RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 LOC105371045A0A1W2PR82 267 aa15.46■□□□□ 0.07
HERC1-206ENST00000559996 ADAMTS12P58397 1594 aa15.45■□□□□ 0.06
HERC1-206ENST00000559996 RAPGEF2Q9Y4G8 1499 aa15.45■□□□□ 0.06
HERC1-206ENST00000559996 CUL7Q14999 1698 aa15.44■□□□□ 0.06
HERC1-206ENST00000559996 HOXD11P31277 338 aaPredicted RBP15.44■□□□□ 0.06
HERC1-206ENST00000559996 CNKSR2Q8WXI2 1034 aa15.44■□□□□ 0.06
HERC1-206ENST00000559996 KIF21BO75037 1637 aa15.43■□□□□ 0.06
HERC1-206ENST00000559996 SYNJ2O15056 1496 aa15.42■□□□□ 0.06
HERC1-206ENST00000559996 CACNB1Q02641 598 aaPredicted RBP15.38■□□□□ 0.05
HERC1-206ENST00000559996 CHMP7Q8WUX9 453 aaPredicted RBP15.38■□□□□ 0.05
HERC1-206ENST00000559996 EHMT2Q96KQ7 1210 aa15.38■□□□□ 0.05
HERC1-206ENST00000559996 GRIN2AQ12879 1464 aa15.38■□□□□ 0.05
HERC1-206ENST00000559996 GOLGA3Q08378 1498 aa15.35■□□□□ 0.05
HERC1-206ENST00000559996 FBLN2P98095 1184 aa15.35■□□□□ 0.05
HERC1-206ENST00000559996 CHD1O14646 1710 aa15.34■□□□□ 0.05
HERC1-206ENST00000559996 NUP160Q12769 1436 aa15.33■□□□□ 0.04
HERC1-206ENST00000559996 RNF216Q9NWF9 866 aaPredicted RBP15.31■□□□□ 0.04
HERC1-206ENST00000559996 CEP170Q5SW79 1584 aa15.31■□□□□ 0.04
HERC1-206ENST00000559996 TNIKQ9UKE5 1360 aa15.3■□□□□ 0.04
HERC1-206ENST00000559996 UBTFP17480 764 aaKnown RBP15.29■□□□□ 0.04
HERC1-206ENST00000559996 KIAA0586Q9BVV6 1533 aa15.26■□□□□ 0.03
HERC1-206ENST00000559996 OSCARQ8IYS5 282 aa15.25■□□□□ 0.03
HERC1-206ENST00000559996 CLASP1Q7Z460 1538 aa15.22■□□□□ 0.03
HERC1-206ENST00000559996 CTTNBP2Q8WZ74 1663 aa15.21■□□□□ 0.03
HERC1-206ENST00000559996 JPH4Q96JJ6 628 aa15.2■□□□□ 0.02
HERC1-206ENST00000559996 IQGAP2Q13576 1575 aa15.18■□□□□ 0.02
HERC1-206ENST00000559996 RNF39Q9H2S5 420 aa15.17■□□□□ 0.02
HERC1-206ENST00000559996 UGGT2Q9NYU1 1516 aa15.16■□□□□ 0.02
HERC1-206ENST00000559996 SHROOM2Q13796 1616 aa15.15■□□□□ 0.02
HERC1-206ENST00000559996 CEP162Q5TB80 1403 aa15.14■□□□□ 0.01
HERC1-206ENST00000559996 DISP1Q96F81 1524 aa15.13■□□□□ 0.01
HERC1-206ENST00000559996 RANGAP1P46060 587 aaPredicted RBP15.13■□□□□ 0.01
HERC1-206ENST00000559996 ARHGAP35Q9NRY4 1499 aa15.13■□□□□ 0.01
HERC1-206ENST00000559996 CLIP1P30622 1438 aa15.1■□□□□ 0.01
HERC1-206ENST00000559996 SAMD9Q5K651 1589 aa15.1■□□□□ 0.01
HERC1-206ENST00000559996 ERCC6L2Q5T890 1561 aa15.1■□□□□ 0.01
HERC1-206ENST00000559996 PRG4Q92954 1404 aaPredicted RBP15.09■□□□□ 0.01
HERC1-206ENST00000559996 NCBP3Q53F19 620 aaKnown RBP15.08■□□□□ 0
HERC1-206ENST00000559996 P3H3Q8IVL6 736 aa15.08■□□□□ 0
HERC1-206ENST00000559996 ARAP1Q96P48 1450 aa15.07■□□□□ 0
HERC1-206ENST00000559996 KIAA0556O60303 1618 aa15.05■□□□□ -0
HERC1-206ENST00000559996 EFCAB5A4FU69 1503 aa15.04■□□□□ -0
HERC1-206ENST00000559996 FHOD3Q2V2M9 1422 aa15.03■□□□□ -0
HERC1-206ENST00000559996 CARMIL2Q6F5E8 1435 aa15.01□□□□□ -0.01
HERC1-206ENST00000559996 ARHGEF11O15085 1522 aa14.97□□□□□ -0.01
HERC1-206ENST00000559996 PTPRGP23470 1445 aa14.95□□□□□ -0.02
HERC1-206ENST00000559996 DNAJC5Q9H3Z4 198 aa14.94□□□□□ -0.02
HERC1-206ENST00000559996 VPS8Q8N3P4 1428 aa14.93□□□□□ -0.02
HERC1-206ENST00000559996 RIMBP3CA6NJZ7 1639 aa14.93□□□□□ -0.02
HERC1-206ENST00000559996 RIMBP3BA6NNM3 1639 aa14.93□□□□□ -0.02
HERC1-206ENST00000559996 RIMBP3Q9UFD9 1639 aa14.93□□□□□ -0.02
HERC1-206ENST00000559996 C1QBPQ07021 282 aaKnown RBP14.92□□□□□ -0.02
HERC1-206ENST00000559996 FMN1Q68DA7 1419 aa14.92□□□□□ -0.02
HERC1-206ENST00000559996 TTBK1Q5TCY1 1321 aaPredicted RBP14.92□□□□□ -0.02
HERC1-206ENST00000559996 PLB1Q6P1J6 1458 aa14.91□□□□□ -0.02
HERC1-206ENST00000559996 ABCA8O94911 1581 aa14.9□□□□□ -0.02
HERC1-206ENST00000559996 CASKIN1Q8WXD9 1431 aa14.89□□□□□ -0.03
HERC1-206ENST00000559996 NPM3O75607 178 aaKnown RBP14.88□□□□□ -0.03
HERC1-206ENST00000559996 UACAQ9BZF9 1416 aa14.87□□□□□ -0.03
HERC1-206ENST00000559996 PCF11O94913 1555 aaKnown RBP14.85□□□□□ -0.03
HERC1-206ENST00000559996 NUP153P49790 1475 aaKnown RBP14.85□□□□□ -0.03
HERC1-206ENST00000559996 RAPGEF6Q8TEU7 1601 aa14.84□□□□□ -0.03
HERC1-206ENST00000559996 UHRF1BP1LA0JNW5 1464 aa14.84□□□□□ -0.03
HERC1-206ENST00000559996 CYB5RLQ6IPT4 315 aa14.84□□□□□ -0.03
HERC1-206ENST00000559996 LRRIQ1Q96JM4 1722 aa14.83□□□□□ -0.03
HERC1-206ENST00000559996 FYCO1Q9BQS8 1478 aa14.82□□□□□ -0.04
HERC1-206ENST00000559996 ATP10BO94823 1461 aa14.82□□□□□ -0.04
HERC1-206ENST00000559996 ABCC2Q92887 1545 aa14.82□□□□□ -0.04
HERC1-206ENST00000559996 ADCY10Q96PN6 1610 aa14.81□□□□□ -0.04
HERC1-206ENST00000559996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.8□□□□□ -0.04
HERC1-206ENST00000559996 EPRSP07814 1512 aaKnown RBP14.79□□□□□ -0.04
HERC1-206ENST00000559996 KDM5BQ9UGL1 1544 aa14.78□□□□□ -0.04
HERC1-206ENST00000559996 KANK4Q5T7N3 995 aaPredicted RBP14.78□□□□□ -0.04
HERC1-206ENST00000559996 ATP1B4Q9UN42 357 aaPredicted RBP14.78□□□□□ -0.04
HERC1-206ENST00000559996 ARID3CA6NKF2 412 aa14.77□□□□□ -0.05
HERC1-206ENST00000559996 HECW1Q76N89 1606 aa14.77□□□□□ -0.05
HERC1-206ENST00000559996 MAP3K1Q13233 1512 aa14.76□□□□□ -0.05
HERC1-206ENST00000559996 CDK13Q14004 1512 aaKnown RBP14.76□□□□□ -0.05
HERC1-206ENST00000559996 MAGI3Q5TCQ9 1506 aa14.74□□□□□ -0.05
HERC1-206ENST00000559996 TIAM1Q13009 1591 aa14.73□□□□□ -0.05
HERC1-206ENST00000559996 CCDC18Q5T9S5 1454 aa14.72□□□□□ -0.05
HERC1-206ENST00000559996 ZCCHC11Q5TAX3 1644 aaKnown RBP14.71□□□□□ -0.05
HERC1-206ENST00000559996 PPARGC1BQ86YN6 1023 aaKnown RBP14.7□□□□□ -0.06
HERC1-206ENST00000559996 CFAP43Q8NDM7 1665 aa14.7□□□□□ -0.06
HERC1-206ENST00000559996 LRRC9Q6ZRR7 1453 aa14.69□□□□□ -0.06
HERC1-206ENST00000559996 PLEKHD1A6NEE1 506 aa14.66□□□□□ -0.06
HERC1-206ENST00000559996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.66□□□□□ -0.06
HERC1-206ENST00000559996 APLP2Q06481 763 aa14.66□□□□□ -0.06
HERC1-206ENST00000559996 HNRNPUL2Q1KMD3 747 aaKnown RBP14.66□□□□□ -0.06
HERC1-206ENST00000559996 TROQ12816 1431 aaPredicted RBP14.65□□□□□ -0.06
HERC1-206ENST00000559996 NPM1P06748 294 aaKnown RBP eCLIP14.64□□□□□ -0.07
HERC1-206ENST00000559996 ASXL2Q76L83 1435 aa14.64□□□□□ -0.07
HERC1-206ENST00000559996 CDK11AQ9UQ88 783 aaPredicted RBP14.63□□□□□ -0.07
HERC1-206ENST00000559996 MAPKBP1O60336 1514 aa14.62□□□□□ -0.07
HERC1-206ENST00000559996 MTUS2Q5JR59 1369 aa14.61□□□□□ -0.07
HERC1-206ENST00000559996 WDR7Q9Y4E6 1490 aa14.6□□□□□ -0.07
HERC1-206ENST00000559996 EHBP1L1Q8N3D4 1523 aa14.6□□□□□ -0.07
HERC1-206ENST00000559996 ABCC10Q5T3U5 1492 aa14.59□□□□□ -0.07
HERC1-206ENST00000559996 KCNH8Q96L42 1107 aa14.59□□□□□ -0.07
HERC1-206ENST00000559996 KIF14Q15058 1648 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 218.1 ms