RNA–Protein interactions for RNA: ENST00000559666.1

AC012291.1-201, humanhuman

TSL 5 BASIC

Gene AC012291.1, Length 429 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012291.1-201ENST00000559666 CUX2O14529 1486 aa13.8□□□□□ -0.2
AC012291.1-201ENST00000559666 PRR29P0C7W0 189 aa13.79□□□□□ -0.2
AC012291.1-201ENST00000559666 PROM2Q8N271 834 aa13.77□□□□□ -0.21
AC012291.1-201ENST00000559666 PRKAR2AP13861 404 aaKnown RBP13.75□□□□□ -0.21
AC012291.1-201ENST00000559666 FKBP8Q14318 412 aa13.75□□□□□ -0.21
AC012291.1-201ENST00000559666 KIF21AQ7Z4S6 1674 aa13.74□□□□□ -0.21
AC012291.1-201ENST00000559666 THOC2Q8NI27 1593 aaKnown RBP13.73□□□□□ -0.21
AC012291.1-201ENST00000559666 CADPSQ9ULU8 1353 aa13.72□□□□□ -0.21
AC012291.1-201ENST00000559666 STAG3Q9UJ98 1225 aa13.72□□□□□ -0.21
AC012291.1-201ENST00000559666 CCDC88BA6NC98 1476 aa13.71□□□□□ -0.21
AC012291.1-201ENST00000559666 CHADLQ6NUI6 762 aa13.69□□□□□ -0.22
AC012291.1-201ENST00000559666 SUPT5HO00267 1087 aaKnown RBP13.68□□□□□ -0.22
AC012291.1-201ENST00000559666 CFTRP13569 1480 aa13.67□□□□□ -0.22
AC012291.1-201ENST00000559666 PDS5BQ9NTI5 1447 aa13.66□□□□□ -0.22
AC012291.1-201ENST00000559666 PRDM2Q13029 1718 aa13.65□□□□□ -0.22
AC012291.1-201ENST00000559666 FANCD2Q9BXW9 1451 aa13.61□□□□□ -0.23
AC012291.1-201ENST00000559666 CEP164Q9UPV0 1460 aa13.59□□□□□ -0.23
AC012291.1-201ENST00000559666 MRC2Q9UBG0 1479 aa13.56□□□□□ -0.24
AC012291.1-201ENST00000559666 HAX1O00165 279 aa13.56□□□□□ -0.24
AC012291.1-201ENST00000559666 CREBZFQ9NS37 354 aa13.56□□□□□ -0.24
AC012291.1-201ENST00000559666 WDR62O43379 1518 aa13.55□□□□□ -0.24
AC012291.1-201ENST00000559666 FARP1Q9Y4F1 1045 aaPredicted RBP13.51□□□□□ -0.25
AC012291.1-201ENST00000559666 DNAJC5Q9H3Z4 198 aa13.5□□□□□ -0.25
AC012291.1-201ENST00000559666 URB2Q14146 1524 aaKnown RBP13.49□□□□□ -0.25
AC012291.1-201ENST00000559666 EVX2Q03828 476 aa13.45□□□□□ -0.26
AC012291.1-201ENST00000559666 C19orf67A6NJJ6 358 aa13.44□□□□□ -0.26
AC012291.1-201ENST00000559666 SP7Q8TDD2 431 aaPredicted RBP13.41□□□□□ -0.26
AC012291.1-201ENST00000559666 TOPBP1Q92547 1522 aa13.4□□□□□ -0.26
AC012291.1-201ENST00000559666 MNX1P50219 401 aaPredicted RBP13.39□□□□□ -0.27
AC012291.1-201ENST00000559666 DNMBPQ6XZF7 1577 aa13.39□□□□□ -0.27
AC012291.1-201ENST00000559666 ABCC8Q09428 1581 aa13.34□□□□□ -0.27
AC012291.1-201ENST00000559666 MIER1Q8N108 512 aa13.34□□□□□ -0.27
AC012291.1-201ENST00000559666 CD44P16070 742 aaKnown RBP13.33□□□□□ -0.28
AC012291.1-201ENST00000559666 CUX1P39880 1505 aa13.32□□□□□ -0.28
AC012291.1-201ENST00000559666 FBXO3Q9UK99 471 aa13.31□□□□□ -0.28
AC012291.1-201ENST00000559666 POLA1P09884 1462 aaPredicted RBP13.29□□□□□ -0.28
AC012291.1-201ENST00000559666 IFT140Q96RY7 1462 aa13.29□□□□□ -0.28
AC012291.1-201ENST00000559666 NPM1P06748 294 aaKnown RBP eCLIP13.28□□□□□ -0.28
AC012291.1-201ENST00000559666 PLCD3Q8N3E9 789 aa13.28□□□□□ -0.28
AC012291.1-201ENST00000559666 PLEKHG5O94827 1062 aa13.27□□□□□ -0.29
AC012291.1-201ENST00000559666 FGD5Q6ZNL6 1462 aa13.27□□□□□ -0.29
AC012291.1-201ENST00000559666 TARBP1Q13395 1621 aaKnown RBP13.27□□□□□ -0.29
AC012291.1-201ENST00000559666 ZNF608Q9ULD9 1512 aaPredicted RBP13.25□□□□□ -0.29
AC012291.1-201ENST00000559666 SYNJ1O43426 1573 aa13.24□□□□□ -0.29
AC012291.1-201ENST00000559666 RAD54L2Q9Y4B4 1467 aa13.23□□□□□ -0.29
AC012291.1-201ENST00000559666 BIVM-ERCC5R4GMW8 1640 aa13.23□□□□□ -0.29
AC012291.1-201ENST00000559666 EIF4G3O43432 1585 aaKnown RBP13.23□□□□□ -0.29
AC012291.1-201ENST00000559666 WRNQ14191 1432 aaPredicted RBP eCLIP13.22□□□□□ -0.29
AC012291.1-201ENST00000559666 WDR97A6NE52 1622 aa13.21□□□□□ -0.3
AC012291.1-201ENST00000559666 TOP2BQ02880 1626 aa13.21□□□□□ -0.3
AC012291.1-201ENST00000559666 ZRANB1Q9UGI0 708 aa13.2□□□□□ -0.3
AC012291.1-201ENST00000559666 SOGA1O94964 1423 aa13.2□□□□□ -0.3
AC012291.1-201ENST00000559666 VASPP50552 380 aaPredicted RBP13.18□□□□□ -0.3
AC012291.1-201ENST00000559666 AQRO60306 1485 aaKnown RBP eCLIP13.16□□□□□ -0.3
AC012291.1-201ENST00000559666 GABBR2O75899 941 aa13.15□□□□□ -0.3
AC012291.1-201ENST00000559666 PAK3O75914 559 aaPredicted RBP13.15□□□□□ -0.3
AC012291.1-201ENST00000559666 ZNF579Q8NAF0 562 aaKnown RBP13.14□□□□□ -0.31
AC012291.1-201ENST00000559666 ZBTB47Q9UFB7 747 aaPredicted RBP13.14□□□□□ -0.31
AC012291.1-201ENST00000559666 TDRD9Q8NDG6 1382 aaKnown RBP13.14□□□□□ -0.31
AC012291.1-201ENST00000559666 CHD1O14646 1710 aa13.12□□□□□ -0.31
AC012291.1-201ENST00000559666 ABCA10Q8WWZ4 1543 aa13.11□□□□□ -0.31
AC012291.1-201ENST00000559666 PBRM1Q86U86 1689 aa13.11□□□□□ -0.31
AC012291.1-201ENST00000559666 ABCA5Q8WWZ7 1642 aa13.1□□□□□ -0.31
AC012291.1-201ENST00000559666 RASEFQ8IZ41 740 aa13.09□□□□□ -0.31
AC012291.1-201ENST00000559666 TSPYL2Q9H2G4 693 aaPredicted RBP13.09□□□□□ -0.31
AC012291.1-201ENST00000559666 PHF12Q96QT6 1004 aa13.07□□□□□ -0.32
AC012291.1-201ENST00000559666 GAPVD1Q14C86 1478 aa13.06□□□□□ -0.32
AC012291.1-201ENST00000559666 SNAPC4Q5SXM2 1469 aa13.06□□□□□ -0.32
AC012291.1-201ENST00000559666 GRIN2BQ13224 1484 aa13.05□□□□□ -0.32
AC012291.1-201ENST00000559666 NUBP1P53384 320 aa13.05□□□□□ -0.32
AC012291.1-201ENST00000559666 CLCN6P51797 869 aa13.03□□□□□ -0.32
AC012291.1-201ENST00000559666 CCDC61Q9Y6R9 512 aa13.02□□□□□ -0.33
AC012291.1-201ENST00000559666 RIMBP3CA6NJZ7 1639 aa13.02□□□□□ -0.33
AC012291.1-201ENST00000559666 RIMBP3BA6NNM3 1639 aa13.02□□□□□ -0.33
AC012291.1-201ENST00000559666 RIMBP3Q9UFD9 1639 aa13.02□□□□□ -0.33
AC012291.1-201ENST00000559666 KLHL34Q8N239 644 aa13.01□□□□□ -0.33
AC012291.1-201ENST00000559666 MAGI1Q96QZ7 1491 aaPredicted RBP13.01□□□□□ -0.33
AC012291.1-201ENST00000559666 ADAMTS12P58397 1594 aa12.98□□□□□ -0.33
AC012291.1-201ENST00000559666 GALR2O43603 387 aaPredicted RBP12.98□□□□□ -0.33
AC012291.1-201ENST00000559666 IFNLR1Q8IU57 520 aaPredicted RBP12.98□□□□□ -0.33
AC012291.1-201ENST00000559666 SYNJ2O15056 1496 aa12.97□□□□□ -0.33
AC012291.1-201ENST00000559666 ERICH3Q5RHP9 1530 aa12.96□□□□□ -0.33
AC012291.1-201ENST00000559666 ARHGEF11O15085 1522 aa12.95□□□□□ -0.34
AC012291.1-201ENST00000559666 FAM212AQ96EL1 285 aa12.94□□□□□ -0.34
AC012291.1-201ENST00000559666 KIF27Q86VH2 1401 aa12.92□□□□□ -0.34
AC012291.1-201ENST00000559666 CHMP7Q8WUX9 453 aaPredicted RBP12.92□□□□□ -0.34
AC012291.1-201ENST00000559666 CLASP1Q7Z460 1538 aa12.92□□□□□ -0.34
AC012291.1-201ENST00000559666 TRIM41Q8WV44 630 aa12.91□□□□□ -0.34
AC012291.1-201ENST00000559666 MS4A3Q96HJ5 214 aa12.91□□□□□ -0.34
AC012291.1-201ENST00000559666 GRIN2AQ12879 1464 aa12.91□□□□□ -0.34
AC012291.1-201ENST00000559666 FHAD1B1AJZ9 1412 aa12.9□□□□□ -0.34
AC012291.1-201ENST00000559666 KIF12Q96FN5 646 aa12.9□□□□□ -0.34
AC012291.1-201ENST00000559666 POTEIP0CG38 1075 aa12.89□□□□□ -0.35
AC012291.1-201ENST00000559666 DCAF8Q5TAQ9 597 aa12.88□□□□□ -0.35
AC012291.1-201ENST00000559666 CUL7Q14999 1698 aa12.88□□□□□ -0.35
AC012291.1-201ENST00000559666 CEP170Q5SW79 1584 aa12.87□□□□□ -0.35
AC012291.1-201ENST00000559666 RUSC2Q8N2Y8 1516 aa12.87□□□□□ -0.35
AC012291.1-201ENST00000559666 MAP3K13O43283 966 aa12.86□□□□□ -0.35
AC012291.1-201ENST00000559666 SPOCK2Q92563 424 aa12.86□□□□□ -0.35
AC012291.1-201ENST00000559666 DCBLD2Q96PD2 775 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms