RNA–Protein interactions for RNA: ENST00000559642.1

BMP4-208, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-208ENST00000559642 PRG4Q92954 1404 aaPredicted RBP21.96■■□□□ 1.11
BMP4-208ENST00000559642 KIAA0586Q9BVV6 1533 aa21.95■■□□□ 1.1
BMP4-208ENST00000559642 JPH4Q96JJ6 628 aa21.92■■□□□ 1.1
BMP4-208ENST00000559642 RAPGEF2Q9Y4G8 1499 aa21.9■■□□□ 1.1
BMP4-208ENST00000559642 IQGAP2Q13576 1575 aa21.86■■□□□ 1.09
BMP4-208ENST00000559642 CTTNBP2Q8WZ74 1663 aa21.79■■□□□ 1.08
BMP4-208ENST00000559642 PRXQ9BXM0 1461 aa21.79■■□□□ 1.08
BMP4-208ENST00000559642 TRHP20396 242 aaPredicted RBP21.75■■□□□ 1.07
BMP4-208ENST00000559642 UGGT2Q9NYU1 1516 aa21.71■■□□□ 1.07
BMP4-208ENST00000559642 ADCY10Q96PN6 1610 aa21.71■■□□□ 1.07
BMP4-208ENST00000559642 DISP1Q96F81 1524 aa21.7■■□□□ 1.07
BMP4-208ENST00000559642 CARMIL2Q6F5E8 1435 aa21.7■■□□□ 1.06
BMP4-208ENST00000559642 CHIC1Q5VXU3 224 aa21.69■■□□□ 1.06
BMP4-208ENST00000559642 EEA1Q15075 1411 aa21.69■■□□□ 1.06
BMP4-208ENST00000559642 KIAA0556O60303 1618 aa21.68■■□□□ 1.06
BMP4-208ENST00000559642 CSRNP3Q8WYN3 585 aa21.67■■□□□ 1.06
BMP4-208ENST00000559642 TTBK1Q5TCY1 1321 aaPredicted RBP21.66■■□□□ 1.06
BMP4-208ENST00000559642 TNIKQ9UKE5 1360 aa21.65■■□□□ 1.06
BMP4-208ENST00000559642 PTPRGP23470 1445 aa21.64■■□□□ 1.06
BMP4-208ENST00000559642 FAM9AQ8IZU1 332 aaPredicted RBP21.64■■□□□ 1.05
BMP4-208ENST00000559642 KIF13AQ9H1H9 1805 aa21.57■■□□□ 1.04
BMP4-208ENST00000559642 KIF21BO75037 1637 aa21.56■■□□□ 1.04
BMP4-208ENST00000559642 MAPKBP1O60336 1514 aa21.55■■□□□ 1.04
BMP4-208ENST00000559642 GOLGA3Q08378 1498 aa21.54■■□□□ 1.04
BMP4-208ENST00000559642 ABCC2Q92887 1545 aa21.52■■□□□ 1.04
BMP4-208ENST00000559642 NPM1P06748 294 aaKnown RBP eCLIP21.52■■□□□ 1.04
BMP4-208ENST00000559642 UACAQ9BZF9 1416 aa21.51■■□□□ 1.03
BMP4-208ENST00000559642 UHRF1BP1LA0JNW5 1464 aa21.5■■□□□ 1.03
BMP4-208ENST00000559642 DIP2BQ9P265 1576 aa21.48■■□□□ 1.03
BMP4-208ENST00000559642 SAMD9Q5K651 1589 aa21.47■■□□□ 1.03
BMP4-208ENST00000559642 ABCC10Q5T3U5 1492 aa21.45■■□□□ 1.03
BMP4-208ENST00000559642 PLB1Q6P1J6 1458 aa21.45■■□□□ 1.03
BMP4-208ENST00000559642 ZCCHC11Q5TAX3 1644 aaKnown RBP21.44■■□□□ 1.02
BMP4-208ENST00000559642 ABCA8O94911 1581 aa21.43■■□□□ 1.02
BMP4-208ENST00000559642 EHMT2Q96KQ7 1210 aa21.42■■□□□ 1.02
BMP4-208ENST00000559642 KDM5BQ9UGL1 1544 aa21.41■■□□□ 1.02
BMP4-208ENST00000559642 P3H3Q8IVL6 736 aa21.41■■□□□ 1.02
BMP4-208ENST00000559642 ASXL2Q76L83 1435 aa21.39■■□□□ 1.02
BMP4-208ENST00000559642 RANGAP1P46060 587 aaPredicted RBP21.39■■□□□ 1.01
BMP4-208ENST00000559642 FAM69CQ0P6D2 419 aa21.39■■□□□ 1.01
BMP4-208ENST00000559642 TSPOAP1O95153 1857 aa21.34■■□□□ 1.01
BMP4-208ENST00000559642 FHOD3Q2V2M9 1422 aa21.33■■□□□ 1.01
BMP4-208ENST00000559642 EFCAB5A4FU69 1503 aa21.32■■□□□ 1
BMP4-208ENST00000559642 RAPGEF6Q8TEU7 1601 aa21.3■■□□□ 1
BMP4-208ENST00000559642 UBTFP17480 764 aaKnown RBP21.3■■□□□ 1
BMP4-208ENST00000559642 GLI2P10070 1586 aa21.28■■□□□ 1
BMP4-208ENST00000559642 EPRSP07814 1512 aaKnown RBP21.27■■□□□ 1
BMP4-208ENST00000559642 WDR7Q9Y4E6 1490 aa21.26■□□□□ 0.99
BMP4-208ENST00000559642 ARID3CA6NKF2 412 aa21.25■□□□□ 0.99
BMP4-208ENST00000559642 PPRC1Q5VV67 1664 aaKnown RBP21.24■□□□□ 0.99
BMP4-208ENST00000559642 MAP3K4Q9Y6R4 1608 aa21.22■□□□□ 0.99
BMP4-208ENST00000559642 ATP10BO94823 1461 aa21.2■□□□□ 0.98
BMP4-208ENST00000559642 NUP153P49790 1475 aaKnown RBP21.2■□□□□ 0.98
BMP4-208ENST00000559642 ARHGAP35Q9NRY4 1499 aa21.2■□□□□ 0.98
BMP4-208ENST00000559642 KDM6BO15054 1643 aa21.18■□□□□ 0.98
BMP4-208ENST00000559642 CFAP43Q8NDM7 1665 aa21.13■□□□□ 0.97
BMP4-208ENST00000559642 KCNH8Q96L42 1107 aa21.11■□□□□ 0.97
BMP4-208ENST00000559642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.08■□□□□ 0.97
BMP4-208ENST00000559642 HNRNPUL2Q1KMD3 747 aaKnown RBP21.08■□□□□ 0.97
BMP4-208ENST00000559642 HECW1Q76N89 1606 aa21.07■□□□□ 0.96
BMP4-208ENST00000559642 TEX14Q8IWB6 1497 aa21.07■□□□□ 0.96
BMP4-208ENST00000559642 FMN1Q68DA7 1419 aa21.07■□□□□ 0.96
BMP4-208ENST00000559642 CDK13Q14004 1512 aaKnown RBP21.07■□□□□ 0.96
BMP4-208ENST00000559642 CD109Q6YHK3 1445 aa21.05■□□□□ 0.96
BMP4-208ENST00000559642 ABCA9Q8IUA7 1624 aa21.05■□□□□ 0.96
BMP4-208ENST00000559642 MAGI3Q5TCQ9 1506 aa21.03■□□□□ 0.96
BMP4-208ENST00000559642 PCF11O94913 1555 aaKnown RBP21.02■□□□□ 0.95
BMP4-208ENST00000559642 LRRIQ1Q96JM4 1722 aa21.01■□□□□ 0.95
BMP4-208ENST00000559642 COL17A1Q9UMD9 1497 aaPredicted RBP21.01■□□□□ 0.95
BMP4-208ENST00000559642 CLIP1P30622 1438 aa20.99■□□□□ 0.95
BMP4-208ENST00000559642 ATP1B4Q9UN42 357 aaPredicted RBP20.98■□□□□ 0.95
BMP4-208ENST00000559642 TTC37Q6PGP7 1564 aa20.94■□□□□ 0.94
BMP4-208ENST00000559642 PLEKHD1A6NEE1 506 aa20.94■□□□□ 0.94
BMP4-208ENST00000559642 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.93■□□□□ 0.94
BMP4-208ENST00000559642 CASKIN1Q8WXD9 1431 aa20.91■□□□□ 0.94
BMP4-208ENST00000559642 CEP162Q5TB80 1403 aa20.88■□□□□ 0.93
BMP4-208ENST00000559642 KIF14Q15058 1648 aa20.88■□□□□ 0.93
BMP4-208ENST00000559642 FYCO1Q9BQS8 1478 aa20.88■□□□□ 0.93
BMP4-208ENST00000559642 CCDC18Q5T9S5 1454 aa20.85■□□□□ 0.93
BMP4-208ENST00000559642 ARAP3Q8WWN8 1544 aa20.84■□□□□ 0.93
BMP4-208ENST00000559642 NEO1Q92859 1461 aa20.84■□□□□ 0.93
BMP4-208ENST00000559642 TROQ12816 1431 aaPredicted RBP20.83■□□□□ 0.93
BMP4-208ENST00000559642 CFAP74Q9C0B2 1584 aa20.82■□□□□ 0.92
BMP4-208ENST00000559642 LOC105371045A0A1W2PR82 267 aa20.82■□□□□ 0.92
BMP4-208ENST00000559642 MYO5CQ9NQX4 1742 aa20.81■□□□□ 0.92
BMP4-208ENST00000559642 FRMPD1Q5SYB0 1578 aa20.8■□□□□ 0.92
BMP4-208ENST00000559642 CDK11AQ9UQ88 783 aaPredicted RBP20.8■□□□□ 0.92
BMP4-208ENST00000559642 FANCAO15360 1455 aa20.8■□□□□ 0.92
BMP4-208ENST00000559642 PHLDB1Q86UU1 1377 aa20.78■□□□□ 0.92
BMP4-208ENST00000559642 AKNAQ7Z591 1439 aa20.75■□□□□ 0.91
BMP4-208ENST00000559642 RICTORQ6R327 1708 aa20.75■□□□□ 0.91
BMP4-208ENST00000559642 PLCH2O75038 1416 aa20.74■□□□□ 0.91
BMP4-208ENST00000559642 AEBP2Q6ZN18 517 aaPredicted RBP20.74■□□□□ 0.91
BMP4-208ENST00000559642 RAPGEF3O95398 923 aa20.73■□□□□ 0.91
BMP4-208ENST00000559642 DENND4BO75064 1496 aaPredicted RBP20.7■□□□□ 0.9
BMP4-208ENST00000559642 ADGRL1O94910 1474 aa20.7■□□□□ 0.9
BMP4-208ENST00000559642 ARHGAP5Q13017 1502 aa20.7■□□□□ 0.9
BMP4-208ENST00000559642 PREX2Q70Z35 1606 aa20.7■□□□□ 0.9
BMP4-208ENST00000559642 CDC42BPBQ9Y5S2 1711 aa20.7■□□□□ 0.9
BMP4-208ENST00000559642 KDM4FA0A1W2PPD8 638 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms