RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 SHROOM4Q9ULL8 1493 aa12.31□□□□□ -0.44
MARK3-212ENST00000558223 SPDYE4A6NLX3 237 aa12.3□□□□□ -0.44
MARK3-212ENST00000558223 PRR29P0C7W0 189 aa12.28□□□□□ -0.44
MARK3-212ENST00000558223 HOMEZQ8IX15 550 aa12.24□□□□□ -0.45
MARK3-212ENST00000558223 PAXIP1Q6ZW49 1069 aaPredicted RBP12.22□□□□□ -0.45
MARK3-212ENST00000558223 BBXQ8WY36 941 aaPredicted RBP12.22□□□□□ -0.45
MARK3-212ENST00000558223 GABBR2O75899 941 aa12.21□□□□□ -0.45
MARK3-212ENST00000558223 CFAP44Q96MT7 982 aa12.21□□□□□ -0.45
MARK3-212ENST00000558223 VASPP50552 380 aaPredicted RBP12.2□□□□□ -0.46
MARK3-212ENST00000558223 PKD2Q13563 968 aa12.16□□□□□ -0.46
MARK3-212ENST00000558223 NACADO15069 1562 aa12.13□□□□□ -0.47
MARK3-212ENST00000558223 NBR1Q14596 966 aa12.11□□□□□ -0.47
MARK3-212ENST00000558223 STAG3Q9UJ98 1225 aa12.11□□□□□ -0.47
MARK3-212ENST00000558223 IFNLR1Q8IU57 520 aaPredicted RBP12.1□□□□□ -0.47
MARK3-212ENST00000558223 FARP1Q9Y4F1 1045 aaPredicted RBP12.09□□□□□ -0.47
MARK3-212ENST00000558223 SUPT5HO00267 1087 aaKnown RBP12.08□□□□□ -0.48
MARK3-212ENST00000558223 CD44P16070 742 aaKnown RBP12.05□□□□□ -0.48
MARK3-212ENST00000558223 CREBZFQ9NS37 354 aa12.05□□□□□ -0.48
MARK3-212ENST00000558223 TMEM132AQ24JP5 1023 aa12.04□□□□□ -0.48
MARK3-212ENST00000558223 PROM2Q8N271 834 aa12.04□□□□□ -0.48
MARK3-212ENST00000558223 SPRYD3Q8NCJ5 442 aa12.03□□□□□ -0.48
MARK3-212ENST00000558223 C14orf37Q86TY3 774 aa12.01□□□□□ -0.49
MARK3-212ENST00000558223 TSHZ2Q9NRE2 1034 aa12.01□□□□□ -0.49
MARK3-212ENST00000558223 NPM1P06748 294 aaKnown RBP eCLIP11.99□□□□□ -0.49
MARK3-212ENST00000558223 LHX8Q68G74 356 aa11.99□□□□□ -0.49
MARK3-212ENST00000558223 POTEIP0CG38 1075 aa11.98□□□□□ -0.49
MARK3-212ENST00000558223 ABCC9O60706 1549 aa11.96□□□□□ -0.49
MARK3-212ENST00000558223 ECM2O94769 699 aaPredicted RBP11.95□□□□□ -0.5
MARK3-212ENST00000558223 RB1CC1Q8TDY2 1594 aa11.92□□□□□ -0.5
MARK3-212ENST00000558223 RANGAP1P46060 587 aaPredicted RBP11.92□□□□□ -0.5
MARK3-212ENST00000558223 CLCN6P51797 869 aa11.88□□□□□ -0.51
MARK3-212ENST00000558223 MNX1P50219 401 aaPredicted RBP11.87□□□□□ -0.51
MARK3-212ENST00000558223 ZRANB1Q9UGI0 708 aa11.87□□□□□ -0.51
MARK3-212ENST00000558223 SCRIBQ14160 1630 aa11.86□□□□□ -0.51
MARK3-212ENST00000558223 ZNF579Q8NAF0 562 aaKnown RBP11.85□□□□□ -0.51
MARK3-212ENST00000558223 SPOCK2Q92563 424 aa11.8□□□□□ -0.52
MARK3-212ENST00000558223 DCBLD2Q96PD2 775 aa11.8□□□□□ -0.52
MARK3-212ENST00000558223 KLHL34Q8N239 644 aa11.79□□□□□ -0.52
MARK3-212ENST00000558223 DNAJC5Q9H3Z4 198 aa11.79□□□□□ -0.52
MARK3-212ENST00000558223 RSF1Q96T23 1441 aaPredicted RBP11.78□□□□□ -0.52
MARK3-212ENST00000558223 GALR2O43603 387 aaPredicted RBP11.76□□□□□ -0.53
MARK3-212ENST00000558223 PODXL2Q9NZ53 605 aa11.75□□□□□ -0.53
MARK3-212ENST00000558223 RGL2O15211 777 aa11.74□□□□□ -0.53
MARK3-212ENST00000558223 MIER1Q8N108 512 aa11.72□□□□□ -0.53
MARK3-212ENST00000558223 PHF12Q96QT6 1004 aa11.7□□□□□ -0.54
MARK3-212ENST00000558223 CHGAP10645 457 aaKnown RBP11.69□□□□□ -0.54
MARK3-212ENST00000558223 PAK3O75914 559 aaPredicted RBP11.68□□□□□ -0.54
MARK3-212ENST00000558223 BAZ1AQ9NRL2 1556 aaPredicted RBP11.66□□□□□ -0.54
MARK3-212ENST00000558223 PLEKHG5O94827 1062 aa11.62□□□□□ -0.55
MARK3-212ENST00000558223 PLCD3Q8N3E9 789 aa11.62□□□□□ -0.55
MARK3-212ENST00000558223 TSPYL2Q9H2G4 693 aaPredicted RBP11.61□□□□□ -0.55
MARK3-212ENST00000558223 POTEB2H3BUK9 544 aa11.6□□□□□ -0.55
MARK3-212ENST00000558223 CECR2Q9BXF3 1484 aa11.58□□□□□ -0.56
MARK3-212ENST00000558223 PELP1Q8IZL8 1130 aaKnown RBP11.58□□□□□ -0.56
MARK3-212ENST00000558223 MROH2BQ7Z745 1585 aa11.56□□□□□ -0.56
MARK3-212ENST00000558223 RASEFQ8IZ41 740 aa11.56□□□□□ -0.56
MARK3-212ENST00000558223 OTUD5Q96G74 571 aa11.56□□□□□ -0.56
MARK3-212ENST00000558223 CCDC61Q9Y6R9 512 aa11.55□□□□□ -0.56
MARK3-212ENST00000558223 MS4A3Q96HJ5 214 aa11.53□□□□□ -0.56
MARK3-212ENST00000558223 NUBP1P53384 320 aa11.5□□□□□ -0.57
MARK3-212ENST00000558223 ASTLQ6HA08 431 aaPredicted RBP11.48□□□□□ -0.57
MARK3-212ENST00000558223 KIF12Q96FN5 646 aa11.48□□□□□ -0.57
MARK3-212ENST00000558223 ZBTB47Q9UFB7 747 aaPredicted RBP11.48□□□□□ -0.57
MARK3-212ENST00000558223 SMARCA4P51532 1647 aa11.47□□□□□ -0.57
MARK3-212ENST00000558223 ATMINO43313 823 aaPredicted RBP11.47□□□□□ -0.57
MARK3-212ENST00000558223 HS6ST3Q8IZP7 471 aa11.46□□□□□ -0.57
MARK3-212ENST00000558223 TRIM41Q8WV44 630 aa11.46□□□□□ -0.57
MARK3-212ENST00000558223 CIZ1Q9ULV3 898 aaPredicted RBP11.46□□□□□ -0.57
MARK3-212ENST00000558223 TOP2AP11388 1531 aaKnown RBP11.45□□□□□ -0.58
MARK3-212ENST00000558223 UNC13AQ9UPW8 1703 aa11.43□□□□□ -0.58
MARK3-212ENST00000558223 NPM2Q86SE8 214 aaKnown RBP11.43□□□□□ -0.58
MARK3-212ENST00000558223 WIZO95785 1651 aa11.43□□□□□ -0.58
MARK3-212ENST00000558223 MAP3K13O43283 966 aa11.42□□□□□ -0.58
MARK3-212ENST00000558223 METRNQ9UJH8 293 aa11.42□□□□□ -0.58
MARK3-212ENST00000558223 BICRAQ9NZM4 1560 aa11.41□□□□□ -0.58
MARK3-212ENST00000558223 PEG3Q9GZU2 1588 aa11.41□□□□□ -0.58
MARK3-212ENST00000558223 POTEJP0CG39 1038 aa11.4□□□□□ -0.58
MARK3-212ENST00000558223 C7P10643 843 aa11.39□□□□□ -0.59
MARK3-212ENST00000558223 SLC39A7Q92504 469 aa11.39□□□□□ -0.59
MARK3-212ENST00000558223 BRPF1P55201 1214 aaPredicted RBP11.38□□□□□ -0.59
MARK3-212ENST00000558223 TRPC6Q9Y210 931 aa11.38□□□□□ -0.59
MARK3-212ENST00000558223 UBTFP17480 764 aaKnown RBP11.37□□□□□ -0.59
MARK3-212ENST00000558223 ATN1P54259 1190 aaPredicted RBP11.37□□□□□ -0.59
MARK3-212ENST00000558223 TRIM26Q12899 539 aaPredicted RBP11.36□□□□□ -0.59
MARK3-212ENST00000558223 PLSCR2Q9NRY7 297 aa11.35□□□□□ -0.59
MARK3-212ENST00000558223 FAM212AQ96EL1 285 aa11.34□□□□□ -0.59
MARK3-212ENST00000558223 SMARCA2P51531 1590 aa11.33□□□□□ -0.6
MARK3-212ENST00000558223 LMOD2Q6P5Q4 547 aa11.33□□□□□ -0.6
MARK3-212ENST00000558223 P3H3Q8IVL6 736 aa11.33□□□□□ -0.6
MARK3-212ENST00000558223 DCAF8Q5TAQ9 597 aa11.32□□□□□ -0.6
MARK3-212ENST00000558223 CCDC88BA6NC98 1476 aa11.32□□□□□ -0.6
MARK3-212ENST00000558223 BMP2KQ9NSY1 1161 aaPredicted RBP11.31□□□□□ -0.6
MARK3-212ENST00000558223 NEUROD2Q15784 382 aa11.3□□□□□ -0.6
MARK3-212ENST00000558223 POTEFA5A3E0 1075 aa11.29□□□□□ -0.6
MARK3-212ENST00000558223 GTPBP6O43824 516 aaPredicted RBP11.29□□□□□ -0.6
MARK3-212ENST00000558223 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.29□□□□□ -0.6
MARK3-212ENST00000558223 SGIP1Q9BQI5 828 aa11.29□□□□□ -0.6
MARK3-212ENST00000558223 PCDHB13Q9Y5F0 798 aa11.29□□□□□ -0.6
MARK3-212ENST00000558223 POTEMA6NI47 508 aa11.28□□□□□ -0.6
MARK3-212ENST00000558223 ATAD2BQ9ULI0 1458 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms