RNA–Protein interactions for RNA: ENST00000557769.5

CCDC85C-207, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 2 BASIC

Gene CCDC85C, Length 3,793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-207ENST00000557769 NEFLP07196 543 aa15.85■□□□□ 0.13
CCDC85C-207ENST00000557769 TDRD9Q8NDG6 1382 aaKnown RBP15.84■□□□□ 0.13
CCDC85C-207ENST00000557769 GAPVD1Q14C86 1478 aa15.82■□□□□ 0.12
CCDC85C-207ENST00000557769 ATP1B4Q9UN42 357 aaPredicted RBP15.82■□□□□ 0.12
CCDC85C-207ENST00000557769 ERICH3Q5RHP9 1530 aa15.8■□□□□ 0.12
CCDC85C-207ENST00000557769 KIF27Q86VH2 1401 aa15.77■□□□□ 0.11
CCDC85C-207ENST00000557769 GRIN2BQ13224 1484 aa15.77■□□□□ 0.11
CCDC85C-207ENST00000557769 ADAMTS12P58397 1594 aa15.76■□□□□ 0.11
CCDC85C-207ENST00000557769 IGF1RP08069 1367 aa15.75■□□□□ 0.11
CCDC85C-207ENST00000557769 CUL7Q14999 1698 aa15.73■□□□□ 0.11
CCDC85C-207ENST00000557769 SNAPC4Q5SXM2 1469 aa15.73■□□□□ 0.11
CCDC85C-207ENST00000557769 CNGB1Q14028 1251 aaPredicted RBP15.72■□□□□ 0.11
CCDC85C-207ENST00000557769 FKBP8Q14318 412 aa15.72■□□□□ 0.11
CCDC85C-207ENST00000557769 MAGI1Q96QZ7 1491 aaPredicted RBP15.72■□□□□ 0.11
CCDC85C-207ENST00000557769 CHD1O14646 1710 aa15.71■□□□□ 0.11
CCDC85C-207ENST00000557769 EEA1Q15075 1411 aa15.69■□□□□ 0.1
CCDC85C-207ENST00000557769 PRXQ9BXM0 1461 aa15.68■□□□□ 0.1
CCDC85C-207ENST00000557769 CSRNP3Q8WYN3 585 aa15.68■□□□□ 0.1
CCDC85C-207ENST00000557769 SUPT16HQ9Y5B9 1047 aaKnown RBP15.68■□□□□ 0.1
CCDC85C-207ENST00000557769 SYNJ2O15056 1496 aa15.65■□□□□ 0.1
CCDC85C-207ENST00000557769 HIRIP3Q9BW71 556 aaPredicted RBP15.64■□□□□ 0.09
CCDC85C-207ENST00000557769 KIF21BO75037 1637 aa15.64■□□□□ 0.09
CCDC85C-207ENST00000557769 FHAD1B1AJZ9 1412 aa15.64■□□□□ 0.09
CCDC85C-207ENST00000557769 TRIM52Q96A61 297 aa15.62■□□□□ 0.09
CCDC85C-207ENST00000557769 ANP32EQ9BTT0 268 aa15.61■□□□□ 0.09
CCDC85C-207ENST00000557769 GRIN2AQ12879 1464 aa15.6■□□□□ 0.09
CCDC85C-207ENST00000557769 CEP170Q5SW79 1584 aa15.6■□□□□ 0.09
CCDC85C-207ENST00000557769 BCL11AQ9H165 835 aa15.6■□□□□ 0.09
CCDC85C-207ENST00000557769 CARMIL1Q5VZK9 1371 aa15.59■□□□□ 0.09
CCDC85C-207ENST00000557769 DDX10Q13206 875 aaKnown RBP15.59■□□□□ 0.09
CCDC85C-207ENST00000557769 RAPGEF2Q9Y4G8 1499 aa15.58■□□□□ 0.08
CCDC85C-207ENST00000557769 CEP162Q5TB80 1403 aa15.57■□□□□ 0.08
CCDC85C-207ENST00000557769 IRX6P78412 446 aaPredicted RBP15.56■□□□□ 0.08
CCDC85C-207ENST00000557769 NUP160Q12769 1436 aa15.55■□□□□ 0.08
CCDC85C-207ENST00000557769 CLASP1Q7Z460 1538 aa15.55■□□□□ 0.08
CCDC85C-207ENST00000557769 TSHZ2Q9NRE2 1034 aa15.54■□□□□ 0.08
CCDC85C-207ENST00000557769 CTTNBP2Q8WZ74 1663 aa15.54■□□□□ 0.08
CCDC85C-207ENST00000557769 KCNH8Q96L42 1107 aa15.53■□□□□ 0.08
CCDC85C-207ENST00000557769 SHROOM2Q13796 1616 aa15.49■□□□□ 0.07
CCDC85C-207ENST00000557769 FAM50AQ14320 339 aaKnown RBP15.48■□□□□ 0.07
CCDC85C-207ENST00000557769 GOLGA3Q08378 1498 aa15.46■□□□□ 0.06
CCDC85C-207ENST00000557769 CHMP7Q8WUX9 453 aaPredicted RBP15.45■□□□□ 0.06
CCDC85C-207ENST00000557769 POLR3GLQ9BT43 218 aa15.43■□□□□ 0.06
CCDC85C-207ENST00000557769 KIAA0586Q9BVV6 1533 aa15.43■□□□□ 0.06
CCDC85C-207ENST00000557769 IQGAP2Q13576 1575 aa15.42■□□□□ 0.06
CCDC85C-207ENST00000557769 FBLN2P98095 1184 aa15.4■□□□□ 0.06
CCDC85C-207ENST00000557769 ANP32CO43423 234 aa15.38■□□□□ 0.05
CCDC85C-207ENST00000557769 UGGT2Q9NYU1 1516 aa15.38■□□□□ 0.05
CCDC85C-207ENST00000557769 ERCC6L2Q5T890 1561 aa15.38■□□□□ 0.05
CCDC85C-207ENST00000557769 SAMD9Q5K651 1589 aa15.37■□□□□ 0.05
CCDC85C-207ENST00000557769 CDK11AQ9UQ88 783 aaPredicted RBP15.36■□□□□ 0.05
CCDC85C-207ENST00000557769 SENP3-EIF4A1A0A087X0R7 540 aa15.36■□□□□ 0.05
CCDC85C-207ENST00000557769 OSCARQ8IYS5 282 aa15.36■□□□□ 0.05
CCDC85C-207ENST00000557769 NBR1Q14596 966 aa15.35■□□□□ 0.05
CCDC85C-207ENST00000557769 DISP1Q96F81 1524 aa15.35■□□□□ 0.05
CCDC85C-207ENST00000557769 RBM19Q9Y4C8 960 aaKnown RBP15.33■□□□□ 0.05
CCDC85C-207ENST00000557769 P3H3Q8IVL6 736 aa15.33■□□□□ 0.04
CCDC85C-207ENST00000557769 TNIKQ9UKE5 1360 aa15.33■□□□□ 0.04
CCDC85C-207ENST00000557769 HNRNPUQ00839 825 aaKnown RBP eCLIP15.32■□□□□ 0.04
CCDC85C-207ENST00000557769 KIAA0556O60303 1618 aa15.31■□□□□ 0.04
CCDC85C-207ENST00000557769 CLIP1P30622 1438 aa15.3■□□□□ 0.04
CCDC85C-207ENST00000557769 SIN3AQ96ST3 1273 aa15.29■□□□□ 0.04
CCDC85C-207ENST00000557769 CLSPNQ9HAW4 1339 aa15.29■□□□□ 0.04
CCDC85C-207ENST00000557769 RIMBP3CA6NJZ7 1639 aa15.29■□□□□ 0.04
CCDC85C-207ENST00000557769 RIMBP3BA6NNM3 1639 aa15.29■□□□□ 0.04
CCDC85C-207ENST00000557769 RIMBP3Q9UFD9 1639 aa15.29■□□□□ 0.04
CCDC85C-207ENST00000557769 ARHGEF11O15085 1522 aa15.27■□□□□ 0.03
CCDC85C-207ENST00000557769 ARHGAP35Q9NRY4 1499 aa15.26■□□□□ 0.03
CCDC85C-207ENST00000557769 JPH4Q96JJ6 628 aa15.26■□□□□ 0.03
CCDC85C-207ENST00000557769 PRG4Q92954 1404 aaPredicted RBP15.25■□□□□ 0.03
CCDC85C-207ENST00000557769 EFCAB5A4FU69 1503 aa15.25■□□□□ 0.03
CCDC85C-207ENST00000557769 ARAP1Q96P48 1450 aa15.21■□□□□ 0.03
CCDC85C-207ENST00000557769 KANK4Q5T7N3 995 aaPredicted RBP15.21■□□□□ 0.03
CCDC85C-207ENST00000557769 FAM9BQ8IZU0 186 aa15.2■□□□□ 0.02
CCDC85C-207ENST00000557769 RTL5Q5HYW3 569 aaPredicted RBP15.19■□□□□ 0.02
CCDC85C-207ENST00000557769 NPM2Q86SE8 214 aaKnown RBP15.18■□□□□ 0.02
CCDC85C-207ENST00000557769 LRRIQ1Q96JM4 1722 aa15.17■□□□□ 0.02
CCDC85C-207ENST00000557769 DNAJC5Q9H3Z4 198 aa15.16■□□□□ 0.02
CCDC85C-207ENST00000557769 FHOD3Q2V2M9 1422 aa15.15■□□□□ 0.02
CCDC85C-207ENST00000557769 ABCA8O94911 1581 aa15.14■□□□□ 0.01
CCDC85C-207ENST00000557769 CARMIL2Q6F5E8 1435 aa15.13■□□□□ 0.01
CCDC85C-207ENST00000557769 RTN4Q9NQC3 1192 aaKnown RBP15.13■□□□□ 0.01
CCDC85C-207ENST00000557769 ADCY10Q96PN6 1610 aa15.13■□□□□ 0.01
CCDC85C-207ENST00000557769 B4GALNT3Q6L9W6 998 aa15.1■□□□□ 0.01
CCDC85C-207ENST00000557769 PCF11O94913 1555 aaKnown RBP15.09■□□□□ 0.01
CCDC85C-207ENST00000557769 RAPGEF6Q8TEU7 1601 aa15.09■□□□□ 0.01
CCDC85C-207ENST00000557769 PLB1Q6P1J6 1458 aa15.08■□□□□ 0
CCDC85C-207ENST00000557769 ZNF326Q5BKZ1 582 aaKnown RBP15.07■□□□□ 0
CCDC85C-207ENST00000557769 ARID3CA6NKF2 412 aa15.07■□□□□ 0
CCDC85C-207ENST00000557769 UHRF1BP1LA0JNW5 1464 aa15.06■□□□□ 0
CCDC85C-207ENST00000557769 PTPRGP23470 1445 aa15.06■□□□□ 0
CCDC85C-207ENST00000557769 DHX57Q6P158 1386 aaKnown RBP15.05■□□□□ 0
CCDC85C-207ENST00000557769 ABCC2Q92887 1545 aa15.05■□□□□ 0
CCDC85C-207ENST00000557769 SALL2Q9Y467 1007 aaPredicted RBP15.05■□□□□ -0
CCDC85C-207ENST00000557769 DEKP35659 375 aaKnown RBP15.04■□□□□ -0
CCDC85C-207ENST00000557769 NUP153P49790 1475 aaKnown RBP15.04■□□□□ -0
CCDC85C-207ENST00000557769 FMN1Q68DA7 1419 aa15.02□□□□□ -0.01
CCDC85C-207ENST00000557769 UACAQ9BZF9 1416 aa15.02□□□□□ -0.01
CCDC85C-207ENST00000557769 TONSLQ96HA7 1378 aa15.02□□□□□ -0.01
CCDC85C-207ENST00000557769 ZCCHC11Q5TAX3 1644 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms