RNA–Protein interactions for RNA: ENST00000556953.1

NGDN-212, Transcript of neuroguidin, humanhuman

TSL 2

Gene NGDN, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGDN-212ENST00000556953 FOXD1Q16676 465 aa20.2■□□□□ 0.82
NGDN-212ENST00000556953 CARMIL1Q5VZK9 1371 aa20.16■□□□□ 0.82
NGDN-212ENST00000556953 SHROOM2Q13796 1616 aa20.15■□□□□ 0.82
NGDN-212ENST00000556953 RUSC2Q8N2Y8 1516 aa20.12■□□□□ 0.81
NGDN-212ENST00000556953 JPH4Q96JJ6 628 aa20.1■□□□□ 0.81
NGDN-212ENST00000556953 KIAA0586Q9BVV6 1533 aa20.08■□□□□ 0.81
NGDN-212ENST00000556953 ERCC6L2Q5T890 1561 aa20.08■□□□□ 0.8
NGDN-212ENST00000556953 PRG4Q92954 1404 aaPredicted RBP20.06■□□□□ 0.8
NGDN-212ENST00000556953 RAPGEF2Q9Y4G8 1499 aa20.03■□□□□ 0.8
NGDN-212ENST00000556953 IQGAP2Q13576 1575 aa19.95■□□□□ 0.78
NGDN-212ENST00000556953 PRXQ9BXM0 1461 aa19.92■□□□□ 0.78
NGDN-212ENST00000556953 EEA1Q15075 1411 aa19.91■□□□□ 0.78
NGDN-212ENST00000556953 CARMIL2Q6F5E8 1435 aa19.89■□□□□ 0.77
NGDN-212ENST00000556953 TRHP20396 242 aaPredicted RBP19.88■□□□□ 0.77
NGDN-212ENST00000556953 CSRNP3Q8WYN3 585 aa19.88■□□□□ 0.77
NGDN-212ENST00000556953 UGGT2Q9NYU1 1516 aa19.84■□□□□ 0.77
NGDN-212ENST00000556953 TNIKQ9UKE5 1360 aa19.83■□□□□ 0.76
NGDN-212ENST00000556953 CTTNBP2Q8WZ74 1663 aa19.82■□□□□ 0.76
NGDN-212ENST00000556953 PTPRGP23470 1445 aa19.82■□□□□ 0.76
NGDN-212ENST00000556953 DISP1Q96F81 1524 aa19.8■□□□□ 0.76
NGDN-212ENST00000556953 NPM1P06748 294 aaKnown RBP eCLIP19.77■□□□□ 0.76
NGDN-212ENST00000556953 ADCY10Q96PN6 1610 aa19.76■□□□□ 0.75
NGDN-212ENST00000556953 KIAA0556O60303 1618 aa19.74■□□□□ 0.75
NGDN-212ENST00000556953 FAM9AQ8IZU1 332 aaPredicted RBP19.74■□□□□ 0.75
NGDN-212ENST00000556953 TTBK1Q5TCY1 1321 aaPredicted RBP19.74■□□□□ 0.75
NGDN-212ENST00000556953 GOLGA3Q08378 1498 aa19.73■□□□□ 0.75
NGDN-212ENST00000556953 MAPKBP1O60336 1514 aa19.69■□□□□ 0.74
NGDN-212ENST00000556953 KIF21BO75037 1637 aa19.68■□□□□ 0.74
NGDN-212ENST00000556953 UACAQ9BZF9 1416 aa19.68■□□□□ 0.74
NGDN-212ENST00000556953 UHRF1BP1LA0JNW5 1464 aa19.67■□□□□ 0.74
NGDN-212ENST00000556953 ABCC2Q92887 1545 aa19.66■□□□□ 0.74
NGDN-212ENST00000556953 ABCC10Q5T3U5 1492 aa19.6■□□□□ 0.73
NGDN-212ENST00000556953 KIF13AQ9H1H9 1805 aa19.58■□□□□ 0.73
NGDN-212ENST00000556953 KDM5BQ9UGL1 1544 aa19.57■□□□□ 0.72
NGDN-212ENST00000556953 FAM69CQ0P6D2 419 aa19.57■□□□□ 0.72
NGDN-212ENST00000556953 SAMD9Q5K651 1589 aa19.57■□□□□ 0.72
NGDN-212ENST00000556953 PLB1Q6P1J6 1458 aa19.56■□□□□ 0.72
NGDN-212ENST00000556953 DIP2BQ9P265 1576 aa19.56■□□□□ 0.72
NGDN-212ENST00000556953 ABCA8O94911 1581 aa19.54■□□□□ 0.72
NGDN-212ENST00000556953 P3H3Q8IVL6 736 aa19.54■□□□□ 0.72
NGDN-212ENST00000556953 ASXL2Q76L83 1435 aa19.53■□□□□ 0.72
NGDN-212ENST00000556953 UBTFP17480 764 aaKnown RBP19.52■□□□□ 0.72
NGDN-212ENST00000556953 ZCCHC11Q5TAX3 1644 aaKnown RBP19.51■□□□□ 0.71
NGDN-212ENST00000556953 RANGAP1P46060 587 aaPredicted RBP19.49■□□□□ 0.71
NGDN-212ENST00000556953 EFCAB5A4FU69 1503 aa19.49■□□□□ 0.71
NGDN-212ENST00000556953 EHMT2Q96KQ7 1210 aa19.48■□□□□ 0.71
NGDN-212ENST00000556953 GLI2P10070 1586 aa19.44■□□□□ 0.7
NGDN-212ENST00000556953 FHOD3Q2V2M9 1422 aa19.44■□□□□ 0.7
NGDN-212ENST00000556953 WDR7Q9Y4E6 1490 aa19.42■□□□□ 0.7
NGDN-212ENST00000556953 EPRSP07814 1512 aaKnown RBP19.42■□□□□ 0.7
NGDN-212ENST00000556953 RAPGEF6Q8TEU7 1601 aa19.41■□□□□ 0.7
NGDN-212ENST00000556953 ATP10BO94823 1461 aa19.38■□□□□ 0.69
NGDN-212ENST00000556953 TSPOAP1O95153 1857 aa19.37■□□□□ 0.69
NGDN-212ENST00000556953 ARID3CA6NKF2 412 aa19.35■□□□□ 0.69
NGDN-212ENST00000556953 NUP153P49790 1475 aaKnown RBP19.34■□□□□ 0.69
NGDN-212ENST00000556953 ARHGAP35Q9NRY4 1499 aa19.34■□□□□ 0.69
NGDN-212ENST00000556953 MAP3K4Q9Y6R4 1608 aa19.33■□□□□ 0.69
NGDN-212ENST00000556953 FMN1Q68DA7 1419 aa19.32■□□□□ 0.68
NGDN-212ENST00000556953 KCNH8Q96L42 1107 aa19.31■□□□□ 0.68
NGDN-212ENST00000556953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.3■□□□□ 0.68
NGDN-212ENST00000556953 HNRNPUL2Q1KMD3 747 aaKnown RBP19.3■□□□□ 0.68
NGDN-212ENST00000556953 PPRC1Q5VV67 1664 aaKnown RBP19.3■□□□□ 0.68
NGDN-212ENST00000556953 TEX14Q8IWB6 1497 aa19.29■□□□□ 0.68
NGDN-212ENST00000556953 KDM6BO15054 1643 aa19.29■□□□□ 0.68
NGDN-212ENST00000556953 CFAP43Q8NDM7 1665 aa19.27■□□□□ 0.68
NGDN-212ENST00000556953 CD109Q6YHK3 1445 aa19.26■□□□□ 0.67
NGDN-212ENST00000556953 MAGI3Q5TCQ9 1506 aa19.24■□□□□ 0.67
NGDN-212ENST00000556953 PLEKHD1A6NEE1 506 aa19.23■□□□□ 0.67
NGDN-212ENST00000556953 HECW1Q76N89 1606 aa19.22■□□□□ 0.67
NGDN-212ENST00000556953 ATP1B4Q9UN42 357 aaPredicted RBP19.2■□□□□ 0.66
NGDN-212ENST00000556953 ABCA9Q8IUA7 1624 aa19.2■□□□□ 0.66
NGDN-212ENST00000556953 CLIP1P30622 1438 aa19.19■□□□□ 0.66
NGDN-212ENST00000556953 CDK13Q14004 1512 aaKnown RBP19.18■□□□□ 0.66
NGDN-212ENST00000556953 CDK11AQ9UQ88 783 aaPredicted RBP19.14■□□□□ 0.65
NGDN-212ENST00000556953 CASKIN1Q8WXD9 1431 aa19.13■□□□□ 0.65
NGDN-212ENST00000556953 COL17A1Q9UMD9 1497 aaPredicted RBP19.13■□□□□ 0.65
NGDN-212ENST00000556953 PLPPR3Q6T4P5 718 aa19.12■□□□□ 0.65
NGDN-212ENST00000556953 PHLDB1Q86UU1 1377 aa19.11■□□□□ 0.65
NGDN-212ENST00000556953 PCF11O94913 1555 aaKnown RBP19.1■□□□□ 0.65
NGDN-212ENST00000556953 MSH5O43196 834 aa19.09■□□□□ 0.65
NGDN-212ENST00000556953 CCDC18Q5T9S5 1454 aa19.09■□□□□ 0.65
NGDN-212ENST00000556953 FYCO1Q9BQS8 1478 aa19.09■□□□□ 0.65
NGDN-212ENST00000556953 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.08■□□□□ 0.64
NGDN-212ENST00000556953 NEO1Q92859 1461 aa19.08■□□□□ 0.64
NGDN-212ENST00000556953 CEP162Q5TB80 1403 aa19.08■□□□□ 0.64
NGDN-212ENST00000556953 ARAP3Q8WWN8 1544 aa19.07■□□□□ 0.64
NGDN-212ENST00000556953 LRRIQ1Q96JM4 1722 aa19.05■□□□□ 0.64
NGDN-212ENST00000556953 TROQ12816 1431 aaPredicted RBP19.05■□□□□ 0.64
NGDN-212ENST00000556953 TTC37Q6PGP7 1564 aa19.04■□□□□ 0.64
NGDN-212ENST00000556953 LOC105371045A0A1W2PR82 267 aa19.02■□□□□ 0.64
NGDN-212ENST00000556953 KIF14Q15058 1648 aa19.02■□□□□ 0.64
NGDN-212ENST00000556953 CFAP74Q9C0B2 1584 aa19.02■□□□□ 0.63
NGDN-212ENST00000556953 FANCAO15360 1455 aa19.01■□□□□ 0.63
NGDN-212ENST00000556953 PLCH2O75038 1416 aa18.99■□□□□ 0.63
NGDN-212ENST00000556953 AKNAQ7Z591 1439 aa18.97■□□□□ 0.63
NGDN-212ENST00000556953 MYO5CQ9NQX4 1742 aa18.95■□□□□ 0.62
NGDN-212ENST00000556953 RAPGEF3O95398 923 aa18.94■□□□□ 0.62
NGDN-212ENST00000556953 DENND4BO75064 1496 aaPredicted RBP18.93■□□□□ 0.62
NGDN-212ENST00000556953 EFCAB2Q5VUJ9 269 aa18.93■□□□□ 0.62
NGDN-212ENST00000556953 PIAS4Q8N2W9 510 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms