630 aa14.05□□□□□ -0.16
ACTC1-203ENST00000560563 SYNJ1O43426 1573 aa14.05□□□□□ -0.16
ACTC1-203ENST00000560563 THOC2Q8NI27 1593 aaKnown RBP14.05□□□□□ -0.16
ACTC1-203ENST00000560563 PIP4P2Q8N4L2 257 aa14.04□□□□□ -0.16
ACTC1-203ENST00000560563 WDR62O43379 1518 aa14.04□□□□□ -0.16
ACTC1-203ENST00000560563 TOP2BQ02880 1626 aa14.03□□□□□ -0.16
ACTC1-203ENST00000560563 CLEC11AQ9Y240 323 aa14.02□□□□□ -0.17
ACTC1-203ENST00000560563 SSUH2Q9Y2M2 353 aa14.02□□□□□ -0.17
ACTC1-203ENST00000560563 BIVM-ERCC5R4GMW8 1640 aa14.01□□□□□ -0.17
ACTC1-203ENST00000560563 FGD5Q6ZNL6 1462 aa13.97□□□□□ -0.17
ACTC1-203ENST00000560563 POLA1P09884 1462 aaPredicted RBP13.96□□□□□ -0.17
ACTC1-203ENST00000560563 SPDYE1Q8NFV5 336 aaPredicted RBP13.96□□□□□ -0.17
ACTC1-203ENST00000560563 FXR2P51116 673 aaKnown RBP eCLIP13.94□□□□□ -0.18
ACTC1-203ENST00000560563 SOGA1O94964 1423 aa13.92□□□□□ -0.18
ACTC1-203ENST00000560563 CUX2O14529 1486 aa13.92□□□□□ -0.18
ACTC1-203ENST00000560563 RAD54L2Q9Y4B4 1467 aa13.9□□□□□ -0.18
ACTC1-203ENST00000560563 IFT140Q96RY7 1462 aa13.87□□□□□ -0.19
ACTC1-203ENST00000560563 ABCA10Q8WWZ4 1543 aa13.86□□□□□ -0.19
ACTC1-203ENST00000560563 TARBP1Q13395 1621 aaKnown RBP13.86□□□□□ -0.19
ACTC1-203ENST00000560563 HAX1O00165 279 aa13.82□□□□□ -0.2
ACTC1-203ENST00000560563 PRKAR2AP13861 404 aaKnown RBP13.81□□□□□ -0.2
ACTC1-203ENST00000560563 WDR97A6NE52 1622 aa13.81□□□□□ -0.2
ACTC1-203ENST00000560563 KIF27Q86VH2 1401 aa13.81□□□□□ -0.2
ACTC1-203ENST00000560563 TDRD9Q8NDG6 1382 aaKnown RBP13.8□□□□□ -0.2
ACTC1-203ENST00000560563 RUSC2Q8N2Y8 1516 aa13.8□□□□□ -0.2
ACTC1-203ENST00000560563 ZNF608Q9ULD9 1512 aaPredicted RBP13.79□□□□□ -0.2
ACTC1-203ENST00000560563 AQRO60306 1485 aaKnown RBP eCLIP13.77□□□□□ -0.21
ACTC1-203ENST00000560563 EEA1Q15075 1411 aa13.76□□□□□ -0.21
ACTC1-203ENST00000560563 PRR29P0C7W0 189 aa13.76□□□□□ -0.21
ACTC1-203ENST00000560563 ABCA5Q8WWZ7 1642 aa13.75□□□□□ -0.21
ACTC1-203ENST00000560563 GAPVD1Q14C86 1478 aa13.75□□□□□ -0.21
ACTC1-203ENST00000560563 FAM9AQ8IZU1 332 aaPredicted RBP13.74□□□□□ -0.21
ACTC1-203ENST00000560563 SPDYE4A6NLX3 237 aa13.73□□□□□ -0.21
ACTC1-203ENST00000560563 EIF4G3O43432 1585 aaKnown RBP13.72□□□□□ -0.21
ACTC1-203ENST00000560563 CHADLQ6NUI6 762 aa13.72□□□□□ -0.21
ACTC1-203ENST00000560563 IGF1RP08069 1367 aa13.71□□□□□ -0.21
ACTC1-203ENST00000560563 GRIN2BQ13224 1484 aa13.7□□□□□ -0.22
ACTC1-203ENST00000560563 SP7Q8TDD2 431 aaPredicted RBP13.7□□□□□ -0.22
ACTC1-203ENST00000560563 ERICH3Q5RHP9 1530 aa13.69□□□□□ -0.22
ACTC1-203ENST00000560563 PBRM1Q86U86 1689 aa13.66□□□□□ -0.22
ACTC1-203ENST00000560563 SNAPC4Q5SXM2 1469 aa13.64□□□□□ -0.23
ACTC1-203ENST00000560563 CARMIL1Q5VZK9 1371 aa13.64□□□□□ -0.23
ACTC1-203ENST00000560563 PRXQ9BXM0 1461 aa13.63□□□□□ -0.23
ACTC1-203ENST00000560563 MAGI1Q96QZ7 1491 aaPredicted RBP13.62□□□□□ -0.23
ACTC1-203ENST00000560563 EVX2Q03828 476 aa13.62□□□□□ -0.23
ACTC1-203ENST00000560563 CUL7Q14999 1698 aa13.61□□□□□ -0.23
ACTC1-203ENST00000560563 FHAD1B1AJZ9 1412 aa13.61□□□□□ -0.23
ACTC1-203ENST00000560563 ADAMTS12P58397 1594 aa13.59□□□□□ -0.23
ACTC1-203ENST00000560563 RAPGEF2Q9Y4G8 1499 aa13.58□□□□□ -0.24
ACTC1-203ENST00000560563 KIF21BO75037 1637 aa13.57□□□□□ -0.24
ACTC1-203ENST00000560563 SYNJ2O15056 1496 aa13.57□□□□□ -0.24
ACTC1-203ENST00000560563 CHMP7Q8WUX9 453 aaPredicted RBP13.56□□□□□ -0.24
ACTC1-203ENST00000560563 GOLGA3Q08378 1498 aa13.54□□□□□ -0.24
ACTC1-203ENST00000560563 LOC105371045A0A1W2PR82 267 aa13.53□□□□□ -0.24
ACTC1-203ENST00000560563 GRIN2AQ12879 1464 aa13.53□□□□□ -0.24
ACTC1-203ENST00000560563 STAG3Q9UJ98 1225 aa13.52□□□□□ -0.25
ACTC1-203ENST00000560563 C19orf67A6NJJ6 358 aa13.49□□□□□ -0.25
ACTC1-203ENST00000560563 UBTFP17480 764 aaKnown RBP13.49□□□□□ -0.25
ACTC1-203ENST00000560563 FARP1Q9Y4F1 1045 aaPredicted RBP13.47□□□□□ -0.25
ACTC1-203ENST00000560563 CHD1O14646 1710 aa13.46□□□□□ -0.25
ACTC1-203ENST00000560563 NUP160Q12769 1436 aa13.46□□□□□ -0.26
ACTC1-203ENST00000560563 TNIKQ9UKE5 1360 aa13.45□□□□□ -0.26
ACTC1-203ENST00000560563 CEP170Q5SW79 1584 aa13.44□□□□□ -0.26
ACTC1-203ENST00000560563 KIAA0586Q9BVV6 1533 aa13.41□□□□□ -0.26
ACTC1-203ENST00000560563 CREBZFQ9NS37 354 aa13.41□□□□□ -0.26
ACTC1-203ENST00000560563 CTTNBP2Q8WZ74 1663 aa13.38□□□□□ -0.27
ACTC1-203ENST00000560563 CD44P16070 742 aaKnown RBP13.37□□□□□ -0.27
ACTC1-203ENST00000560563 IQGAP2Q13576 1575 aa13.37□□□□□ -0.27
ACTC1-203ENST00000560563 CLASP1Q7Z460 1538 aa13.36□□□□□ -0.27
ACTC1-203ENST00000560563 JPH4Q96JJ6 628 aa13.35□□□□□ -0.27
ACTC1-203ENST00000560563 RANGAP1P46060 587 aaPredicted RBP13.33□□□□□ -0.28
ACTC1-203ENST00000560563 UGGT2Q9NYU1 1516 aa13.33□□□□□ -0.28
ACTC1-203ENST00000560563 CEP162Q5TB80 1403 aa13.32□□□□□ -0.28
ACTC1-203ENST00000560563 CLIP1P30622 1438 aa13.3□□□□□ -0.28
ACTC1-203ENST00000560563 GABBR2O75899 941 aa13.3□□□□□ -0.28
ACTC1-203ENST00000560563 PROM2Q8N271 834 aa13.3□□□□□ -0.28
ACTC1-203ENST00000560563 SHROOM2Q13796 1616 aa13.29□□□□□ -0.28
ACTC1-203ENST00000560563 ARHGAP35Q9NRY4 1499 aa13.28□□□□□ -0.28
ACTC1-203ENST00000560563 PRG4Q92954 1404 aaPredicted RBP13.27□□□□□ -0.29
ACTC1-203ENST00000560563 EFCAB5A4FU69 1503 aa13.27□□□□□ -0.29
ACTC1-203ENST00000560563 SAMD9Q5K651 1589 aa13.26□□□□□ -0.29
ACTC1-203ENST00000560563 DISP1Q96F81 1524 aa13.26□□□□□ -0.29
ACTC1-203ENST00000560563 CARMIL2Q6F5E8 1435 aa13.25□□□□□ -0.29
ACTC1-203ENST00000560563 P3H3Q8IVL6 736 aa13.25□□□□□ -0.29
ACTC1-203ENST00000560563 FKBP8Q14318 412 aa13.24□□□□□ -0.29
ACTC1-203ENST00000560563 KIAA0556O60303 1618 aa13.24□□□□□ -0.29
ACTC1-203ENST00000560563 ZRANB1Q9UGI0 708 aa13.23□□□□□ -0.29
ACTC1-203ENST00000560563 ARAP1Q96P48 1450 aa13.23□□□□□ -0.29
ACTC1-203ENST00000560563 FHOD3Q2V2M9 1422 aa13.22□□□□□ -0.29
ACTC1-203ENST00000560563 ERCC6L2Q5T890 1561 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms