RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 KIAA0586Q9BVV6 1533 aa41.13■■■■■ 4.17
SDR39U1-221ENST00000556707 PRXQ9BXM0 1461 aa41.1■■■■■ 4.17
SDR39U1-221ENST00000556707 ARAP1Q96P48 1450 aa41.09■■■■■ 4.17
SDR39U1-221ENST00000556707 CSRNP3Q8WYN3 585 aa41.08■■■■■ 4.17
SDR39U1-221ENST00000556707 JPH4Q96JJ6 628 aa41.05■■■■■ 4.16
SDR39U1-221ENST00000556707 ERCC6L2Q5T890 1561 aa41.02■■■■■ 4.16
SDR39U1-221ENST00000556707 CYB5RLQ6IPT4 315 aa40.99■■■■■ 4.15
SDR39U1-221ENST00000556707 PRG4Q92954 1404 aaPredicted RBP40.96■■■■■ 4.15
SDR39U1-221ENST00000556707 FAM9AQ8IZU1 332 aaPredicted RBP40.95■■■■■ 4.15
SDR39U1-221ENST00000556707 IQGAP2Q13576 1575 aa40.93■■■■■ 4.14
SDR39U1-221ENST00000556707 CTTNBP2Q8WZ74 1663 aa40.88■■■■■ 4.13
SDR39U1-221ENST00000556707 KIF21BO75037 1637 aa40.75■■■■■ 4.11
SDR39U1-221ENST00000556707 UGGT2Q9NYU1 1516 aa40.71■■■■■ 4.11
SDR39U1-221ENST00000556707 CARMIL2Q6F5E8 1435 aa40.67■■■■■ 4.1
SDR39U1-221ENST00000556707 DISP1Q96F81 1524 aa40.62■■■■■ 4.09
SDR39U1-221ENST00000556707 KIAA0556O60303 1618 aa40.53■■■■■ 4.08
SDR39U1-221ENST00000556707 TNIKQ9UKE5 1360 aa40.53■■■■■ 4.08
SDR39U1-221ENST00000556707 GOLGA3Q08378 1498 aa40.49■■■■■ 4.07
SDR39U1-221ENST00000556707 PTPRGP23470 1445 aa40.49■■■■■ 4.07
SDR39U1-221ENST00000556707 EHMT2Q96KQ7 1210 aa40.4■■■■■ 4.06
SDR39U1-221ENST00000556707 TTBK1Q5TCY1 1321 aaPredicted RBP40.38■■■■■ 4.05
SDR39U1-221ENST00000556707 UBTFP17480 764 aaKnown RBP40.36■■■■■ 4.05
SDR39U1-221ENST00000556707 ADCY10Q96PN6 1610 aa40.35■■■■■ 4.05
SDR39U1-221ENST00000556707 SAMD9Q5K651 1589 aa40.32■■■■■ 4.05
SDR39U1-221ENST00000556707 UACAQ9BZF9 1416 aa40.23■■■■■ 4.03
SDR39U1-221ENST00000556707 RANGAP1P46060 587 aaPredicted RBP40.21■■■■■ 4.03
SDR39U1-221ENST00000556707 UHRF1BP1LA0JNW5 1464 aa40.2■■■■■ 4.03
SDR39U1-221ENST00000556707 P3H3Q8IVL6 736 aa40.2■■■■■ 4.03
SDR39U1-221ENST00000556707 NPM1P06748 294 aaKnown RBP eCLIP40.18■■■■■ 4.02
SDR39U1-221ENST00000556707 ABCC2Q92887 1545 aa40.17■■■■■ 4.02
SDR39U1-221ENST00000556707 EFCAB5A4FU69 1503 aa40.16■■■■■ 4.02
SDR39U1-221ENST00000556707 TRHP20396 242 aaPredicted RBP40.1■■■■■ 4.01
SDR39U1-221ENST00000556707 PLB1Q6P1J6 1458 aa40.1■■■■■ 4.01
SDR39U1-221ENST00000556707 ABCA8O94911 1581 aa40.09■■■■■ 4.01
SDR39U1-221ENST00000556707 MAPKBP1O60336 1514 aa40.06■■■■■ 4
SDR39U1-221ENST00000556707 FHOD3Q2V2M9 1422 aa40.06■■■■■ 4
SDR39U1-221ENST00000556707 KDM5BQ9UGL1 1544 aa40.01■■■■□ 3.99
SDR39U1-221ENST00000556707 ARHGAP35Q9NRY4 1499 aa39.96■■■■□ 3.99
SDR39U1-221ENST00000556707 ZCCHC11Q5TAX3 1644 aaKnown RBP39.94■■■■□ 3.99
SDR39U1-221ENST00000556707 RAPGEF6Q8TEU7 1601 aa39.91■■■■□ 3.98
SDR39U1-221ENST00000556707 KIF13AQ9H1H9 1805 aa39.9■■■■□ 3.98
SDR39U1-221ENST00000556707 ABCC10Q5T3U5 1492 aa39.85■■■■□ 3.97
SDR39U1-221ENST00000556707 ASXL2Q76L83 1435 aa39.84■■■■□ 3.97
SDR39U1-221ENST00000556707 DIP2BQ9P265 1576 aa39.8■■■■□ 3.96
SDR39U1-221ENST00000556707 FMN1Q68DA7 1419 aa39.77■■■■□ 3.96
SDR39U1-221ENST00000556707 CLIP1P30622 1438 aa39.76■■■■□ 3.96
SDR39U1-221ENST00000556707 LOC105371045A0A1W2PR82 267 aa39.75■■■■□ 3.95
SDR39U1-221ENST00000556707 ATP10BO94823 1461 aa39.75■■■■□ 3.95
SDR39U1-221ENST00000556707 FAM69CQ0P6D2 419 aa39.74■■■■□ 3.95
SDR39U1-221ENST00000556707 NUP153P49790 1475 aaKnown RBP39.74■■■■□ 3.95
SDR39U1-221ENST00000556707 ARID3CA6NKF2 412 aa39.7■■■■□ 3.95
SDR39U1-221ENST00000556707 WDR7Q9Y4E6 1490 aa39.67■■■■□ 3.94
SDR39U1-221ENST00000556707 EPRSP07814 1512 aaKnown RBP39.62■■■■□ 3.93
SDR39U1-221ENST00000556707 CEP162Q5TB80 1403 aa39.62■■■■□ 3.93
SDR39U1-221ENST00000556707 GLI2P10070 1586 aa39.62■■■■□ 3.93
SDR39U1-221ENST00000556707 HECW1Q76N89 1606 aa39.58■■■■□ 3.93
SDR39U1-221ENST00000556707 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.55■■■■□ 3.92
SDR39U1-221ENST00000556707 HNRNPUL2Q1KMD3 747 aaKnown RBP39.55■■■■□ 3.92
SDR39U1-221ENST00000556707 TSPOAP1O95153 1857 aa39.54■■■■□ 3.92
SDR39U1-221ENST00000556707 ATP1B4Q9UN42 357 aaPredicted RBP39.49■■■■□ 3.91
SDR39U1-221ENST00000556707 PCF11O94913 1555 aaKnown RBP39.48■■■■□ 3.91
SDR39U1-221ENST00000556707 CDK13Q14004 1512 aaKnown RBP39.48■■■■□ 3.91
SDR39U1-221ENST00000556707 CASKIN1Q8WXD9 1431 aa39.48■■■■□ 3.91
SDR39U1-221ENST00000556707 KCNH8Q96L42 1107 aa39.47■■■■□ 3.91
SDR39U1-221ENST00000556707 MAP3K4Q9Y6R4 1608 aa39.46■■■■□ 3.91
SDR39U1-221ENST00000556707 LRRIQ1Q96JM4 1722 aa39.44■■■■□ 3.9
SDR39U1-221ENST00000556707 PLEKHD1A6NEE1 506 aa39.4■■■■□ 3.9
SDR39U1-221ENST00000556707 FYCO1Q9BQS8 1478 aa39.4■■■■□ 3.9
SDR39U1-221ENST00000556707 PPRC1Q5VV67 1664 aaKnown RBP39.38■■■■□ 3.9
SDR39U1-221ENST00000556707 CFAP43Q8NDM7 1665 aa39.38■■■■□ 3.9
SDR39U1-221ENST00000556707 CCDC18Q5T9S5 1454 aa39.31■■■■□ 3.88
SDR39U1-221ENST00000556707 ABCA9Q8IUA7 1624 aa39.3■■■■□ 3.88
SDR39U1-221ENST00000556707 CD109Q6YHK3 1445 aa39.29■■■■□ 3.88
SDR39U1-221ENST00000556707 CDK11AQ9UQ88 783 aaPredicted RBP39.27■■■■□ 3.88
SDR39U1-221ENST00000556707 TEX14Q8IWB6 1497 aa39.24■■■■□ 3.87
SDR39U1-221ENST00000556707 MAGI3Q5TCQ9 1506 aa39.22■■■■□ 3.87
SDR39U1-221ENST00000556707 TROQ12816 1431 aaPredicted RBP39.17■■■■□ 3.86
SDR39U1-221ENST00000556707 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.15■■■■□ 3.86
SDR39U1-221ENST00000556707 VPS8Q8N3P4 1428 aa39.14■■■■□ 3.86
SDR39U1-221ENST00000556707 KDM6BO15054 1643 aa39.13■■■■□ 3.85
SDR39U1-221ENST00000556707 TTC37Q6PGP7 1564 aa39.11■■■■□ 3.85
SDR39U1-221ENST00000556707 KIF14Q15058 1648 aa39.08■■■■□ 3.85
SDR39U1-221ENST00000556707 COL17A1Q9UMD9 1497 aaPredicted RBP38.97■■■■□ 3.83
SDR39U1-221ENST00000556707 MYO5CQ9NQX4 1742 aa38.96■■■■□ 3.83
SDR39U1-221ENST00000556707 NEO1Q92859 1461 aa38.95■■■■□ 3.83
SDR39U1-221ENST00000556707 PHLDB1Q86UU1 1377 aa38.94■■■■□ 3.82
SDR39U1-221ENST00000556707 PLCH2O75038 1416 aa38.91■■■■□ 3.82
SDR39U1-221ENST00000556707 MTUS2Q5JR59 1369 aa38.91■■■■□ 3.82
SDR39U1-221ENST00000556707 CFAP74Q9C0B2 1584 aa38.9■■■■□ 3.82
SDR39U1-221ENST00000556707 TIAM1Q13009 1591 aa38.89■■■■□ 3.82
SDR39U1-221ENST00000556707 ARAP3Q8WWN8 1544 aa38.89■■■■□ 3.82
SDR39U1-221ENST00000556707 FANCAO15360 1455 aa38.87■■■■□ 3.81
SDR39U1-221ENST00000556707 EHBP1L1Q8N3D4 1523 aa38.85■■■■□ 3.81
SDR39U1-221ENST00000556707 MAP3K1Q13233 1512 aa38.81■■■■□ 3.8
SDR39U1-221ENST00000556707 AKNAQ7Z591 1439 aa38.8■■■■□ 3.8
SDR39U1-221ENST00000556707 CDC42BPAQ5VT25 1732 aa38.8■■■■□ 3.8
SDR39U1-221ENST00000556707 CDC42BPBQ9Y5S2 1711 aa38.8■■■■□ 3.8
SDR39U1-221ENST00000556707 PREX2Q70Z35 1606 aa38.78■■■■□ 3.8
SDR39U1-221ENST00000556707 EFCAB2Q5VUJ9 269 aa38.76■■■■□ 3.8
SDR39U1-221ENST00000556707 ARHGAP5Q13017 1502 aa38.75■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms