RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 MAPKBP1O60336 1514 aa12.93□□□□□ -0.34
HERC1-208ENST00000560462 GRIN2BQ13224 1484 aa12.93□□□□□ -0.34
HERC1-208ENST00000560462 WDR97A6NE52 1622 aa12.93□□□□□ -0.34
HERC1-208ENST00000560462 NPM1P06748 294 aaKnown RBP eCLIP12.93□□□□□ -0.34
HERC1-208ENST00000560462 CEP170Q5SW79 1584 aa12.91□□□□□ -0.34
HERC1-208ENST00000560462 SOGA1O94964 1423 aa12.91□□□□□ -0.34
HERC1-208ENST00000560462 TSPOAP1O95153 1857 aa12.91□□□□□ -0.34
HERC1-208ENST00000560462 TOP2BQ02880 1626 aa12.86□□□□□ -0.35
HERC1-208ENST00000560462 CERKQ8TCT0 537 aa12.85□□□□□ -0.35
HERC1-208ENST00000560462 TOP2AP11388 1531 aaKnown RBP12.81□□□□□ -0.36
HERC1-208ENST00000560462 SHROOM2Q13796 1616 aa12.8□□□□□ -0.36
HERC1-208ENST00000560462 GRIN2AQ12879 1464 aa12.76□□□□□ -0.37
HERC1-208ENST00000560462 NUP160Q12769 1436 aa12.75□□□□□ -0.37
HERC1-208ENST00000560462 COL17A1Q9UMD9 1497 aaPredicted RBP12.75□□□□□ -0.37
HERC1-208ENST00000560462 PRG4Q92954 1404 aaPredicted RBP12.74□□□□□ -0.37
HERC1-208ENST00000560462 PBRM1Q86U86 1689 aa12.73□□□□□ -0.37
HERC1-208ENST00000560462 FGD5Q6ZNL6 1462 aa12.73□□□□□ -0.37
HERC1-208ENST00000560462 ADCY10Q96PN6 1610 aa12.73□□□□□ -0.37
HERC1-208ENST00000560462 PPRC1Q5VV67 1664 aaKnown RBP12.7□□□□□ -0.38
HERC1-208ENST00000560462 PCF11O94913 1555 aaKnown RBP12.69□□□□□ -0.38
HERC1-208ENST00000560462 CCDC88BA6NC98 1476 aa12.68□□□□□ -0.38
HERC1-208ENST00000560462 PTPRMP28827 1452 aa12.65□□□□□ -0.38
HERC1-208ENST00000560462 JPH4Q96JJ6 628 aa12.63□□□□□ -0.39
HERC1-208ENST00000560462 GLI2P10070 1586 aa12.62□□□□□ -0.39
HERC1-208ENST00000560462 TEX14Q8IWB6 1497 aa12.59□□□□□ -0.39
HERC1-208ENST00000560462 SLC4A1APQ9BWU0 796 aaKnown RBP12.59□□□□□ -0.39
HERC1-208ENST00000560462 ABCA5Q8WWZ7 1642 aa12.59□□□□□ -0.39
HERC1-208ENST00000560462 HSPA2P54652 639 aa12.58□□□□□ -0.4
HERC1-208ENST00000560462 ADAMTS12P58397 1594 aa12.58□□□□□ -0.4
HERC1-208ENST00000560462 CSRNP3Q8WYN3 585 aa12.58□□□□□ -0.4
HERC1-208ENST00000560462 MSH5O43196 834 aa12.56□□□□□ -0.4
HERC1-208ENST00000560462 PPP4R3CPQ6ZMV5 832 aa12.56□□□□□ -0.4
HERC1-208ENST00000560462 ASXL2Q76L83 1435 aa12.55□□□□□ -0.4
HERC1-208ENST00000560462 PLB1Q6P1J6 1458 aa12.55□□□□□ -0.4
HERC1-208ENST00000560462 PIAS4Q8N2W9 510 aaPredicted RBP12.55□□□□□ -0.4
HERC1-208ENST00000560462 KIF21BO75037 1637 aa12.55□□□□□ -0.4
HERC1-208ENST00000560462 CUX1P39880 1505 aa12.53□□□□□ -0.4
HERC1-208ENST00000560462 FHAD1B1AJZ9 1412 aa12.53□□□□□ -0.4
HERC1-208ENST00000560462 ABCA10Q8WWZ4 1543 aa12.52□□□□□ -0.41
HERC1-208ENST00000560462 MAP3K4Q9Y6R4 1608 aa12.51□□□□□ -0.41
HERC1-208ENST00000560462 ADAMTSL3P82987 1691 aa12.51□□□□□ -0.41
HERC1-208ENST00000560462 NCBP3Q53F19 620 aaKnown RBP12.49□□□□□ -0.41
HERC1-208ENST00000560462 ABCC2Q92887 1545 aa12.47□□□□□ -0.41
HERC1-208ENST00000560462 EPRSP07814 1512 aaKnown RBP12.46□□□□□ -0.42
HERC1-208ENST00000560462 KIAA0586Q9BVV6 1533 aa12.46□□□□□ -0.42
HERC1-208ENST00000560462 RUSC2Q8N2Y8 1516 aa12.43□□□□□ -0.42
HERC1-208ENST00000560462 MADDQ8WXG6 1647 aa12.4□□□□□ -0.42
HERC1-208ENST00000560462 PTPRGP23470 1445 aa12.4□□□□□ -0.42
HERC1-208ENST00000560462 DMRT2Q9Y5R5 561 aa12.39□□□□□ -0.43
HERC1-208ENST00000560462 MED1Q15648 1581 aaPredicted RBP12.38□□□□□ -0.43
HERC1-208ENST00000560462 TTBK1Q5TCY1 1321 aaPredicted RBP12.37□□□□□ -0.43
HERC1-208ENST00000560462 CUL7Q14999 1698 aa12.36□□□□□ -0.43
HERC1-208ENST00000560462 BCORL1Q5H9F3 1711 aa12.36□□□□□ -0.43
HERC1-208ENST00000560462 IQSEC2Q5JU85 1478 aa12.35□□□□□ -0.43
HERC1-208ENST00000560462 ARID4BQ4LE39 1312 aaPredicted RBP12.35□□□□□ -0.43
HERC1-208ENST00000560462 ERICH3Q5RHP9 1530 aa12.34□□□□□ -0.43
HERC1-208ENST00000560462 YEATS2Q9ULM3 1422 aa12.34□□□□□ -0.43
HERC1-208ENST00000560462 RIMS1Q86UR5 1692 aaKnown RBP12.32□□□□□ -0.44
HERC1-208ENST00000560462 MAGI3Q5TCQ9 1506 aa12.32□□□□□ -0.44
HERC1-208ENST00000560462 UHRF1BP1LA0JNW5 1464 aa12.31□□□□□ -0.44
HERC1-208ENST00000560462 CD109Q6YHK3 1445 aa12.29□□□□□ -0.44
HERC1-208ENST00000560462 WRNQ14191 1432 aaPredicted RBP eCLIP12.28□□□□□ -0.44
HERC1-208ENST00000560462 UBAP1LF5GYI3 381 aa12.27□□□□□ -0.45
HERC1-208ENST00000560462 TNIKQ9UKE5 1360 aa12.27□□□□□ -0.45
HERC1-208ENST00000560462 KDM5BQ9UGL1 1544 aa12.27□□□□□ -0.45
HERC1-208ENST00000560462 LTBP4Q8N2S1 1624 aa12.26□□□□□ -0.45
HERC1-208ENST00000560462 NPM3O75607 178 aaKnown RBP12.26□□□□□ -0.45
HERC1-208ENST00000560462 UACAQ9BZF9 1416 aa12.26□□□□□ -0.45
HERC1-208ENST00000560462 ARAP3Q8WWN8 1544 aa12.26□□□□□ -0.45
HERC1-208ENST00000560462 WDR7Q9Y4E6 1490 aa12.24□□□□□ -0.45
HERC1-208ENST00000560462 STRCQ7RTU9 1775 aa12.23□□□□□ -0.45
HERC1-208ENST00000560462 PTPRTO14522 1441 aa12.23□□□□□ -0.45
HERC1-208ENST00000560462 CFAP43Q8NDM7 1665 aa12.22□□□□□ -0.45
HERC1-208ENST00000560462 CARMIL2Q6F5E8 1435 aa12.21□□□□□ -0.45
HERC1-208ENST00000560462 ZCCHC11Q5TAX3 1644 aaKnown RBP12.21□□□□□ -0.46
HERC1-208ENST00000560462 HSPA1LP34931 641 aa12.19□□□□□ -0.46
HERC1-208ENST00000560462 PREX1Q8TCU6 1659 aa12.17□□□□□ -0.46
HERC1-208ENST00000560462 RAPGEF3O95398 923 aa12.17□□□□□ -0.46
HERC1-208ENST00000560462 KCNH8Q96L42 1107 aa12.16□□□□□ -0.46
HERC1-208ENST00000560462 POGZQ7Z3K3 1410 aa12.15□□□□□ -0.46
HERC1-208ENST00000560462 SCAF1Q9H7N4 1312 aaKnown RBP12.13□□□□□ -0.47
HERC1-208ENST00000560462 SRCAPQ6ZRS2 3230 aa12.13□□□□□ -0.47
HERC1-208ENST00000560462 PHLDB1Q86UU1 1377 aa12.13□□□□□ -0.47
HERC1-208ENST00000560462 TTC37Q6PGP7 1564 aa12.11□□□□□ -0.47
HERC1-208ENST00000560462 UHRF1BP1Q6BDS2 1440 aa12.11□□□□□ -0.47
HERC1-208ENST00000560462 FANCAO15360 1455 aa12.09□□□□□ -0.47
HERC1-208ENST00000560462 CNKSR2Q8WXI2 1034 aa12.09□□□□□ -0.47
HERC1-208ENST00000560462 ARHGEF40Q8TER5 1519 aa12.09□□□□□ -0.47
HERC1-208ENST00000560462 PIP4K2BP78356 416 aa12.08□□□□□ -0.48
HERC1-208ENST00000560462 FRMPD1Q5SYB0 1578 aa12.06□□□□□ -0.48
HERC1-208ENST00000560462 MLECQ14165 292 aa12.06□□□□□ -0.48
HERC1-208ENST00000560462 FER1L4A9Z1Z3 1794 aa12.05□□□□□ -0.48
HERC1-208ENST00000560462 RGS17Q9UGC6 210 aaPredicted RBP12.05□□□□□ -0.48
HERC1-208ENST00000560462 CEBPAP49715 358 aaPredicted RBP12.04□□□□□ -0.48
HERC1-208ENST00000560462 ZNF335Q9H4Z2 1342 aaPredicted RBP12.04□□□□□ -0.48
HERC1-208ENST00000560462 ZBTB22O15209 634 aa12.02□□□□□ -0.49
HERC1-208ENST00000560462 AKNAQ7Z591 1439 aa12.02□□□□□ -0.49
HERC1-208ENST00000560462 NEO1Q92859 1461 aa12.02□□□□□ -0.49
HERC1-208ENST00000560462 DISP1Q96F81 1524 aa12.01□□□□□ -0.49
HERC1-208ENST00000560462 TOM1O60784 492 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms