RNA–Protein interactions for RNA: ENST00000558999.5

AP3S2-208, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 5

Gene AP3S2, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-208ENST00000558999 MAPKBP1O60336 1514 aa14.29□□□□□ -0.12
AP3S2-208ENST00000558999 ERICH3Q5RHP9 1530 aa14.29□□□□□ -0.12
AP3S2-208ENST00000558999 KDM4FA0A1W2PPD8 638 aa14.28□□□□□ -0.12
AP3S2-208ENST00000558999 ILDR1Q86SU0 546 aaPredicted RBP14.27□□□□□ -0.13
AP3S2-208ENST00000558999 KDM6BO15054 1643 aa14.26□□□□□ -0.13
AP3S2-208ENST00000558999 DIP2BQ9P265 1576 aa14.26□□□□□ -0.13
AP3S2-208ENST00000558999 BIVM-ERCC5R4GMW8 1640 aa14.26□□□□□ -0.13
AP3S2-208ENST00000558999 TOP2BQ02880 1626 aa14.24□□□□□ -0.13
AP3S2-208ENST00000558999 TSPOAP1O95153 1857 aa14.21□□□□□ -0.14
AP3S2-208ENST00000558999 ADCY10Q96PN6 1610 aa14.2□□□□□ -0.14
AP3S2-208ENST00000558999 RUSC2Q8N2Y8 1516 aa14.19□□□□□ -0.14
AP3S2-208ENST00000558999 KIAA0586Q9BVV6 1533 aa14.1□□□□□ -0.15
AP3S2-208ENST00000558999 ADGRL1O94910 1474 aa14.06□□□□□ -0.16
AP3S2-208ENST00000558999 GLI2P10070 1586 aa14.06□□□□□ -0.16
AP3S2-208ENST00000558999 PPRC1Q5VV67 1664 aaKnown RBP14.06□□□□□ -0.16
AP3S2-208ENST00000558999 PHF23Q9BUL5 403 aaPredicted RBP14.05□□□□□ -0.16
AP3S2-208ENST00000558999 PTPRGP23470 1445 aa14.04□□□□□ -0.16
AP3S2-208ENST00000558999 PLB1Q6P1J6 1458 aa14.03□□□□□ -0.16
AP3S2-208ENST00000558999 ABCC2Q92887 1545 aa14.02□□□□□ -0.16
AP3S2-208ENST00000558999 CUL7Q14999 1698 aa14.01□□□□□ -0.17
AP3S2-208ENST00000558999 HECW2Q9P2P5 1572 aa14□□□□□ -0.17
AP3S2-208ENST00000558999 ASXL2Q76L83 1435 aa14□□□□□ -0.17
AP3S2-208ENST00000558999 IGF1RP08069 1367 aa13.99□□□□□ -0.17
AP3S2-208ENST00000558999 SUPT5HO00267 1087 aaKnown RBP13.99□□□□□ -0.17
AP3S2-208ENST00000558999 TNIKQ9UKE5 1360 aa13.98□□□□□ -0.17
AP3S2-208ENST00000558999 CARMIL2Q6F5E8 1435 aa13.98□□□□□ -0.17
AP3S2-208ENST00000558999 UHRF1BP1LA0JNW5 1464 aa13.97□□□□□ -0.17
AP3S2-208ENST00000558999 COL17A1Q9UMD9 1497 aaPredicted RBP13.96□□□□□ -0.17
AP3S2-208ENST00000558999 TEX14Q8IWB6 1497 aa13.95□□□□□ -0.18
AP3S2-208ENST00000558999 MAP3K4Q9Y6R4 1608 aa13.95□□□□□ -0.18
AP3S2-208ENST00000558999 KIF27Q86VH2 1401 aa13.95□□□□□ -0.18
AP3S2-208ENST00000558999 TTBK1Q5TCY1 1321 aaPredicted RBP13.93□□□□□ -0.18
AP3S2-208ENST00000558999 UACAQ9BZF9 1416 aa13.92□□□□□ -0.18
AP3S2-208ENST00000558999 EPRSP07814 1512 aaKnown RBP13.92□□□□□ -0.18
AP3S2-208ENST00000558999 KDM5BQ9UGL1 1544 aa13.9□□□□□ -0.18
AP3S2-208ENST00000558999 IQGAP2Q13576 1575 aa13.89□□□□□ -0.19
AP3S2-208ENST00000558999 CARMIL1Q5VZK9 1371 aa13.89□□□□□ -0.19
AP3S2-208ENST00000558999 FBXO41Q8TF61 875 aa13.89□□□□□ -0.19
AP3S2-208ENST00000558999 ZCCHC11Q5TAX3 1644 aaKnown RBP13.86□□□□□ -0.19
AP3S2-208ENST00000558999 DISP1Q96F81 1524 aa13.85□□□□□ -0.19
AP3S2-208ENST00000558999 MAGI3Q5TCQ9 1506 aa13.8□□□□□ -0.2
AP3S2-208ENST00000558999 CFAP43Q8NDM7 1665 aa13.8□□□□□ -0.2
AP3S2-208ENST00000558999 WDR7Q9Y4E6 1490 aa13.8□□□□□ -0.2
AP3S2-208ENST00000558999 UGGT2Q9NYU1 1516 aa13.8□□□□□ -0.2
AP3S2-208ENST00000558999 CD109Q6YHK3 1445 aa13.78□□□□□ -0.2
AP3S2-208ENST00000558999 KIAA0556O60303 1618 aa13.77□□□□□ -0.21
AP3S2-208ENST00000558999 KIF21BO75037 1637 aa13.75□□□□□ -0.21
AP3S2-208ENST00000558999 ARAP3Q8WWN8 1544 aa13.71□□□□□ -0.21
AP3S2-208ENST00000558999 KCNH8Q96L42 1107 aa13.71□□□□□ -0.21
AP3S2-208ENST00000558999 RAPGEF2Q9Y4G8 1499 aa13.71□□□□□ -0.21
AP3S2-208ENST00000558999 ADAMTSL3P82987 1691 aa13.7□□□□□ -0.22
AP3S2-208ENST00000558999 PTPRMP28827 1452 aa13.69□□□□□ -0.22
AP3S2-208ENST00000558999 ABCA8O94911 1581 aa13.68□□□□□ -0.22
AP3S2-208ENST00000558999 SENP3Q9H4L4 574 aaPredicted RBP13.67□□□□□ -0.22
AP3S2-208ENST00000558999 PHLDB1Q86UU1 1377 aa13.67□□□□□ -0.22
AP3S2-208ENST00000558999 GOLGA3Q08378 1498 aa13.66□□□□□ -0.22
AP3S2-208ENST00000558999 CTTNBP2Q8WZ74 1663 aa13.66□□□□□ -0.22
AP3S2-208ENST00000558999 PCF11O94913 1555 aaKnown RBP13.63□□□□□ -0.23
AP3S2-208ENST00000558999 BCORL1Q5H9F3 1711 aa13.63□□□□□ -0.23
AP3S2-208ENST00000558999 LMTK3Q96Q04 1460 aa13.61□□□□□ -0.23
AP3S2-208ENST00000558999 ABCA9Q8IUA7 1624 aa13.6□□□□□ -0.23
AP3S2-208ENST00000558999 FAM9AQ8IZU1 332 aaPredicted RBP13.59□□□□□ -0.23
AP3S2-208ENST00000558999 MADDQ8WXG6 1647 aa13.59□□□□□ -0.23
AP3S2-208ENST00000558999 NEO1Q92859 1461 aa13.58□□□□□ -0.24
AP3S2-208ENST00000558999 RAPGEF3O95398 923 aa13.57□□□□□ -0.24
AP3S2-208ENST00000558999 ARID4BQ4LE39 1312 aaPredicted RBP13.56□□□□□ -0.24
AP3S2-208ENST00000558999 ATP10BO94823 1461 aa13.55□□□□□ -0.24
AP3S2-208ENST00000558999 RIMS1Q86UR5 1692 aaKnown RBP13.53□□□□□ -0.24
AP3S2-208ENST00000558999 CERKQ8TCT0 537 aa13.53□□□□□ -0.24
AP3S2-208ENST00000558999 FRMPD1Q5SYB0 1578 aa13.53□□□□□ -0.24
AP3S2-208ENST00000558999 SOCS7O14512 581 aa13.49□□□□□ -0.25
AP3S2-208ENST00000558999 HSPA2P54652 639 aa13.49□□□□□ -0.25
AP3S2-208ENST00000558999 ARHGEF40Q8TER5 1519 aa13.49□□□□□ -0.25
AP3S2-208ENST00000558999 ARID3CA6NKF2 412 aa13.48□□□□□ -0.25
AP3S2-208ENST00000558999 POGZQ7Z3K3 1410 aa13.47□□□□□ -0.25
AP3S2-208ENST00000558999 RICTORQ6R327 1708 aa13.47□□□□□ -0.25
AP3S2-208ENST00000558999 DENND4BO75064 1496 aaPredicted RBP13.47□□□□□ -0.25
AP3S2-208ENST00000558999 PRXQ9BXM0 1461 aa13.47□□□□□ -0.25
AP3S2-208ENST00000558999 FANCAO15360 1455 aa13.46□□□□□ -0.25
AP3S2-208ENST00000558999 RAPGEF6Q8TEU7 1601 aa13.45□□□□□ -0.26
AP3S2-208ENST00000558999 FHOD3Q2V2M9 1422 aa13.45□□□□□ -0.26
AP3S2-208ENST00000558999 DISP3Q9P2K9 1392 aa13.45□□□□□ -0.26
AP3S2-208ENST00000558999 ILDR2Q71H61 639 aa13.44□□□□□ -0.26
AP3S2-208ENST00000558999 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.43□□□□□ -0.26
AP3S2-208ENST00000558999 HNRNPUL2Q1KMD3 747 aaKnown RBP13.43□□□□□ -0.26
AP3S2-208ENST00000558999 AKNAQ7Z591 1439 aa13.43□□□□□ -0.26
AP3S2-208ENST00000558999 P3H3Q8IVL6 736 aa13.43□□□□□ -0.26
AP3S2-208ENST00000558999 CFAP74Q9C0B2 1584 aa13.43□□□□□ -0.26
AP3S2-208ENST00000558999 ZMYM4Q5VZL5 1548 aa13.42□□□□□ -0.26
AP3S2-208ENST00000558999 SAMD9Q5K651 1589 aa13.41□□□□□ -0.26
AP3S2-208ENST00000558999 FER1L4A9Z1Z3 1794 aa13.41□□□□□ -0.26
AP3S2-208ENST00000558999 MAGI2Q86UL8 1455 aa13.41□□□□□ -0.26
AP3S2-208ENST00000558999 TTC37Q6PGP7 1564 aa13.41□□□□□ -0.26
AP3S2-208ENST00000558999 EFCAB5A4FU69 1503 aa13.4□□□□□ -0.26
AP3S2-208ENST00000558999 PLPPR3Q6T4P5 718 aa13.4□□□□□ -0.26
AP3S2-208ENST00000558999 DMRT2Q9Y5R5 561 aa13.4□□□□□ -0.26
AP3S2-208ENST00000558999 ZFYVE16Q7Z3T8 1539 aa13.39□□□□□ -0.27
AP3S2-208ENST00000558999 SIGLEC1Q9BZZ2 1709 aa13.39□□□□□ -0.27
AP3S2-208ENST00000558999 PREX1Q8TCU6 1659 aa13.39□□□□□ -0.27
AP3S2-208ENST00000558999 SETD1BQ9UPS6 1966 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms