RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 SP7Q8TDD2 431 aaPredicted RBP8.25□□□□□ -1.09
HERC1-203ENST00000558532 PHF12Q96QT6 1004 aa8.25□□□□□ -1.09
HERC1-203ENST00000558532 DCAF8Q5TAQ9 597 aa8.24□□□□□ -1.09
HERC1-203ENST00000558532 GSE1Q14687 1217 aa8.23□□□□□ -1.09
HERC1-203ENST00000558532 KIF12Q96FN5 646 aa8.2□□□□□ -1.1
HERC1-203ENST00000558532 CIZ1Q9ULV3 898 aaPredicted RBP8.2□□□□□ -1.1
HERC1-203ENST00000558532 GABBR2O75899 941 aa8.19□□□□□ -1.1
HERC1-203ENST00000558532 PYGBP11216 843 aa8.18□□□□□ -1.1
HERC1-203ENST00000558532 PKD2Q13563 968 aa8.17□□□□□ -1.1
HERC1-203ENST00000558532 MAP3K13O43283 966 aa8.16□□□□□ -1.1
HERC1-203ENST00000558532 GALR2O43603 387 aaPredicted RBP8.16□□□□□ -1.1
HERC1-203ENST00000558532 MS4A3Q96HJ5 214 aa8.16□□□□□ -1.1
HERC1-203ENST00000558532 CLCN6P51797 869 aa8.15□□□□□ -1.1
HERC1-203ENST00000558532 CHRM1P11229 460 aaPredicted RBP8.14□□□□□ -1.11
HERC1-203ENST00000558532 TRIM41Q8WV44 630 aa8.12□□□□□ -1.11
HERC1-203ENST00000558532 PCDHB13Q9Y5F0 798 aa8.12□□□□□ -1.11
HERC1-203ENST00000558532 IFNL1Q8IU54 200 aa8.11□□□□□ -1.11
HERC1-203ENST00000558532 SGIP1Q9BQI5 828 aa8.11□□□□□ -1.11
HERC1-203ENST00000558532 TRPC6Q9Y210 931 aa8.11□□□□□ -1.11
HERC1-203ENST00000558532 RNF25Q96BH1 459 aaPredicted RBP8.1□□□□□ -1.11
HERC1-203ENST00000558532 ECM2O94769 699 aaPredicted RBP8.08□□□□□ -1.12
HERC1-203ENST00000558532 PCDHB8Q9UN66 801 aa8.08□□□□□ -1.12
HERC1-203ENST00000558532 RTN4Q9NQC3 1192 aaKnown RBP8.07□□□□□ -1.12
HERC1-203ENST00000558532 AMER1Q5JTC6 1135 aaPredicted RBP8.06□□□□□ -1.12
HERC1-203ENST00000558532 POTEIP0CG38 1075 aa8.05□□□□□ -1.12
HERC1-203ENST00000558532 ZNF467Q7Z7K2 595 aaPredicted RBP8.05□□□□□ -1.12
HERC1-203ENST00000558532 RGL2O15211 777 aa8.04□□□□□ -1.12
HERC1-203ENST00000558532 BMP2KQ9NSY1 1161 aaPredicted RBP8.03□□□□□ -1.12
HERC1-203ENST00000558532 RIOK3O14730 519 aaKnown RBP8.02□□□□□ -1.13
HERC1-203ENST00000558532 TIE1P35590 1138 aa8.02□□□□□ -1.13
HERC1-203ENST00000558532 ASTLQ6HA08 431 aaPredicted RBP8.01□□□□□ -1.13
HERC1-203ENST00000558532 TTLL13PA6NNM8 815 aa8□□□□□ -1.13
HERC1-203ENST00000558532 ATMINO43313 823 aaPredicted RBP8□□□□□ -1.13
HERC1-203ENST00000558532 DCBLD2Q96PD2 775 aa8□□□□□ -1.13
HERC1-203ENST00000558532 PSEN1P49768 467 aa7.98□□□□□ -1.13
HERC1-203ENST00000558532 ATN1P54259 1190 aaPredicted RBP7.98□□□□□ -1.13
HERC1-203ENST00000558532 PDAP1Q13442 181 aaKnown RBP7.98□□□□□ -1.13
HERC1-203ENST00000558532 PELP1Q8IZL8 1130 aaKnown RBP7.98□□□□□ -1.13
HERC1-203ENST00000558532 TMEM106CQ9BVX2 250 aa7.98□□□□□ -1.13
HERC1-203ENST00000558532 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.96□□□□□ -1.14
HERC1-203ENST00000558532 VGFO15240 615 aaPredicted RBP7.96□□□□□ -1.14
HERC1-203ENST00000558532 ZFP91Q96JP5 570 aaPredicted RBP7.96□□□□□ -1.14
HERC1-203ENST00000558532 TRIM35Q9UPQ4 493 aa7.94□□□□□ -1.14
HERC1-203ENST00000558532 TAOK2Q9UL54 1235 aa7.9□□□□□ -1.14
HERC1-203ENST00000558532 BCL11BQ9C0K0 894 aaPredicted RBP7.89□□□□□ -1.15
HERC1-203ENST00000558532 STK25O00506 426 aa7.88□□□□□ -1.15
HERC1-203ENST00000558532 CABP2Q9NPB3 220 aa7.88□□□□□ -1.15
HERC1-203ENST00000558532 HS6ST3Q8IZP7 471 aa7.87□□□□□ -1.15
HERC1-203ENST00000558532 SLC39A7Q92504 469 aa7.87□□□□□ -1.15
HERC1-203ENST00000558532 METRNQ9UJH8 293 aa7.87□□□□□ -1.15
HERC1-203ENST00000558532 STK24Q9Y6E0 443 aa7.87□□□□□ -1.15
HERC1-203ENST00000558532 POTEFA5A3E0 1075 aa7.86□□□□□ -1.15
HERC1-203ENST00000558532 IER5LQ5T953 404 aa7.86□□□□□ -1.15
HERC1-203ENST00000558532 C7P10643 843 aa7.85□□□□□ -1.15
HERC1-203ENST00000558532 IRX5P78411 483 aaPredicted RBP7.85□□□□□ -1.15
HERC1-203ENST00000558532 EFCAB3Q8N7B9 438 aa7.85□□□□□ -1.15
HERC1-203ENST00000558532 DCAF8L2P0C7V8 631 aa7.84□□□□□ -1.15
HERC1-203ENST00000558532 CHGAP10645 457 aaKnown RBP7.84□□□□□ -1.15
HERC1-203ENST00000558532 COLQQ9Y215 455 aaPredicted RBP7.84□□□□□ -1.15
HERC1-203ENST00000558532 GOLGA2Q08379 1002 aa7.83□□□□□ -1.16
HERC1-203ENST00000558532 ILDR1Q86SU0 546 aaPredicted RBP7.83□□□□□ -1.16
HERC1-203ENST00000558532 MKRN3Q13064 507 aaKnown RBP7.82□□□□□ -1.16
HERC1-203ENST00000558532 PDCD7Q8N8D1 485 aaKnown RBP7.81□□□□□ -1.16
HERC1-203ENST00000558532 DNAJC5Q9H3Z4 198 aa7.81□□□□□ -1.16
HERC1-203ENST00000558532 POTEB2H3BUK9 544 aa7.8□□□□□ -1.16
HERC1-203ENST00000558532 MFRPQ9BY79 579 aa7.79□□□□□ -1.16
HERC1-203ENST00000558532 SEC24BO95487 1268 aa7.78□□□□□ -1.16
HERC1-203ENST00000558532 NKX1-1Q15270 411 aaPredicted RBP7.78□□□□□ -1.16
HERC1-203ENST00000558532 OCEL1Q9H607 264 aa7.78□□□□□ -1.16
HERC1-203ENST00000558532 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.78□□□□□ -1.16
HERC1-203ENST00000558532 PHF8Q9UPP1 1060 aa7.78□□□□□ -1.16
HERC1-203ENST00000558532 SOX12O15370 315 aa7.77□□□□□ -1.17
HERC1-203ENST00000558532 POTEJP0CG39 1038 aa7.77□□□□□ -1.17
HERC1-203ENST00000558532 PLCG2P16885 1265 aa7.77□□□□□ -1.17
HERC1-203ENST00000558532 FBXO22Q8NEZ5 403 aa7.77□□□□□ -1.17
HERC1-203ENST00000558532 MS4A4AQ96JQ5 239 aa7.77□□□□□ -1.17
HERC1-203ENST00000558532 LHX8Q68G74 356 aa7.74□□□□□ -1.17
HERC1-203ENST00000558532 DPY19L2Q6NUT2 758 aa7.74□□□□□ -1.17
HERC1-203ENST00000558532 NLRP6P59044 892 aa7.73□□□□□ -1.17
HERC1-203ENST00000558532 BBXQ8WY36 941 aaPredicted RBP7.7□□□□□ -1.18
HERC1-203ENST00000558532 GTPBP6O43824 516 aaPredicted RBP7.68□□□□□ -1.18
HERC1-203ENST00000558532 PPP1R37O75864 691 aa7.67□□□□□ -1.18
HERC1-203ENST00000558532 OTUD5Q96G74 571 aa7.67□□□□□ -1.18
HERC1-203ENST00000558532 MICALL2Q8IY33 904 aa7.65□□□□□ -1.18
HERC1-203ENST00000558532 L3MBTL3Q96JM7 780 aaPredicted RBP7.65□□□□□ -1.18
HERC1-203ENST00000558532 TMEM121BQ9BXQ6 578 aaPredicted RBP7.65□□□□□ -1.18
HERC1-203ENST00000558532 BOLA1Q9Y3E2 137 aa7.65□□□□□ -1.18
HERC1-203ENST00000558532 RYDENQ9NUL5 291 aaKnown RBP7.63□□□□□ -1.19
HERC1-203ENST00000558532 MAMSTRQ6ZN01 415 aa7.62□□□□□ -1.19
HERC1-203ENST00000558532 SCUBE2Q9NQ36 999 aa7.61□□□□□ -1.19
HERC1-203ENST00000558532 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.61□□□□□ -1.19
HERC1-203ENST00000558532 G3V3G9 751 aa7.59□□□□□ -1.19
HERC1-203ENST00000558532 TMEM92Q6UXU6 159 aa7.59□□□□□ -1.19
HERC1-203ENST00000558532 C3orf67Q6ZVT6 689 aa7.59□□□□□ -1.19
HERC1-203ENST00000558532 PAXIP1Q6ZW49 1069 aaPredicted RBP7.58□□□□□ -1.2
HERC1-203ENST00000558532 SPRYD3Q8NCJ5 442 aa7.58□□□□□ -1.2
HERC1-203ENST00000558532 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.58□□□□□ -1.2
HERC1-203ENST00000558532 CFAP44Q96MT7 982 aa7.56□□□□□ -1.2
HERC1-203ENST00000558532 SLAIN1Q8ND83 568 aa7.55□□□□□ -1.2
HERC1-203ENST00000558532 KIF3CO14782 793 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms