RNA–Protein interactions for RNA: ENST00000559499.1

PCSK6-210, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 2

Gene PCSK6, Length 3,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-210ENST00000559499 GAPVD1Q14C86 1478 aa23.11■■□□□ 1.29
PCSK6-210ENST00000559499 ERCC6Q03468 1493 aa23.1■■□□□ 1.29
PCSK6-210ENST00000559499 ZNF608Q9ULD9 1512 aaPredicted RBP22.96■■□□□ 1.27
PCSK6-210ENST00000559499 MRC2Q9UBG0 1479 aa22.93■■□□□ 1.26
PCSK6-210ENST00000559499 CCNB3Q8WWL7 1395 aa22.91■■□□□ 1.26
PCSK6-210ENST00000559499 CHMP7Q8WUX9 453 aaPredicted RBP22.87■■□□□ 1.25
PCSK6-210ENST00000559499 FHAD1B1AJZ9 1412 aa22.87■■□□□ 1.25
PCSK6-210ENST00000559499 PHLDB1Q86UU1 1377 aa22.86■■□□□ 1.25
PCSK6-210ENST00000559499 PCF11O94913 1555 aaKnown RBP22.83■■□□□ 1.24
PCSK6-210ENST00000559499 MTUS2Q5JR59 1369 aa22.83■■□□□ 1.24
PCSK6-210ENST00000559499 ABCA5Q8WWZ7 1642 aa22.8■■□□□ 1.24
PCSK6-210ENST00000559499 CUL7Q14999 1698 aa22.8■■□□□ 1.24
PCSK6-210ENST00000559499 DIEXFQ68CQ4 756 aaKnown RBP22.8■■□□□ 1.24
PCSK6-210ENST00000559499 LRRC9Q6ZRR7 1453 aa22.79■■□□□ 1.24
PCSK6-210ENST00000559499 TARBP1Q13395 1621 aaKnown RBP22.79■■□□□ 1.24
PCSK6-210ENST00000559499 TIAM1Q13009 1591 aa22.78■■□□□ 1.24
PCSK6-210ENST00000559499 NEUROD1Q13562 356 aa22.76■■□□□ 1.23
PCSK6-210ENST00000559499 WDR97A6NE52 1622 aa22.75■■□□□ 1.23
PCSK6-210ENST00000559499 CHIC2Q9UKJ5 165 aa22.74■■□□□ 1.23
PCSK6-210ENST00000559499 GRIN2BQ13224 1484 aa22.73■■□□□ 1.23
PCSK6-210ENST00000559499 FMN1Q68DA7 1419 aa22.72■■□□□ 1.23
PCSK6-210ENST00000559499 RRBP1Q9P2E9 1410 aaKnown RBP22.71■■□□□ 1.23
PCSK6-210ENST00000559499 SNAPC4Q5SXM2 1469 aa22.71■■□□□ 1.23
PCSK6-210ENST00000559499 DHX57Q6P158 1386 aaKnown RBP22.69■■□□□ 1.22
PCSK6-210ENST00000559499 CASKIN1Q8WXD9 1431 aa22.69■■□□□ 1.22
PCSK6-210ENST00000559499 CTTNBP2Q8WZ74 1663 aa22.68■■□□□ 1.22
PCSK6-210ENST00000559499 IFT140Q96RY7 1462 aa22.68■■□□□ 1.22
PCSK6-210ENST00000559499 ZNF316A6NFI3 1004 aaPredicted RBP22.68■■□□□ 1.22
PCSK6-210ENST00000559499 RAB3GAP2Q9H2M9 1393 aa22.67■■□□□ 1.22
PCSK6-210ENST00000559499 EFCAB5A4FU69 1503 aa22.63■■□□□ 1.21
PCSK6-210ENST00000559499 SIN3AQ96ST3 1273 aa22.63■■□□□ 1.21
PCSK6-210ENST00000559499 FYCO1Q9BQS8 1478 aa22.63■■□□□ 1.21
PCSK6-210ENST00000559499 PBRM1Q86U86 1689 aa22.62■■□□□ 1.21
PCSK6-210ENST00000559499 YTHDC1Q96MU7 727 aaKnown RBP22.61■■□□□ 1.21
PCSK6-210ENST00000559499 RRP7BPQ9NSQ0 103 aa22.61■■□□□ 1.21
PCSK6-210ENST00000559499 WDR62O43379 1518 aa22.6■■□□□ 1.21
PCSK6-210ENST00000559499 ADAMTS12P58397 1594 aa22.56■■□□□ 1.2
PCSK6-210ENST00000559499 ZNF777Q9ULD5 760 aaPredicted RBP22.56■■□□□ 1.2
PCSK6-210ENST00000559499 IQGAP2Q13576 1575 aa22.55■■□□□ 1.2
PCSK6-210ENST00000559499 EIF4G3O43432 1585 aaKnown RBP22.54■■□□□ 1.2
PCSK6-210ENST00000559499 CDK13Q14004 1512 aaKnown RBP22.54■■□□□ 1.2
PCSK6-210ENST00000559499 JPH4Q96JJ6 628 aa22.54■■□□□ 1.2
PCSK6-210ENST00000559499 SETD5Q9C0A6 1442 aa22.52■■□□□ 1.2
PCSK6-210ENST00000559499 TRIM52Q96A61 297 aa22.5■■□□□ 1.19
PCSK6-210ENST00000559499 GRIN2AQ12879 1464 aa22.49■■□□□ 1.19
PCSK6-210ENST00000559499 NCOA2Q15596 1464 aa22.49■■□□□ 1.19
PCSK6-210ENST00000559499 HIRIP3Q9BW71 556 aaPredicted RBP22.48■■□□□ 1.19
PCSK6-210ENST00000559499 FGD6Q6ZV73 1430 aa22.48■■□□□ 1.19
PCSK6-210ENST00000559499 MAP3K1Q13233 1512 aa22.47■■□□□ 1.19
PCSK6-210ENST00000559499 PELP1Q8IZL8 1130 aaKnown RBP22.47■■□□□ 1.19
PCSK6-210ENST00000559499 SAMD9Q5K651 1589 aa22.47■■□□□ 1.19
PCSK6-210ENST00000559499 ZNF644Q9H582 1327 aaPredicted RBP22.46■■□□□ 1.19
PCSK6-210ENST00000559499 CFAP43Q8NDM7 1665 aa22.45■■□□□ 1.18
PCSK6-210ENST00000559499 THOC2Q8NI27 1593 aaKnown RBP22.43■■□□□ 1.18
PCSK6-210ENST00000559499 MIER1Q8N108 512 aa22.42■■□□□ 1.18
PCSK6-210ENST00000559499 KIAA0586Q9BVV6 1533 aa22.42■■□□□ 1.18
PCSK6-210ENST00000559499 PTPRKQ15262 1439 aa22.4■■□□□ 1.18
PCSK6-210ENST00000559499 MAGI3Q5TCQ9 1506 aa22.4■■□□□ 1.18
PCSK6-210ENST00000559499 EPRSP07814 1512 aaKnown RBP22.4■■□□□ 1.18
PCSK6-210ENST00000559499 PLB1Q6P1J6 1458 aa22.38■■□□□ 1.17
PCSK6-210ENST00000559499 LRRIQ1Q96JM4 1722 aa22.38■■□□□ 1.17
PCSK6-210ENST00000559499 MYOM3Q5VTT5 1437 aa22.37■■□□□ 1.17
PCSK6-210ENST00000559499 FOXD1Q16676 465 aa22.37■■□□□ 1.17
PCSK6-210ENST00000559499 CDK11AQ9UQ88 783 aaPredicted RBP22.37■■□□□ 1.17
PCSK6-210ENST00000559499 SYNJ2O15056 1496 aa22.36■■□□□ 1.17
PCSK6-210ENST00000559499 DISP1Q96F81 1524 aa22.36■■□□□ 1.17
PCSK6-210ENST00000559499 PRG4Q92954 1404 aaPredicted RBP22.32■■□□□ 1.16
PCSK6-210ENST00000559499 MAGI1Q96QZ7 1491 aaPredicted RBP22.32■■□□□ 1.16
PCSK6-210ENST00000559499 CLSPNQ9HAW4 1339 aa22.31■■□□□ 1.16
PCSK6-210ENST00000559499 CEP170Q5SW79 1584 aa22.31■■□□□ 1.16
PCSK6-210ENST00000559499 CFDP1Q9UEE9 299 aaPredicted RBP22.31■■□□□ 1.16
PCSK6-210ENST00000559499 HECW1Q76N89 1606 aa22.28■■□□□ 1.16
PCSK6-210ENST00000559499 CARMIL2Q6F5E8 1435 aa22.27■■□□□ 1.16
PCSK6-210ENST00000559499 UGGT2Q9NYU1 1516 aa22.27■■□□□ 1.16
PCSK6-210ENST00000559499 CCDC18Q5T9S5 1454 aa22.27■■□□□ 1.16
PCSK6-210ENST00000559499 EHBP1L1Q8N3D4 1523 aa22.27■■□□□ 1.15
PCSK6-210ENST00000559499 KIAA0556O60303 1618 aa22.26■■□□□ 1.15
PCSK6-210ENST00000559499 PLEKHD1A6NEE1 506 aa22.26■■□□□ 1.15
PCSK6-210ENST00000559499 SUPT6HQ7KZ85 1726 aaKnown RBP22.25■■□□□ 1.15
PCSK6-210ENST00000559499 NUP153P49790 1475 aaKnown RBP22.25■■□□□ 1.15
PCSK6-210ENST00000559499 KCNH8Q96L42 1107 aa22.25■■□□□ 1.15
PCSK6-210ENST00000559499 MAPKBP1O60336 1514 aa22.24■■□□□ 1.15
PCSK6-210ENST00000559499 PTPN23Q9H3S7 1636 aa22.19■■□□□ 1.14
PCSK6-210ENST00000559499 TONSLQ96HA7 1378 aa22.18■■□□□ 1.14
PCSK6-210ENST00000559499 NAIPQ13075 1403 aa22.18■■□□□ 1.14
PCSK6-210ENST00000559499 PTPRGP23470 1445 aa22.16■■□□□ 1.14
PCSK6-210ENST00000559499 DDX10Q13206 875 aaKnown RBP22.16■■□□□ 1.14
PCSK6-210ENST00000559499 NUP160Q12769 1436 aa22.14■■□□□ 1.13
PCSK6-210ENST00000559499 SCAF1Q9H7N4 1312 aaKnown RBP22.14■■□□□ 1.13
PCSK6-210ENST00000559499 HFM1A2PYH4 1435 aa22.13■■□□□ 1.13
PCSK6-210ENST00000559499 RAPGEF6Q8TEU7 1601 aa22.13■■□□□ 1.13
PCSK6-210ENST00000559499 HNRNPMP52272 730 aaKnown RBP eCLIP22.11■■□□□ 1.13
PCSK6-210ENST00000559499 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.11■■□□□ 1.13
PCSK6-210ENST00000559499 CENPBP07199 599 aaPredicted RBP22.11■■□□□ 1.13
PCSK6-210ENST00000559499 SLC4A1APQ9BWU0 796 aaKnown RBP22.1■■□□□ 1.13
PCSK6-210ENST00000559499 MPHOSPH9Q99550 1183 aa22.09■■□□□ 1.13
PCSK6-210ENST00000559499 ZNF326Q5BKZ1 582 aaKnown RBP22.08■■□□□ 1.13
PCSK6-210ENST00000559499 ACIN1Q9UKV3 1341 aaKnown RBP22.07■■□□□ 1.12
PCSK6-210ENST00000559499 PPP1R15AO75807 674 aaPredicted RBP22.07■■□□□ 1.12
PCSK6-210ENST00000559499 TROQ12816 1431 aaPredicted RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms