RNA–Protein interactions for RNA: ENST00000558548.5

MRPS11-205, Transcript of mitochondrial ribosomal protein S11, humanhuman

TSL 3

Gene MRPS11, Length 745 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS11-205ENST00000558548 VASPP50552 380 aaPredicted RBP15.52■□□□□ 0.08
MRPS11-205ENST00000558548 MNX1P50219 401 aaPredicted RBP15.45■□□□□ 0.06
MRPS11-205ENST00000558548 SCRIBQ14160 1630 aa15.45■□□□□ 0.06
MRPS11-205ENST00000558548 GABBR2O75899 941 aa15.41■□□□□ 0.06
MRPS11-205ENST00000558548 EIF4G1Q04637 1599 aaKnown RBP15.41■□□□□ 0.06
MRPS11-205ENST00000558548 NPM1P06748 294 aaKnown RBP eCLIP15.39■□□□□ 0.05
MRPS11-205ENST00000558548 SUPT5HO00267 1087 aaKnown RBP15.36■□□□□ 0.05
MRPS11-205ENST00000558548 KLHL34Q8N239 644 aa15.36■□□□□ 0.05
MRPS11-205ENST00000558548 ZBTB47Q9UFB7 747 aaPredicted RBP15.36■□□□□ 0.05
MRPS11-205ENST00000558548 IFNLR1Q8IU57 520 aaPredicted RBP15.32■□□□□ 0.04
MRPS11-205ENST00000558548 CD44P16070 742 aaKnown RBP15.31■□□□□ 0.04
MRPS11-205ENST00000558548 RSF1Q96T23 1441 aaPredicted RBP15.29■□□□□ 0.04
MRPS11-205ENST00000558548 TRIM41Q8WV44 630 aa15.29■□□□□ 0.04
MRPS11-205ENST00000558548 BAZ1AQ9NRL2 1556 aaPredicted RBP15.21■□□□□ 0.03
MRPS11-205ENST00000558548 CUX2O14529 1486 aa15.2■□□□□ 0.02
MRPS11-205ENST00000558548 NUBP1P53384 320 aa15.19■□□□□ 0.02
MRPS11-205ENST00000558548 PAK3O75914 559 aaPredicted RBP15.18■□□□□ 0.02
MRPS11-205ENST00000558548 RASEFQ8IZ41 740 aa15.18■□□□□ 0.02
MRPS11-205ENST00000558548 TSPYL2Q9H2G4 693 aaPredicted RBP15.18■□□□□ 0.02
MRPS11-205ENST00000558548 ZRANB1Q9UGI0 708 aa15.18■□□□□ 0.02
MRPS11-205ENST00000558548 SPOCK2Q92563 424 aa15.15■□□□□ 0.02
MRPS11-205ENST00000558548 LHX8Q68G74 356 aa15.1■□□□□ 0.01
MRPS11-205ENST00000558548 POTEIP0CG38 1075 aa15.09■□□□□ 0.01
MRPS11-205ENST00000558548 DCAF8Q5TAQ9 597 aa15.09■□□□□ 0.01
MRPS11-205ENST00000558548 FAM212AQ96EL1 285 aa15.08■□□□□ 0
MRPS11-205ENST00000558548 ERCC6Q03468 1493 aa15.06■□□□□ 0
MRPS11-205ENST00000558548 MROH2BQ7Z745 1585 aa15.06■□□□□ 0
MRPS11-205ENST00000558548 CLCN6P51797 869 aa15.04■□□□□ -0
MRPS11-205ENST00000558548 ZNF579Q8NAF0 562 aaKnown RBP15.04■□□□□ -0
MRPS11-205ENST00000558548 SMARCA4P51532 1647 aa15.03■□□□□ -0
MRPS11-205ENST00000558548 PEG3Q9GZU2 1588 aa15.02■□□□□ -0
MRPS11-205ENST00000558548 PHF12Q96QT6 1004 aa15.02■□□□□ -0
MRPS11-205ENST00000558548 CCDC61Q9Y6R9 512 aa15.02■□□□□ -0
MRPS11-205ENST00000558548 CIZ1Q9ULV3 898 aaPredicted RBP14.99□□□□□ -0.01
MRPS11-205ENST00000558548 GSE1Q14687 1217 aa14.98□□□□□ -0.01
MRPS11-205ENST00000558548 TOP2AP11388 1531 aaKnown RBP14.97□□□□□ -0.01
MRPS11-205ENST00000558548 DCBLD2Q96PD2 775 aa14.97□□□□□ -0.01
MRPS11-205ENST00000558548 WIZO95785 1651 aa14.93□□□□□ -0.02
MRPS11-205ENST00000558548 GALR2O43603 387 aaPredicted RBP14.91□□□□□ -0.02
MRPS11-205ENST00000558548 PYGBP11216 843 aa14.9□□□□□ -0.02
MRPS11-205ENST00000558548 KIF12Q96FN5 646 aa14.89□□□□□ -0.03
MRPS11-205ENST00000558548 MAP3K13O43283 966 aa14.86□□□□□ -0.03
MRPS11-205ENST00000558548 MS4A3Q96HJ5 214 aa14.82□□□□□ -0.04
MRPS11-205ENST00000558548 PCDHB13Q9Y5F0 798 aa14.8□□□□□ -0.04
MRPS11-205ENST00000558548 NESP48681 1621 aa14.8□□□□□ -0.04
MRPS11-205ENST00000558548 SMARCA2P51531 1590 aa14.79□□□□□ -0.04
MRPS11-205ENST00000558548 CHRM1P11229 460 aaPredicted RBP14.76□□□□□ -0.05
MRPS11-205ENST00000558548 SGIP1Q9BQI5 828 aa14.75□□□□□ -0.05
MRPS11-205ENST00000558548 PKD2Q13563 968 aa14.73□□□□□ -0.05
MRPS11-205ENST00000558548 IFNL1Q8IU54 200 aa14.73□□□□□ -0.05
MRPS11-205ENST00000558548 NCAPD3P42695 1498 aa14.72□□□□□ -0.05
MRPS11-205ENST00000558548 PCDHB8Q9UN66 801 aa14.71□□□□□ -0.05
MRPS11-205ENST00000558548 ECM2O94769 699 aaPredicted RBP14.69□□□□□ -0.06
MRPS11-205ENST00000558548 TRPC6Q9Y210 931 aa14.69□□□□□ -0.06
MRPS11-205ENST00000558548 CCDC88BA6NC98 1476 aa14.68□□□□□ -0.06
MRPS11-205ENST00000558548 THOC2Q8NI27 1593 aaKnown RBP14.68□□□□□ -0.06
MRPS11-205ENST00000558548 HMGXB3Q12766 1538 aa14.66□□□□□ -0.06
MRPS11-205ENST00000558548 ATAD2BQ9ULI0 1458 aa14.66□□□□□ -0.06
MRPS11-205ENST00000558548 ZNF467Q7Z7K2 595 aaPredicted RBP14.65□□□□□ -0.06
MRPS11-205ENST00000558548 PELP1Q8IZL8 1130 aaKnown RBP14.63□□□□□ -0.07
MRPS11-205ENST00000558548 POTEB2H3BUK9 544 aa14.61□□□□□ -0.07
MRPS11-205ENST00000558548 EEA1Q15075 1411 aa14.6□□□□□ -0.07
MRPS11-205ENST00000558548 TIE1P35590 1138 aa14.58□□□□□ -0.08
MRPS11-205ENST00000558548 RNF25Q96BH1 459 aaPredicted RBP14.58□□□□□ -0.08
MRPS11-205ENST00000558548 BMP2KQ9NSY1 1161 aaPredicted RBP14.58□□□□□ -0.08
MRPS11-205ENST00000558548 BAZ1BQ9UIG0 1483 aaKnown RBP14.57□□□□□ -0.08
MRPS11-205ENST00000558548 OTUD5Q96G74 571 aa14.56□□□□□ -0.08
MRPS11-205ENST00000558548 RIOK3O14730 519 aaKnown RBP14.55□□□□□ -0.08
MRPS11-205ENST00000558548 ATMINO43313 823 aaPredicted RBP14.55□□□□□ -0.08
MRPS11-205ENST00000558548 ASTLQ6HA08 431 aaPredicted RBP14.55□□□□□ -0.08
MRPS11-205ENST00000558548 TTLL13PA6NNM8 815 aa14.54□□□□□ -0.08
MRPS11-205ENST00000558548 RGL2O15211 777 aa14.54□□□□□ -0.08
MRPS11-205ENST00000558548 TMEM106CQ9BVX2 250 aa14.54□□□□□ -0.08
MRPS11-205ENST00000558548 PSEN1P49768 467 aa14.53□□□□□ -0.08
MRPS11-205ENST00000558548 ATN1P54259 1190 aaPredicted RBP14.53□□□□□ -0.08
MRPS11-205ENST00000558548 PDAP1Q13442 181 aaKnown RBP14.52□□□□□ -0.09
MRPS11-205ENST00000558548 AMER1Q5JTC6 1135 aaPredicted RBP14.52□□□□□ -0.09
MRPS11-205ENST00000558548 RTN4Q9NQC3 1192 aaKnown RBP14.51□□□□□ -0.09
MRPS11-205ENST00000558548 METRNQ9UJH8 293 aa14.5□□□□□ -0.09
MRPS11-205ENST00000558548 KIF21AQ7Z4S6 1674 aa14.49□□□□□ -0.09
MRPS11-205ENST00000558548 VGFO15240 615 aaPredicted RBP14.46□□□□□ -0.09
MRPS11-205ENST00000558548 SLC39A7Q92504 469 aa14.46□□□□□ -0.09
MRPS11-205ENST00000558548 TRIM35Q9UPQ4 493 aa14.46□□□□□ -0.09
MRPS11-205ENST00000558548 C7P10643 843 aa14.43□□□□□ -0.1
MRPS11-205ENST00000558548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.42□□□□□ -0.1
MRPS11-205ENST00000558548 ZFP91Q96JP5 570 aaPredicted RBP14.42□□□□□ -0.1
MRPS11-205ENST00000558548 TAOK2Q9UL54 1235 aa14.42□□□□□ -0.1
MRPS11-205ENST00000558548 PRDM2Q13029 1718 aa14.4□□□□□ -0.1
MRPS11-205ENST00000558548 WRNQ14191 1432 aaPredicted RBP eCLIP14.4□□□□□ -0.1
MRPS11-205ENST00000558548 LAMC3Q9Y6N6 1575 aa14.39□□□□□ -0.11
MRPS11-205ENST00000558548 POTEJP0CG39 1038 aa14.37□□□□□ -0.11
MRPS11-205ENST00000558548 GOLGA2Q08379 1002 aa14.37□□□□□ -0.11
MRPS11-205ENST00000558548 CABP2Q9NPB3 220 aa14.37□□□□□ -0.11
MRPS11-205ENST00000558548 RIMBP3CA6NJZ7 1639 aa14.37□□□□□ -0.11
MRPS11-205ENST00000558548 RIMBP3BA6NNM3 1639 aa14.37□□□□□ -0.11
MRPS11-205ENST00000558548 RIMBP3Q9UFD9 1639 aa14.37□□□□□ -0.11
MRPS11-205ENST00000558548 ABCC8Q09428 1581 aa14.36□□□□□ -0.11
MRPS11-205ENST00000558548 PDS5BQ9NTI5 1447 aa14.36□□□□□ -0.11
MRPS11-205ENST00000558548 BIVM-ERCC5R4GMW8 1640 aa14.36□□□□□ -0.11
MRPS11-205ENST00000558548 TOP2BQ02880 1626 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms