RNA–Protein interactions for RNA: ENST00000560033.5

PSMA4-217, Transcript of proteasome subunit alpha 4, humanhuman

TSL 4

Gene PSMA4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-217ENST00000560033 TSPYL2Q9H2G4 693 aaPredicted RBP13.76□□□□□ -0.21
PSMA4-217ENST00000560033 GABBR2O75899 941 aa13.75□□□□□ -0.21
PSMA4-217ENST00000560033 CLCN6P51797 869 aa13.74□□□□□ -0.21
PSMA4-217ENST00000560033 SPOCK2Q92563 424 aa13.74□□□□□ -0.21
PSMA4-217ENST00000560033 PHF12Q96QT6 1004 aa13.72□□□□□ -0.21
PSMA4-217ENST00000560033 FAM212AQ96EL1 285 aa13.69□□□□□ -0.22
PSMA4-217ENST00000560033 KIF12Q96FN5 646 aa13.66□□□□□ -0.22
PSMA4-217ENST00000560033 GSE1Q14687 1217 aa13.62□□□□□ -0.23
PSMA4-217ENST00000560033 DCAF8Q5TAQ9 597 aa13.62□□□□□ -0.23
PSMA4-217ENST00000560033 GALR2O43603 387 aaPredicted RBP13.61□□□□□ -0.23
PSMA4-217ENST00000560033 MAP3K13O43283 966 aa13.57□□□□□ -0.24
PSMA4-217ENST00000560033 MS4A3Q96HJ5 214 aa13.57□□□□□ -0.24
PSMA4-217ENST00000560033 SGIP1Q9BQI5 828 aa13.56□□□□□ -0.24
PSMA4-217ENST00000560033 CHRM1P11229 460 aaPredicted RBP13.55□□□□□ -0.24
PSMA4-217ENST00000560033 POTEIP0CG38 1075 aa13.53□□□□□ -0.24
PSMA4-217ENST00000560033 PYGBP11216 843 aa13.5□□□□□ -0.25
PSMA4-217ENST00000560033 CIZ1Q9ULV3 898 aaPredicted RBP13.48□□□□□ -0.25
PSMA4-217ENST00000560033 PCDHB13Q9Y5F0 798 aa13.46□□□□□ -0.25
PSMA4-217ENST00000560033 IFNL1Q8IU54 200 aa13.45□□□□□ -0.26
PSMA4-217ENST00000560033 TRPC6Q9Y210 931 aa13.45□□□□□ -0.26
PSMA4-217ENST00000560033 TRIM41Q8WV44 630 aa13.43□□□□□ -0.26
PSMA4-217ENST00000560033 ASTLQ6HA08 431 aaPredicted RBP13.41□□□□□ -0.26
PSMA4-217ENST00000560033 PKD2Q13563 968 aa13.4□□□□□ -0.26
PSMA4-217ENST00000560033 DCBLD2Q96PD2 775 aa13.39□□□□□ -0.27
PSMA4-217ENST00000560033 ATMINO43313 823 aaPredicted RBP13.38□□□□□ -0.27
PSMA4-217ENST00000560033 TIE1P35590 1138 aa13.38□□□□□ -0.27
PSMA4-217ENST00000560033 BMP2KQ9NSY1 1161 aaPredicted RBP13.37□□□□□ -0.27
PSMA4-217ENST00000560033 PCDHB8Q9UN66 801 aa13.36□□□□□ -0.27
PSMA4-217ENST00000560033 ZNF467Q7Z7K2 595 aaPredicted RBP13.35□□□□□ -0.27
PSMA4-217ENST00000560033 PELP1Q8IZL8 1130 aaKnown RBP13.34□□□□□ -0.27
PSMA4-217ENST00000560033 TTLL13PA6NNM8 815 aa13.32□□□□□ -0.28
PSMA4-217ENST00000560033 RNF25Q96BH1 459 aaPredicted RBP13.32□□□□□ -0.28
PSMA4-217ENST00000560033 ATN1P54259 1190 aaPredicted RBP13.31□□□□□ -0.28
PSMA4-217ENST00000560033 ZCCHC6Q5VYS8 1495 aaKnown RBP13.3□□□□□ -0.28
PSMA4-217ENST00000560033 TMEM106CQ9BVX2 250 aa13.24□□□□□ -0.29
PSMA4-217ENST00000560033 ECM2O94769 699 aaPredicted RBP13.23□□□□□ -0.29
PSMA4-217ENST00000560033 PSEN1P49768 467 aa13.22□□□□□ -0.29
PSMA4-217ENST00000560033 PDAP1Q13442 181 aaKnown RBP13.22□□□□□ -0.29
PSMA4-217ENST00000560033 RIOK3O14730 519 aaKnown RBP13.21□□□□□ -0.29
PSMA4-217ENST00000560033 TRIM35Q9UPQ4 493 aa13.2□□□□□ -0.3
PSMA4-217ENST00000560033 RGL2O15211 777 aa13.18□□□□□ -0.3
PSMA4-217ENST00000560033 SLC39A7Q92504 469 aa13.18□□□□□ -0.3
PSMA4-217ENST00000560033 C7P10643 843 aa13.17□□□□□ -0.3
PSMA4-217ENST00000560033 POTEFA5A3E0 1075 aa13.15□□□□□ -0.3
PSMA4-217ENST00000560033 DCAF8L2P0C7V8 631 aa13.15□□□□□ -0.3
PSMA4-217ENST00000560033 IER5LQ5T953 404 aa13.15□□□□□ -0.3
PSMA4-217ENST00000560033 VGFO15240 615 aaPredicted RBP13.14□□□□□ -0.31
PSMA4-217ENST00000560033 METRNQ9UJH8 293 aa13.14□□□□□ -0.31
PSMA4-217ENST00000560033 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.09□□□□□ -0.31
PSMA4-217ENST00000560033 ZFP91Q96JP5 570 aaPredicted RBP13.09□□□□□ -0.31
PSMA4-217ENST00000560033 DCAF1Q9Y4B6 1507 aa13.08□□□□□ -0.31
PSMA4-217ENST00000560033 POTEB2H3BUK9 544 aa13.08□□□□□ -0.32
PSMA4-217ENST00000560033 IRX5P78411 483 aaPredicted RBP13.08□□□□□ -0.32
PSMA4-217ENST00000560033 COLQQ9Y215 455 aaPredicted RBP13.07□□□□□ -0.32
PSMA4-217ENST00000560033 ABCC9O60706 1549 aa13.07□□□□□ -0.32
PSMA4-217ENST00000560033 LHX8Q68G74 356 aa13.06□□□□□ -0.32
PSMA4-217ENST00000560033 ILDR1Q86SU0 546 aaPredicted RBP13.06□□□□□ -0.32
PSMA4-217ENST00000560033 TAOK2Q9UL54 1235 aa13.04□□□□□ -0.32
PSMA4-217ENST00000560033 AMER1Q5JTC6 1135 aaPredicted RBP13.03□□□□□ -0.32
PSMA4-217ENST00000560033 CABP2Q9NPB3 220 aa13.02□□□□□ -0.33
PSMA4-217ENST00000560033 POTEJP0CG39 1038 aa13.01□□□□□ -0.33
PSMA4-217ENST00000560033 RTN4Q9NQC3 1192 aaKnown RBP13□□□□□ -0.33
PSMA4-217ENST00000560033 SHROOM4Q9ULL8 1493 aa12.98□□□□□ -0.33
PSMA4-217ENST00000560033 PDCD7Q8N8D1 485 aaKnown RBP12.98□□□□□ -0.33
PSMA4-217ENST00000560033 BCL11BQ9C0K0 894 aaPredicted RBP12.98□□□□□ -0.33
PSMA4-217ENST00000560033 MKRN3Q13064 507 aaKnown RBP12.97□□□□□ -0.33
PSMA4-217ENST00000560033 EFCAB3Q8N7B9 438 aa12.97□□□□□ -0.33
PSMA4-217ENST00000560033 OCEL1Q9H607 264 aa12.97□□□□□ -0.33
PSMA4-217ENST00000560033 GOLGA2Q08379 1002 aa12.95□□□□□ -0.34
PSMA4-217ENST00000560033 SEC24BO95487 1268 aa12.94□□□□□ -0.34
PSMA4-217ENST00000560033 STK25O00506 426 aa12.93□□□□□ -0.34
PSMA4-217ENST00000560033 PLCG2P16885 1265 aa12.93□□□□□ -0.34
PSMA4-217ENST00000560033 HS6ST3Q8IZP7 471 aa12.92□□□□□ -0.34
PSMA4-217ENST00000560033 STK24Q9Y6E0 443 aa12.92□□□□□ -0.34
PSMA4-217ENST00000560033 MYO15BQ96JP2 1530 aa12.92□□□□□ -0.34
PSMA4-217ENST00000560033 SOX12O15370 315 aa12.91□□□□□ -0.34
PSMA4-217ENST00000560033 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.91□□□□□ -0.34
PSMA4-217ENST00000560033 DNAJC5Q9H3Z4 198 aa12.9□□□□□ -0.34
PSMA4-217ENST00000560033 OTUD5Q96G74 571 aa12.89□□□□□ -0.35
PSMA4-217ENST00000560033 FBXO22Q8NEZ5 403 aa12.86□□□□□ -0.35
PSMA4-217ENST00000560033 MS4A4AQ96JQ5 239 aa12.86□□□□□ -0.35
PSMA4-217ENST00000560033 NACADO15069 1562 aa12.85□□□□□ -0.35
PSMA4-217ENST00000560033 DPY19L2Q6NUT2 758 aa12.84□□□□□ -0.35
PSMA4-217ENST00000560033 MFRPQ9BY79 579 aa12.84□□□□□ -0.35
PSMA4-217ENST00000560033 PHF8Q9UPP1 1060 aa12.84□□□□□ -0.35
PSMA4-217ENST00000560033 CHGAP10645 457 aaKnown RBP12.82□□□□□ -0.36
PSMA4-217ENST00000560033 MAMSTRQ6ZN01 415 aa12.81□□□□□ -0.36
PSMA4-217ENST00000560033 NLRP6P59044 892 aa12.78□□□□□ -0.36
PSMA4-217ENST00000560033 NKX1-1Q15270 411 aaPredicted RBP12.77□□□□□ -0.37
PSMA4-217ENST00000560033 L3MBTL3Q96JM7 780 aaPredicted RBP12.77□□□□□ -0.37
PSMA4-217ENST00000560033 TMEM121BQ9BXQ6 578 aaPredicted RBP12.77□□□□□ -0.37
PSMA4-217ENST00000560033 RB1CC1Q8TDY2 1594 aa12.74□□□□□ -0.37
PSMA4-217ENST00000560033 SCUBE2Q9NQ36 999 aa12.73□□□□□ -0.37
PSMA4-217ENST00000560033 BOLA1Q9Y3E2 137 aa12.72□□□□□ -0.37
PSMA4-217ENST00000560033 SCRIBQ14160 1630 aa12.7□□□□□ -0.38
PSMA4-217ENST00000560033 MICALL2Q8IY33 904 aa12.67□□□□□ -0.38
PSMA4-217ENST00000560033 PPP1R37O75864 691 aa12.64□□□□□ -0.39
PSMA4-217ENST00000560033 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.63□□□□□ -0.39
PSMA4-217ENST00000560033 GTPBP6O43824 516 aaPredicted RBP12.62□□□□□ -0.39
PSMA4-217ENST00000560033 SLAIN1Q8ND83 568 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms