RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 DNAJC5Q9H3Z4 198 aa34.82■■■■□ 3.16
CASC4-204ENST00000557945 GOLGA3Q08378 1498 aa34.8■■■■□ 3.16
CASC4-204ENST00000557945 UBTFP17480 764 aaKnown RBP34.75■■■■□ 3.15
CASC4-204ENST00000557945 JPH4Q96JJ6 628 aa34.73■■■■□ 3.15
CASC4-204ENST00000557945 CTTNBP2Q8WZ74 1663 aa34.71■■■■□ 3.15
CASC4-204ENST00000557945 IQGAP2Q13576 1575 aa34.7■■■■□ 3.15
CASC4-204ENST00000557945 SHROOM2Q13796 1616 aa34.63■■■■□ 3.13
CASC4-204ENST00000557945 PRG4Q92954 1404 aaPredicted RBP34.6■■■■□ 3.13
CASC4-204ENST00000557945 ARHGEF11O15085 1522 aa34.58■■■■□ 3.13
CASC4-204ENST00000557945 LOC105371045A0A1W2PR82 267 aa34.55■■■■□ 3.12
CASC4-204ENST00000557945 RANGAP1P46060 587 aaPredicted RBP34.55■■■■□ 3.12
CASC4-204ENST00000557945 RIMBP3CA6NJZ7 1639 aa34.52■■■■□ 3.12
CASC4-204ENST00000557945 RIMBP3BA6NNM3 1639 aa34.52■■■■□ 3.12
CASC4-204ENST00000557945 RIMBP3Q9UFD9 1639 aa34.52■■■■□ 3.12
CASC4-204ENST00000557945 UGGT2Q9NYU1 1516 aa34.51■■■■□ 3.12
CASC4-204ENST00000557945 ERCC6L2Q5T890 1561 aa34.51■■■■□ 3.11
CASC4-204ENST00000557945 CARMIL2Q6F5E8 1435 aa34.47■■■■□ 3.11
CASC4-204ENST00000557945 TNIKQ9UKE5 1360 aa34.45■■■■□ 3.11
CASC4-204ENST00000557945 DISP1Q96F81 1524 aa34.41■■■■□ 3.1
CASC4-204ENST00000557945 P3H3Q8IVL6 736 aa34.36■■■■□ 3.09
CASC4-204ENST00000557945 KIAA0556O60303 1618 aa34.36■■■■□ 3.09
CASC4-204ENST00000557945 ARAP1Q96P48 1450 aa34.35■■■■□ 3.09
CASC4-204ENST00000557945 TTBK1Q5TCY1 1321 aaPredicted RBP34.34■■■■□ 3.09
CASC4-204ENST00000557945 CYB5RLQ6IPT4 315 aa34.33■■■■□ 3.09
CASC4-204ENST00000557945 SAMD9Q5K651 1589 aa34.29■■■■□ 3.08
CASC4-204ENST00000557945 EFCAB5A4FU69 1503 aa34.27■■■■□ 3.08
CASC4-204ENST00000557945 PTPRGP23470 1445 aa34.27■■■■□ 3.08
CASC4-204ENST00000557945 CLIP1P30622 1438 aa34.21■■■■□ 3.07
CASC4-204ENST00000557945 FHOD3Q2V2M9 1422 aa34.2■■■■□ 3.07
CASC4-204ENST00000557945 ARHGAP35Q9NRY4 1499 aa34.19■■■■□ 3.06
CASC4-204ENST00000557945 CEP162Q5TB80 1403 aa34.18■■■■□ 3.06
CASC4-204ENST00000557945 UACAQ9BZF9 1416 aa34.03■■■■□ 3.04
CASC4-204ENST00000557945 PLB1Q6P1J6 1458 aa34.01■■■■□ 3.03
CASC4-204ENST00000557945 FMN1Q68DA7 1419 aa33.97■■■■□ 3.03
CASC4-204ENST00000557945 ADCY10Q96PN6 1610 aa33.95■■■■□ 3.02
CASC4-204ENST00000557945 ABCA8O94911 1581 aa33.94■■■■□ 3.02
CASC4-204ENST00000557945 ABCC2Q92887 1545 aa33.93■■■■□ 3.02
CASC4-204ENST00000557945 UHRF1BP1LA0JNW5 1464 aa33.92■■■■□ 3.02
CASC4-204ENST00000557945 NPM1P06748 294 aaKnown RBP eCLIP33.89■■■■□ 3.02
CASC4-204ENST00000557945 RAPGEF6Q8TEU7 1601 aa33.88■■■■□ 3.01
CASC4-204ENST00000557945 ATP1B4Q9UN42 357 aaPredicted RBP33.86■■■■□ 3.01
CASC4-204ENST00000557945 ARID3CA6NKF2 412 aa33.84■■■■□ 3.01
CASC4-204ENST00000557945 NUP153P49790 1475 aaKnown RBP33.77■■■■□ 3
CASC4-204ENST00000557945 KDM5BQ9UGL1 1544 aa33.76■■■■□ 3
CASC4-204ENST00000557945 CASKIN1Q8WXD9 1431 aa33.76■■■□□ 2.99
CASC4-204ENST00000557945 PCF11O94913 1555 aaKnown RBP33.76■■■□□ 2.99
CASC4-204ENST00000557945 HECW1Q76N89 1606 aa33.73■■■□□ 2.99
CASC4-204ENST00000557945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.72■■■□□ 2.99
CASC4-204ENST00000557945 HNRNPUL2Q1KMD3 747 aaKnown RBP33.72■■■□□ 2.99
CASC4-204ENST00000557945 VPS8Q8N3P4 1428 aa33.72■■■□□ 2.99
CASC4-204ENST00000557945 ZCCHC11Q5TAX3 1644 aaKnown RBP33.71■■■□□ 2.99
CASC4-204ENST00000557945 ATP10BO94823 1461 aa33.7■■■□□ 2.99
CASC4-204ENST00000557945 FYCO1Q9BQS8 1478 aa33.7■■■□□ 2.98
CASC4-204ENST00000557945 EPRSP07814 1512 aaKnown RBP33.63■■■□□ 2.97
CASC4-204ENST00000557945 CDK13Q14004 1512 aaKnown RBP33.62■■■□□ 2.97
CASC4-204ENST00000557945 MAPKBP1O60336 1514 aa33.61■■■□□ 2.97
CASC4-204ENST00000557945 ASXL2Q76L83 1435 aa33.6■■■□□ 2.97
CASC4-204ENST00000557945 CCDC18Q5T9S5 1454 aa33.56■■■□□ 2.96
CASC4-204ENST00000557945 LRRIQ1Q96JM4 1722 aa33.54■■■□□ 2.96
CASC4-204ENST00000557945 PLEKHD1A6NEE1 506 aa33.52■■■□□ 2.96
CASC4-204ENST00000557945 WDR7Q9Y4E6 1490 aa33.5■■■□□ 2.95
CASC4-204ENST00000557945 CDK11AQ9UQ88 783 aaPredicted RBP33.5■■■□□ 2.95
CASC4-204ENST00000557945 TRHP20396 242 aaPredicted RBP33.47■■■□□ 2.95
CASC4-204ENST00000557945 KCNH8Q96L42 1107 aa33.47■■■□□ 2.95
CASC4-204ENST00000557945 APLP2Q06481 763 aa33.43■■■□□ 2.94
CASC4-204ENST00000557945 ABCC10Q5T3U5 1492 aa33.42■■■□□ 2.94
CASC4-204ENST00000557945 FAM69CQ0P6D2 419 aa33.41■■■□□ 2.94
CASC4-204ENST00000557945 DIP2BQ9P265 1576 aa33.37■■■□□ 2.93
CASC4-204ENST00000557945 TROQ12816 1431 aaPredicted RBP33.35■■■□□ 2.93
CASC4-204ENST00000557945 TIAM1Q13009 1591 aa33.35■■■□□ 2.93
CASC4-204ENST00000557945 CFAP43Q8NDM7 1665 aa33.34■■■□□ 2.93
CASC4-204ENST00000557945 MTUS2Q5JR59 1369 aa33.33■■■□□ 2.93
CASC4-204ENST00000557945 MAGI3Q5TCQ9 1506 aa33.32■■■□□ 2.92
CASC4-204ENST00000557945 MAP3K1Q13233 1512 aa33.31■■■□□ 2.92
CASC4-204ENST00000557945 KIF13AQ9H1H9 1805 aa33.28■■■□□ 2.92
CASC4-204ENST00000557945 GLI2P10070 1586 aa33.27■■■□□ 2.92
CASC4-204ENST00000557945 KANK4Q5T7N3 995 aaPredicted RBP33.23■■■□□ 2.91
CASC4-204ENST00000557945 KIF14Q15058 1648 aa33.22■■■□□ 2.91
CASC4-204ENST00000557945 EHBP1L1Q8N3D4 1523 aa33.22■■■□□ 2.91
CASC4-204ENST00000557945 LRRC9Q6ZRR7 1453 aa33.22■■■□□ 2.91
CASC4-204ENST00000557945 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.18■■■□□ 2.96e-7■■□□□ 12.8
CASC4-204ENST00000557945 ABCA9Q8IUA7 1624 aa33.17■■■□□ 2.9
CASC4-204ENST00000557945 CD109Q6YHK3 1445 aa33.16■■■□□ 2.9
CASC4-204ENST00000557945 TTC37Q6PGP7 1564 aa33.13■■■□□ 2.89
CASC4-204ENST00000557945 MAP3K4Q9Y6R4 1608 aa33.13■■■□□ 2.89
CASC4-204ENST00000557945 TSPOAP1O95153 1857 aa33.1■■■□□ 2.89
CASC4-204ENST00000557945 SUPT6HQ7KZ85 1726 aaKnown RBP33.07■■■□□ 2.88
CASC4-204ENST00000557945 PPARGC1BQ86YN6 1023 aaKnown RBP33.07■■■□□ 2.88
CASC4-204ENST00000557945 NCOA2Q15596 1464 aa33.05■■■□□ 2.88
CASC4-204ENST00000557945 CCNB3Q8WWL7 1395 aa33.03■■■□□ 2.88
CASC4-204ENST00000557945 PLCH2O75038 1416 aa33■■■□□ 2.87
CASC4-204ENST00000557945 MYO5CQ9NQX4 1742 aa32.99■■■□□ 2.87
CASC4-204ENST00000557945 TEX14Q8IWB6 1497 aa32.99■■■□□ 2.87
CASC4-204ENST00000557945 PPRC1Q5VV67 1664 aaKnown RBP32.98■■■□□ 2.87
CASC4-204ENST00000557945 GPATCH8Q9UKJ3 1502 aaKnown RBP32.96■■■□□ 2.87
CASC4-204ENST00000557945 ARHGAP5Q13017 1502 aa32.94■■■□□ 2.86
CASC4-204ENST00000557945 EFCAB2Q5VUJ9 269 aa32.93■■■□□ 2.86
CASC4-204ENST00000557945 CDC42BPAQ5VT25 1732 aa32.93■■■□□ 2.86
CASC4-204ENST00000557945 FANCAO15360 1455 aa32.92■■■□□ 2.86
CASC4-204ENST00000557945 CFDP1Q9UEE9 299 aaPredicted RBP32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms