RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 CUX2O14529 1486 aa27.29■■□□□ 1.96
SEMA4B-215ENST00000560089 CCDC136Q96JN2 1154 aa27.29■■□□□ 1.96
SEMA4B-215ENST00000560089 RANGAP1P46060 587 aaPredicted RBP27.27■■□□□ 1.96
SEMA4B-215ENST00000560089 POLA1P09884 1462 aaPredicted RBP27.25■■□□□ 1.95
SEMA4B-215ENST00000560089 ITGAEP38570 1179 aa27.25■■□□□ 1.95
SEMA4B-215ENST00000560089 KIF27Q86VH2 1401 aa27.25■■□□□ 1.95
SEMA4B-215ENST00000560089 NEFLP07196 543 aa27.23■■□□□ 1.95
SEMA4B-215ENST00000560089 RAPGEF2Q9Y4G8 1499 aa27.22■■□□□ 1.95
SEMA4B-215ENST00000560089 GOLGA3Q08378 1498 aa27.19■■□□□ 1.94
SEMA4B-215ENST00000560089 ERCC6Q03468 1493 aa27.15■■□□□ 1.94
SEMA4B-215ENST00000560089 TNIKQ9UKE5 1360 aa27.1■■□□□ 1.93
SEMA4B-215ENST00000560089 CEP162Q5TB80 1403 aa27.1■■□□□ 1.93
SEMA4B-215ENST00000560089 TDRD9Q8NDG6 1382 aaKnown RBP27.1■■□□□ 1.93
SEMA4B-215ENST00000560089 KIF21BO75037 1637 aa27.09■■□□□ 1.93
SEMA4B-215ENST00000560089 IGF1RP08069 1367 aa27.08■■□□□ 1.93
SEMA4B-215ENST00000560089 MRC2Q9UBG0 1479 aa27.07■■□□□ 1.92
SEMA4B-215ENST00000560089 KCNH8Q96L42 1107 aa27.05■■□□□ 1.92
SEMA4B-215ENST00000560089 HNRNPUL2Q1KMD3 747 aaKnown RBP27.04■■□□□ 1.92
SEMA4B-215ENST00000560089 PRXQ9BXM0 1461 aa27.04■■□□□ 1.92
SEMA4B-215ENST00000560089 ABCA10Q8WWZ4 1543 aa27.02■■□□□ 1.92
SEMA4B-215ENST00000560089 ZBTB4Q9P1Z0 1013 aaPredicted RBP27■■□□□ 1.91
SEMA4B-215ENST00000560089 CDK11AQ9UQ88 783 aaPredicted RBP26.96■■□□□ 1.91
SEMA4B-215ENST00000560089 CARMIL1Q5VZK9 1371 aa26.95■■□□□ 1.91
SEMA4B-215ENST00000560089 NBR1Q14596 966 aa26.91■■□□□ 1.9
SEMA4B-215ENST00000560089 AQRO60306 1485 aaKnown RBP eCLIP26.88■■□□□ 1.891e-7■■■■■ 29.3
SEMA4B-215ENST00000560089 IL27Q8NEV9 243 aa26.88■■□□□ 1.89
SEMA4B-215ENST00000560089 ERICH3Q5RHP9 1530 aa26.87■■□□□ 1.89
SEMA4B-215ENST00000560089 WDR97A6NE52 1622 aa26.87■■□□□ 1.89
SEMA4B-215ENST00000560089 TARBP1Q13395 1621 aaKnown RBP26.87■■□□□ 1.89
SEMA4B-215ENST00000560089 CLIP1P30622 1438 aa26.87■■□□□ 1.89
SEMA4B-215ENST00000560089 RTN4Q9NQC3 1192 aaKnown RBP26.86■■□□□ 1.89
SEMA4B-215ENST00000560089 WDR62O43379 1518 aa26.86■■□□□ 1.89
SEMA4B-215ENST00000560089 GAPVD1Q14C86 1478 aa26.86■■□□□ 1.89
SEMA4B-215ENST00000560089 ZNF608Q9ULD9 1512 aaPredicted RBP26.83■■□□□ 1.89
SEMA4B-215ENST00000560089 THOC2Q8NI27 1593 aaKnown RBP26.82■■□□□ 1.88
SEMA4B-215ENST00000560089 EIF5BO60841 1220 aaKnown RBP26.81■■□□□ 1.88
SEMA4B-215ENST00000560089 ABCA5Q8WWZ7 1642 aa26.79■■□□□ 1.88
SEMA4B-215ENST00000560089 NOP58Q9Y2X3 529 aaKnown RBP26.75■■□□□ 1.87
SEMA4B-215ENST00000560089 IFT140Q96RY7 1462 aa26.7■■□□□ 1.87
SEMA4B-215ENST00000560089 PKNOX2Q96KN3 472 aa26.7■■□□□ 1.86
SEMA4B-215ENST00000560089 RTL5Q5HYW3 569 aaPredicted RBP26.68■■□□□ 1.86
SEMA4B-215ENST00000560089 P3H3Q8IVL6 736 aa26.68■■□□□ 1.86
SEMA4B-215ENST00000560089 SLC24A1O60721 1099 aa26.65■■□□□ 1.86
SEMA4B-215ENST00000560089 TRIM52Q96A61 297 aa26.65■■□□□ 1.86
SEMA4B-215ENST00000560089 CUL7Q14999 1698 aa26.64■■□□□ 1.85
SEMA4B-215ENST00000560089 PBRM1Q86U86 1689 aa26.61■■□□□ 1.85
SEMA4B-215ENST00000560089 PAK3O75914 559 aaPredicted RBP26.6■■□□□ 1.85
SEMA4B-215ENST00000560089 ARAP1Q96P48 1450 aa26.59■■□□□ 1.85
SEMA4B-215ENST00000560089 EIF4G3O43432 1585 aaKnown RBP26.57■■□□□ 1.84
SEMA4B-215ENST00000560089 GRIN2BQ13224 1484 aa26.57■■□□□ 1.84
SEMA4B-215ENST00000560089 ARHGAP35Q9NRY4 1499 aa26.56■■□□□ 1.84
SEMA4B-215ENST00000560089 VPS8Q8N3P4 1428 aa26.55■■□□□ 1.84
SEMA4B-215ENST00000560089 DHX57Q6P158 1386 aaKnown RBP26.55■■□□□ 1.84
SEMA4B-215ENST00000560089 FBLN2P98095 1184 aa26.55■■□□□ 1.84
SEMA4B-215ENST00000560089 SNAPC4Q5SXM2 1469 aa26.51■■□□□ 1.83
SEMA4B-215ENST00000560089 IRX6P78412 446 aaPredicted RBP26.51■■□□□ 1.83
SEMA4B-215ENST00000560089 FHAD1B1AJZ9 1412 aa26.49■■□□□ 1.83
SEMA4B-215ENST00000560089 ADAMTS12P58397 1594 aa26.47■■□□□ 1.83
SEMA4B-215ENST00000560089 DDX10Q13206 875 aaKnown RBP26.43■■□□□ 1.82
SEMA4B-215ENST00000560089 ATP1B4Q9UN42 357 aaPredicted RBP26.43■■□□□ 1.82
SEMA4B-215ENST00000560089 CTTNBP2Q8WZ74 1663 aa26.42■■□□□ 1.82
SEMA4B-215ENST00000560089 FHOD3Q2V2M9 1422 aa26.41■■□□□ 1.82
SEMA4B-215ENST00000560089 CHMP7Q8WUX9 453 aaPredicted RBP26.41■■□□□ 1.82
SEMA4B-215ENST00000560089 PLEKHG5O94827 1062 aa26.38■■□□□ 1.81
SEMA4B-215ENST00000560089 CCER2I3L3R5 266 aa26.37■■□□□ 1.81
SEMA4B-215ENST00000560089 PPP4R2Q9NY27 417 aa26.35■■□□□ 1.81
SEMA4B-215ENST00000560089 KANK4Q5T7N3 995 aaPredicted RBP26.33■■□□□ 1.8
SEMA4B-215ENST00000560089 GRIN2AQ12879 1464 aa26.29■■□□□ 1.8
SEMA4B-215ENST00000560089 C11orf95C9JLR9 678 aaPredicted RBP26.29■■□□□ 1.8
SEMA4B-215ENST00000560089 IPO9Q96P70 1041 aaKnown RBP26.28■■□□□ 1.8
SEMA4B-215ENST00000560089 ZBTB47Q9UFB7 747 aaPredicted RBP26.28■■□□□ 1.8
SEMA4B-215ENST00000560089 WASHC2AQ641Q2 1341 aa26.27■■□□□ 1.8
SEMA4B-215ENST00000560089 ANP32AP39687 249 aaKnown RBP26.27■■□□□ 1.8
SEMA4B-215ENST00000560089 MAGI1Q96QZ7 1491 aaPredicted RBP26.26■■□□□ 1.79
SEMA4B-215ENST00000560089 ANP32CO43423 234 aa26.25■■□□□ 1.79
SEMA4B-215ENST00000560089 SYNJ2O15056 1496 aa26.24■■□□□ 1.79
SEMA4B-215ENST00000560089 IQGAP2Q13576 1575 aa26.21■■□□□ 1.79
SEMA4B-215ENST00000560089 PPP1R15AO75807 674 aaPredicted RBP26.2■■□□□ 1.79
SEMA4B-215ENST00000560089 B4GALNT3Q6L9W6 998 aa26.19■■□□□ 1.78
SEMA4B-215ENST00000560089 PODXL2Q9NZ53 605 aa26.18■■□□□ 1.78
SEMA4B-215ENST00000560089 EFCAB5A4FU69 1503 aa26.18■■□□□ 1.78
SEMA4B-215ENST00000560089 ARID3CA6NKF2 412 aa26.17■■□□□ 1.78
SEMA4B-215ENST00000560089 PCF11O94913 1555 aaKnown RBP26.16■■□□□ 1.78
SEMA4B-215ENST00000560089 WASHC2CQ9Y4E1 1318 aa26.16■■□□□ 1.78
SEMA4B-215ENST00000560089 CEP170Q5SW79 1584 aa26.16■■□□□ 1.78
SEMA4B-215ENST00000560089 BRPF3Q9ULD4 1205 aa26.15■■□□□ 1.78
SEMA4B-215ENST00000560089 TIMELESSQ9UNS1 1208 aa26.15■■□□□ 1.78
SEMA4B-215ENST00000560089 HNRNPUQ00839 825 aaKnown RBP eCLIP26.14■■□□□ 1.77
SEMA4B-215ENST00000560089 SAMD9Q5K651 1589 aa26.13■■□□□ 1.77
SEMA4B-215ENST00000560089 DAXXQ9UER7 740 aaPredicted RBP26.13■■□□□ 1.77
SEMA4B-215ENST00000560089 GLIPR1L2Q4G1C9 344 aa26.12■■□□□ 1.77
SEMA4B-215ENST00000560089 KIAA0586Q9BVV6 1533 aa26.12■■□□□ 1.77
SEMA4B-215ENST00000560089 RSPH6AQ9H0K4 717 aa26.11■■□□□ 1.77
SEMA4B-215ENST00000560089 NEFMP07197 916 aa26.1■■□□□ 1.77
SEMA4B-215ENST00000560089 USP35Q9P2H5 1018 aa26.09■■□□□ 1.77
SEMA4B-215ENST00000560089 FMN1Q68DA7 1419 aa26.05■■□□□ 1.76
SEMA4B-215ENST00000560089 JPH4Q96JJ6 628 aa26.04■■□□□ 1.76
SEMA4B-215ENST00000560089 ZMYND15Q9H091 742 aa26.02■■□□□ 1.76
SEMA4B-215ENST00000560089 NUP160Q12769 1436 aa26.02■■□□□ 1.76
SEMA4B-215ENST00000560089 CASKIN1Q8WXD9 1431 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms