RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 CUL7Q14999 1698 aa23.31■■□□□ 1.32
TSPAN3-205ENST00000558745 JPH4Q96JJ6 628 aa23.26■■□□□ 1.31
TSPAN3-205ENST00000558745 ERCC6L2Q5T890 1561 aa23.25■■□□□ 1.31
TSPAN3-205ENST00000558745 FAM9AQ8IZU1 332 aaPredicted RBP23.25■■□□□ 1.31
TSPAN3-205ENST00000558745 RAPGEF2Q9Y4G8 1499 aa23.2■■□□□ 1.3
TSPAN3-205ENST00000558745 CSRNP3Q8WYN3 585 aa23.19■■□□□ 1.3
TSPAN3-205ENST00000558745 KIAA0586Q9BVV6 1533 aa23.18■■□□□ 1.3
TSPAN3-205ENST00000558745 PRG4Q92954 1404 aaPredicted RBP23.18■■□□□ 1.3
TSPAN3-205ENST00000558745 SHROOM2Q13796 1616 aa23.17■■□□□ 1.3
TSPAN3-205ENST00000558745 PRXQ9BXM0 1461 aa23.12■■□□□ 1.29
TSPAN3-205ENST00000558745 TTBK1Q5TCY1 1321 aaPredicted RBP23.04■■□□□ 1.28
TSPAN3-205ENST00000558745 EEA1Q15075 1411 aa23.03■■□□□ 1.28
TSPAN3-205ENST00000558745 EHMT2Q96KQ7 1210 aa23.03■■□□□ 1.28
TSPAN3-205ENST00000558745 IQGAP2Q13576 1575 aa23.01■■□□□ 1.27
TSPAN3-205ENST00000558745 DISP1Q96F81 1524 aa22.92■■□□□ 1.26
TSPAN3-205ENST00000558745 CARMIL2Q6F5E8 1435 aa22.91■■□□□ 1.26
TSPAN3-205ENST00000558745 CTTNBP2Q8WZ74 1663 aa22.9■■□□□ 1.26
TSPAN3-205ENST00000558745 RANGAP1P46060 587 aaPredicted RBP22.9■■□□□ 1.26
TSPAN3-205ENST00000558745 UGGT2Q9NYU1 1516 aa22.9■■□□□ 1.26
TSPAN3-205ENST00000558745 PTPRGP23470 1445 aa22.89■■□□□ 1.26
TSPAN3-205ENST00000558745 TNIKQ9UKE5 1360 aa22.88■■□□□ 1.25
TSPAN3-205ENST00000558745 P3H3Q8IVL6 736 aa22.85■■□□□ 1.25
TSPAN3-205ENST00000558745 KIF21BO75037 1637 aa22.82■■□□□ 1.24
TSPAN3-205ENST00000558745 UBTFP17480 764 aaKnown RBP22.82■■□□□ 1.24
TSPAN3-205ENST00000558745 KIAA0556O60303 1618 aa22.81■■□□□ 1.24
TSPAN3-205ENST00000558745 ADCY10Q96PN6 1610 aa22.78■■□□□ 1.24
TSPAN3-205ENST00000558745 NPM1P06748 294 aaKnown RBP eCLIP22.77■■□□□ 1.24
TSPAN3-205ENST00000558745 GOLGA3Q08378 1498 aa22.75■■□□□ 1.23
TSPAN3-205ENST00000558745 UACAQ9BZF9 1416 aa22.71■■□□□ 1.23
TSPAN3-205ENST00000558745 PLB1Q6P1J6 1458 aa22.67■■□□□ 1.22
TSPAN3-205ENST00000558745 ILDR1Q86SU0 546 aaPredicted RBP22.64■■□□□ 1.22
TSPAN3-205ENST00000558745 SAMD9Q5K651 1589 aa22.64■■□□□ 1.21
TSPAN3-205ENST00000558745 UHRF1BP1LA0JNW5 1464 aa22.63■■□□□ 1.21
TSPAN3-205ENST00000558745 FHOD3Q2V2M9 1422 aa22.63■■□□□ 1.21
TSPAN3-205ENST00000558745 ABCC2Q92887 1545 aa22.62■■□□□ 1.21
TSPAN3-205ENST00000558745 ARID3CA6NKF2 412 aa22.62■■□□□ 1.21
TSPAN3-205ENST00000558745 FAM69CQ0P6D2 419 aa22.59■■□□□ 1.21
TSPAN3-205ENST00000558745 ABCA8O94911 1581 aa22.57■■□□□ 1.2
TSPAN3-205ENST00000558745 MAPKBP1O60336 1514 aa22.57■■□□□ 1.2
TSPAN3-205ENST00000558745 KDM5BQ9UGL1 1544 aa22.55■■□□□ 1.2
TSPAN3-205ENST00000558745 ASXL2Q76L83 1435 aa22.54■■□□□ 1.2
TSPAN3-205ENST00000558745 ABCC10Q5T3U5 1492 aa22.53■■□□□ 1.2
TSPAN3-205ENST00000558745 LOC105371045A0A1W2PR82 267 aa22.52■■□□□ 1.2
TSPAN3-205ENST00000558745 ZCCHC11Q5TAX3 1644 aaKnown RBP22.51■■□□□ 1.19
TSPAN3-205ENST00000558745 KIF13AQ9H1H9 1805 aa22.51■■□□□ 1.19
TSPAN3-205ENST00000558745 ARHGAP35Q9NRY4 1499 aa22.51■■□□□ 1.19
TSPAN3-205ENST00000558745 EFCAB5A4FU69 1503 aa22.49■■□□□ 1.19
TSPAN3-205ENST00000558745 DIP2BQ9P265 1576 aa22.47■■□□□ 1.19
TSPAN3-205ENST00000558745 ATP10BO94823 1461 aa22.45■■□□□ 1.18
TSPAN3-205ENST00000558745 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.45■■□□□ 1.18
TSPAN3-205ENST00000558745 HNRNPUL2Q1KMD3 747 aaKnown RBP22.45■■□□□ 1.18
TSPAN3-205ENST00000558745 KCNH8Q96L42 1107 aa22.45■■□□□ 1.18
TSPAN3-205ENST00000558745 RAPGEF6Q8TEU7 1601 aa22.44■■□□□ 1.18
TSPAN3-205ENST00000558745 ATP1B4Q9UN42 357 aaPredicted RBP22.43■■□□□ 1.18
TSPAN3-205ENST00000558745 NUP153P49790 1475 aaKnown RBP22.4■■□□□ 1.18
TSPAN3-205ENST00000558745 EPRSP07814 1512 aaKnown RBP22.38■■□□□ 1.17
TSPAN3-205ENST00000558745 CLIP1P30622 1438 aa22.37■■□□□ 1.17
TSPAN3-205ENST00000558745 WDR7Q9Y4E6 1490 aa22.37■■□□□ 1.17
TSPAN3-205ENST00000558745 KDM4FA0A1W2PPD8 638 aa22.36■■□□□ 1.17
TSPAN3-205ENST00000558745 TSPOAP1O95153 1857 aa22.36■■□□□ 1.17
TSPAN3-205ENST00000558745 FMN1Q68DA7 1419 aa22.33■■□□□ 1.17
TSPAN3-205ENST00000558745 GLI2P10070 1586 aa22.32■■□□□ 1.16
TSPAN3-205ENST00000558745 CDK13Q14004 1512 aaKnown RBP22.29■■□□□ 1.16
TSPAN3-205ENST00000558745 PLEKHD1A6NEE1 506 aa22.28■■□□□ 1.16
TSPAN3-205ENST00000558745 CEP162Q5TB80 1403 aa22.26■■□□□ 1.15
TSPAN3-205ENST00000558745 PPRC1Q5VV67 1664 aaKnown RBP22.23■■□□□ 1.15
TSPAN3-205ENST00000558745 KDM6BO15054 1643 aa22.23■■□□□ 1.15
TSPAN3-205ENST00000558745 MAP3K4Q9Y6R4 1608 aa22.23■■□□□ 1.15
TSPAN3-205ENST00000558745 CD109Q6YHK3 1445 aa22.22■■□□□ 1.15
TSPAN3-205ENST00000558745 HECW1Q76N89 1606 aa22.21■■□□□ 1.15
TSPAN3-205ENST00000558745 CASKIN1Q8WXD9 1431 aa22.2■■□□□ 1.14
TSPAN3-205ENST00000558745 PCF11O94913 1555 aaKnown RBP22.19■■□□□ 1.14
TSPAN3-205ENST00000558745 LRRIQ1Q96JM4 1722 aa22.18■■□□□ 1.14
TSPAN3-205ENST00000558745 CFAP43Q8NDM7 1665 aa22.14■■□□□ 1.13
TSPAN3-205ENST00000558745 COL17A1Q9UMD9 1497 aaPredicted RBP22.13■■□□□ 1.13
TSPAN3-205ENST00000558745 CDK11AQ9UQ88 783 aaPredicted RBP22.12■■□□□ 1.13
TSPAN3-205ENST00000558745 MAGI3Q5TCQ9 1506 aa22.11■■□□□ 1.13
TSPAN3-205ENST00000558745 ABCA9Q8IUA7 1624 aa22.11■■□□□ 1.13
TSPAN3-205ENST00000558745 TEX14Q8IWB6 1497 aa22.1■■□□□ 1.13
TSPAN3-205ENST00000558745 FYCO1Q9BQS8 1478 aa22.09■■□□□ 1.13
TSPAN3-205ENST00000558745 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.08■■□□□ 1.122e-7■■■■■ 47.7
TSPAN3-205ENST00000558745 TROQ12816 1431 aaPredicted RBP22.05■■□□□ 1.12
TSPAN3-205ENST00000558745 CCDC18Q5T9S5 1454 aa22.04■■□□□ 1.12
TSPAN3-205ENST00000558745 TTC37Q6PGP7 1564 aa22.04■■□□□ 1.12
TSPAN3-205ENST00000558745 KIF14Q15058 1648 aa22.02■■□□□ 1.12
TSPAN3-205ENST00000558745 ADGRL1O94910 1474 aa21.99■■□□□ 1.11
TSPAN3-205ENST00000558745 HECW2Q9P2P5 1572 aa21.98■■□□□ 1.11
TSPAN3-205ENST00000558745 RAPGEF3O95398 923 aa21.98■■□□□ 1.11
TSPAN3-205ENST00000558745 VPS8Q8N3P4 1428 aa21.96■■□□□ 1.11
TSPAN3-205ENST00000558745 PLCH2O75038 1416 aa21.95■■□□□ 1.11
TSPAN3-205ENST00000558745 AKNAQ7Z591 1439 aa21.93■■□□□ 1.1
TSPAN3-205ENST00000558745 FANCAO15360 1455 aa21.93■■□□□ 1.1
TSPAN3-205ENST00000558745 NEO1Q92859 1461 aa21.93■■□□□ 1.1
TSPAN3-205ENST00000558745 ARAP3Q8WWN8 1544 aa21.92■■□□□ 1.1
TSPAN3-205ENST00000558745 MTUS2Q5JR59 1369 aa21.91■■□□□ 1.1
TSPAN3-205ENST00000558745 EFCAB2Q5VUJ9 269 aa21.9■■□□□ 1.1
TSPAN3-205ENST00000558745 FBXO41Q8TF61 875 aa21.9■■□□□ 1.1
TSPAN3-205ENST00000558745 PHLDB1Q86UU1 1377 aa21.9■■□□□ 1.1
TSPAN3-205ENST00000558745 MYO5CQ9NQX4 1742 aa21.86■■□□□ 1.09
TSPAN3-205ENST00000558745 KANK4Q5T7N3 995 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms