RNA–Protein interactions for RNA: ENST00000556692.1

RDH11-208, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 801 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-208ENST00000556692 FAM163AQ96GL9 167 aaPredicted RBP12.21□□□□□ -0.45
RDH11-208ENST00000556692 MS4A3Q96HJ5 214 aa12.2□□□□□ -0.46
RDH11-208ENST00000556692 ATMINO43313 823 aaPredicted RBP12.19□□□□□ -0.46
RDH11-208ENST00000556692 POTEJP0CG39 1038 aa12.18□□□□□ -0.46
RDH11-208ENST00000556692 SCUBE2Q9NQ36 999 aa12.15□□□□□ -0.46
RDH11-208ENST00000556692 SPDYE4A6NLX3 237 aa12.14□□□□□ -0.47
RDH11-208ENST00000556692 MNX1P50219 401 aaPredicted RBP12.12□□□□□ -0.47
RDH11-208ENST00000556692 LCE2DQ5TA82 110 aaPredicted RBP12.11□□□□□ -0.47
RDH11-208ENST00000556692 ATN1P54259 1190 aaPredicted RBP12.06□□□□□ -0.48
RDH11-208ENST00000556692 TSPYL2Q9H2G4 693 aaPredicted RBP12.05□□□□□ -0.48
RDH11-208ENST00000556692 CDAN1Q8IWY9 1227 aa11.95□□□□□ -0.5
RDH11-208ENST00000556692 CCDC61Q9Y6R9 512 aa11.95□□□□□ -0.5
RDH11-208ENST00000556692 POTEFA5A3E0 1075 aa11.94□□□□□ -0.5
RDH11-208ENST00000556692 BMP2KQ9NSY1 1161 aaPredicted RBP11.94□□□□□ -0.5
RDH11-208ENST00000556692 CSRNP3Q8WYN3 585 aa11.93□□□□□ -0.5
RDH11-208ENST00000556692 KIF12Q96FN5 646 aa11.93□□□□□ -0.5
RDH11-208ENST00000556692 SEC24BO95487 1268 aa11.91□□□□□ -0.5
RDH11-208ENST00000556692 TRPC6Q9Y210 931 aa11.88□□□□□ -0.51
RDH11-208ENST00000556692 TIE1P35590 1138 aa11.86□□□□□ -0.51
RDH11-208ENST00000556692 MAP3K13O43283 966 aa11.85□□□□□ -0.51
RDH11-208ENST00000556692 COLQQ9Y215 455 aaPredicted RBP11.84□□□□□ -0.51
RDH11-208ENST00000556692 TTLL13PA6NNM8 815 aa11.79□□□□□ -0.52
RDH11-208ENST00000556692 SLAIN1Q8ND83 568 aa11.77□□□□□ -0.53
RDH11-208ENST00000556692 ST18O60284 1047 aa11.76□□□□□ -0.53
RDH11-208ENST00000556692 PLEKHG5O94827 1062 aa11.76□□□□□ -0.53
RDH11-208ENST00000556692 IER5LQ5T953 404 aa11.73□□□□□ -0.53
RDH11-208ENST00000556692 TRIM35Q9UPQ4 493 aa11.73□□□□□ -0.53
RDH11-208ENST00000556692 RASEFQ8IZ41 740 aa11.72□□□□□ -0.53
RDH11-208ENST00000556692 MIER1Q8N108 512 aa11.69□□□□□ -0.54
RDH11-208ENST00000556692 MMRN1Q13201 1228 aa11.68□□□□□ -0.54
RDH11-208ENST00000556692 PCDHB13Q9Y5F0 798 aa11.67□□□□□ -0.54
RDH11-208ENST00000556692 SPNS2Q8IVW8 549 aa11.65□□□□□ -0.54
RDH11-208ENST00000556692 PLCG2P16885 1265 aa11.63□□□□□ -0.55
RDH11-208ENST00000556692 PROM2Q8N271 834 aa11.63□□□□□ -0.55
RDH11-208ENST00000556692 SGIP1Q9BQI5 828 aa11.63□□□□□ -0.55
RDH11-208ENST00000556692 TMEM106CQ9BVX2 250 aa11.58□□□□□ -0.56
RDH11-208ENST00000556692 TMEM121BQ9BXQ6 578 aaPredicted RBP11.57□□□□□ -0.56
RDH11-208ENST00000556692 SNPHO15079 494 aa11.56□□□□□ -0.56
RDH11-208ENST00000556692 IFNL1Q8IU54 200 aa11.55□□□□□ -0.56
RDH11-208ENST00000556692 PLCD3Q8N3E9 789 aa11.54□□□□□ -0.56
RDH11-208ENST00000556692 EHMT2Q96KQ7 1210 aa11.54□□□□□ -0.56
RDH11-208ENST00000556692 MARVELD3Q96A59 401 aa11.53□□□□□ -0.56
RDH11-208ENST00000556692 IRX5P78411 483 aaPredicted RBP11.5□□□□□ -0.57
RDH11-208ENST00000556692 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.5□□□□□ -0.57
RDH11-208ENST00000556692 OCEL1Q9H607 264 aa11.47□□□□□ -0.57
RDH11-208ENST00000556692 ZBTB47Q9UFB7 747 aaPredicted RBP11.46□□□□□ -0.57
RDH11-208ENST00000556692 NUBP1P53384 320 aa11.44□□□□□ -0.58
RDH11-208ENST00000556692 FAM212AQ96EL1 285 aa11.44□□□□□ -0.58
RDH11-208ENST00000556692 EMP3P54852 163 aa11.41□□□□□ -0.58
RDH11-208ENST00000556692 C3orf67Q6ZVT6 689 aa11.34□□□□□ -0.59
RDH11-208ENST00000556692 FAM205CA6NFA0 338 aa11.32□□□□□ -0.6
RDH11-208ENST00000556692 HS3ST6Q96QI5 342 aa11.32□□□□□ -0.6
RDH11-208ENST00000556692 KRTAP3-3Q9BYR6 98 aa11.31□□□□□ -0.6
RDH11-208ENST00000556692 KRTAP3-2Q9BYR7 98 aa11.31□□□□□ -0.6
RDH11-208ENST00000556692 PYGBP11216 843 aa11.3□□□□□ -0.6
RDH11-208ENST00000556692 DCAF8Q5TAQ9 597 aa11.3□□□□□ -0.6
RDH11-208ENST00000556692 PCDHB8Q9UN66 801 aa11.29□□□□□ -0.6
RDH11-208ENST00000556692 POTEB3A0JP26 581 aa11.27□□□□□ -0.61
RDH11-208ENST00000556692 POTEBQ6S5H4 581 aa11.27□□□□□ -0.61
RDH11-208ENST00000556692 L3MBTL3Q96JM7 780 aaPredicted RBP11.26□□□□□ -0.61
RDH11-208ENST00000556692 GOLGA2Q08379 1002 aa11.25□□□□□ -0.61
RDH11-208ENST00000556692 PDCD7Q8N8D1 485 aaKnown RBP11.23□□□□□ -0.61
RDH11-208ENST00000556692 MKRN3Q13064 507 aaKnown RBP11.22□□□□□ -0.61
RDH11-208ENST00000556692 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.16□□□□□ -0.62
RDH11-208ENST00000556692 ZNF467Q7Z7K2 595 aaPredicted RBP11.11□□□□□ -0.63
RDH11-208ENST00000556692 RNF166Q96A37 237 aaPredicted RBP11.11□□□□□ -0.63
RDH11-208ENST00000556692 ZNF710Q8N1W2 664 aa11.09□□□□□ -0.63
RDH11-208ENST00000556692 G3V3G9 751 aa11.08□□□□□ -0.64
RDH11-208ENST00000556692 ERBB3P21860 1342 aa11.08□□□□□ -0.64
RDH11-208ENST00000556692 HOXB3P14651 431 aaPredicted RBP11.04□□□□□ -0.64
RDH11-208ENST00000556692 PSEN1P49768 467 aa11.04□□□□□ -0.64
RDH11-208ENST00000556692 HOXB1P14653 301 aaPredicted RBP11.03□□□□□ -0.64
RDH11-208ENST00000556692 DPY19L2Q6NUT2 758 aa11.03□□□□□ -0.64
RDH11-208ENST00000556692 GSE1Q14687 1217 aa11.02□□□□□ -0.65
RDH11-208ENST00000556692 MYT1LQ9UL68 1186 aa11.02□□□□□ -0.65
RDH11-208ENST00000556692 DOK7Q18PE1 504 aa11□□□□□ -0.65
RDH11-208ENST00000556692 BOLA1Q9Y3E2 137 aa10.99□□□□□ -0.65
RDH11-208ENST00000556692 VARS2Q5ST30 1063 aaKnown RBP10.96□□□□□ -0.65
RDH11-208ENST00000556692 KLHL34Q8N239 644 aa10.96□□□□□ -0.65
RDH11-208ENST00000556692 RIMBP2O15034 1052 aa10.95□□□□□ -0.66
RDH11-208ENST00000556692 ILDR1Q86SU0 546 aaPredicted RBP10.95□□□□□ -0.66
RDH11-208ENST00000556692 CHRM1P11229 460 aaPredicted RBP10.93□□□□□ -0.66
RDH11-208ENST00000556692 FKBP8Q14318 412 aa10.93□□□□□ -0.66
RDH11-208ENST00000556692 CABP2Q9NPB3 220 aa10.93□□□□□ -0.66
RDH11-208ENST00000556692 PDAP1Q13442 181 aaKnown RBP10.92□□□□□ -0.66
RDH11-208ENST00000556692 FBXO3Q9UK99 471 aa10.89□□□□□ -0.67
RDH11-208ENST00000556692 ZNF687Q8N1G0 1237 aa10.87□□□□□ -0.67
RDH11-208ENST00000556692 PTGER2P43116 358 aa10.85□□□□□ -0.67
RDH11-208ENST00000556692 ANKRD13DQ6ZTN6 518 aa10.81□□□□□ -0.68
RDH11-208ENST00000556692 ZSWIM6Q9HCJ5 1215 aa10.8□□□□□ -0.68
RDH11-208ENST00000556692 VASPP50552 380 aaPredicted RBP10.75□□□□□ -0.69
RDH11-208ENST00000556692 GPR153Q6NV75 609 aa10.75□□□□□ -0.69
RDH11-208ENST00000556692 CIZ1Q9ULV3 898 aaPredicted RBP10.74□□□□□ -0.69
RDH11-208ENST00000556692 TMEM92Q6UXU6 159 aa10.71□□□□□ -0.69
RDH11-208ENST00000556692 EFCAB3Q8N7B9 438 aa10.71□□□□□ -0.69
RDH11-208ENST00000556692 MICALL2Q8IY33 904 aa10.7□□□□□ -0.7
RDH11-208ENST00000556692 ARSIQ5FYB1 569 aa10.69□□□□□ -0.7
RDH11-208ENST00000556692 PLA2G2EQ9NZK7 142 aa10.69□□□□□ -0.7
RDH11-208ENST00000556692 LSM11P83369 360 aaKnown RBP eCLIP10.67□□□□□ -0.7
RDH11-208ENST00000556692 ZNF316A6NFI3 1004 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms