RNA–Protein interactions for RNA: ENST00000556530.1

PNN-205, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2 BASIC

Gene PNN, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-205ENST00000556530 RIMBP3BA6NNM3 1639 aa32.67■■■□□ 2.82
PNN-205ENST00000556530 RIMBP3Q9UFD9 1639 aa32.67■■■□□ 2.82
PNN-205ENST00000556530 KIAA0586Q9BVV6 1533 aa32.66■■■□□ 2.82
PNN-205ENST00000556530 EHMT2Q96KQ7 1210 aa32.65■■■□□ 2.82
PNN-205ENST00000556530 JPH4Q96JJ6 628 aa32.64■■■□□ 2.82
PNN-205ENST00000556530 SHROOM2Q13796 1616 aa32.57■■■□□ 2.8
PNN-205ENST00000556530 KIF21BO75037 1637 aa32.55■■■□□ 2.8
PNN-205ENST00000556530 PRG4Q92954 1404 aaPredicted RBP32.53■■■□□ 2.8
PNN-205ENST00000556530 IQGAP2Q13576 1575 aa32.53■■■□□ 2.8
PNN-205ENST00000556530 ERCC6L2Q5T890 1561 aa32.52■■■□□ 2.8
PNN-205ENST00000556530 CTTNBP2Q8WZ74 1663 aa32.52■■■□□ 2.8
PNN-205ENST00000556530 CYB5RLQ6IPT4 315 aa32.48■■■□□ 2.79
PNN-205ENST00000556530 ARAP1Q96P48 1450 aa32.44■■■□□ 2.78
PNN-205ENST00000556530 UBTFP17480 764 aaKnown RBP32.44■■■□□ 2.78
PNN-205ENST00000556530 GOLGA3Q08378 1498 aa32.42■■■□□ 2.78
PNN-205ENST00000556530 RANGAP1P46060 587 aaPredicted RBP32.37■■■□□ 2.77
PNN-205ENST00000556530 TTBK1Q5TCY1 1321 aaPredicted RBP32.34■■■□□ 2.77
PNN-205ENST00000556530 CARMIL2Q6F5E8 1435 aa32.34■■■□□ 2.77
PNN-205ENST00000556530 UGGT2Q9NYU1 1516 aa32.33■■■□□ 2.77
PNN-205ENST00000556530 DISP1Q96F81 1524 aa32.27■■■□□ 2.76
PNN-205ENST00000556530 P3H3Q8IVL6 736 aa32.22■■■□□ 2.75
PNN-205ENST00000556530 KIAA0556O60303 1618 aa32.22■■■□□ 2.75
PNN-205ENST00000556530 TNIKQ9UKE5 1360 aa32.21■■■□□ 2.75
PNN-205ENST00000556530 PTPRGP23470 1445 aa32.19■■■□□ 2.74
PNN-205ENST00000556530 LOC105371045A0A1W2PR82 267 aa32.12■■■□□ 2.73
PNN-205ENST00000556530 SAMD9Q5K651 1589 aa32.07■■■□□ 2.72
PNN-205ENST00000556530 FHOD3Q2V2M9 1422 aa32■■■□□ 2.71
PNN-205ENST00000556530 EFCAB5A4FU69 1503 aa31.99■■■□□ 2.71
PNN-205ENST00000556530 UACAQ9BZF9 1416 aa31.96■■■□□ 2.71
PNN-205ENST00000556530 ADCY10Q96PN6 1610 aa31.96■■■□□ 2.71
PNN-205ENST00000556530 NPM1P06748 294 aaKnown RBP eCLIP31.94■■■□□ 2.7
PNN-205ENST00000556530 ARHGAP35Q9NRY4 1499 aa31.92■■■□□ 2.7
PNN-205ENST00000556530 PLB1Q6P1J6 1458 aa31.91■■■□□ 2.7
PNN-205ENST00000556530 CLIP1P30622 1438 aa31.87■■■□□ 2.69
PNN-205ENST00000556530 ABCC2Q92887 1545 aa31.86■■■□□ 2.69
PNN-205ENST00000556530 UHRF1BP1LA0JNW5 1464 aa31.84■■■□□ 2.69
PNN-205ENST00000556530 ABCA8O94911 1581 aa31.83■■■□□ 2.69
PNN-205ENST00000556530 ARID3CA6NKF2 412 aa31.8■■■□□ 2.68
PNN-205ENST00000556530 CEP162Q5TB80 1403 aa31.79■■■□□ 2.68
PNN-205ENST00000556530 RAPGEF6Q8TEU7 1601 aa31.76■■■□□ 2.67
PNN-205ENST00000556530 TRHP20396 242 aaPredicted RBP31.76■■■□□ 2.67
PNN-205ENST00000556530 ATP1B4Q9UN42 357 aaPredicted RBP31.74■■■□□ 2.67
PNN-205ENST00000556530 FMN1Q68DA7 1419 aa31.73■■■□□ 2.67
PNN-205ENST00000556530 KDM5BQ9UGL1 1544 aa31.7■■■□□ 2.67
PNN-205ENST00000556530 ZCCHC11Q5TAX3 1644 aaKnown RBP31.7■■■□□ 2.66
PNN-205ENST00000556530 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.67■■■□□ 2.66
PNN-205ENST00000556530 HNRNPUL2Q1KMD3 747 aaKnown RBP31.67■■■□□ 2.66
PNN-205ENST00000556530 MAPKBP1O60336 1514 aa31.64■■■□□ 2.66
PNN-205ENST00000556530 NUP153P49790 1475 aaKnown RBP31.62■■■□□ 2.65
PNN-205ENST00000556530 ATP10BO94823 1461 aa31.61■■■□□ 2.65
PNN-205ENST00000556530 ASXL2Q76L83 1435 aa31.61■■■□□ 2.65
PNN-205ENST00000556530 HECW1Q76N89 1606 aa31.55■■■□□ 2.64
PNN-205ENST00000556530 PCF11O94913 1555 aaKnown RBP31.53■■■□□ 2.64
PNN-205ENST00000556530 FAM69CQ0P6D2 419 aa31.53■■■□□ 2.64
PNN-205ENST00000556530 CASKIN1Q8WXD9 1431 aa31.51■■■□□ 2.64
PNN-205ENST00000556530 KCNH8Q96L42 1107 aa31.5■■■□□ 2.63
PNN-205ENST00000556530 ABCC10Q5T3U5 1492 aa31.49■■■□□ 2.63
PNN-205ENST00000556530 CDK13Q14004 1512 aaKnown RBP31.49■■■□□ 2.63
PNN-205ENST00000556530 WDR7Q9Y4E6 1490 aa31.47■■■□□ 2.63
PNN-205ENST00000556530 KIF13AQ9H1H9 1805 aa31.47■■■□□ 2.63
PNN-205ENST00000556530 EPRSP07814 1512 aaKnown RBP31.46■■■□□ 2.63
PNN-205ENST00000556530 DIP2BQ9P265 1576 aa31.45■■■□□ 2.63
PNN-205ENST00000556530 PLEKHD1A6NEE1 506 aa31.44■■■□□ 2.62
PNN-205ENST00000556530 FYCO1Q9BQS8 1478 aa31.43■■■□□ 2.62
PNN-205ENST00000556530 LRRIQ1Q96JM4 1722 aa31.41■■■□□ 2.62
PNN-205ENST00000556530 VPS8Q8N3P4 1428 aa31.36■■■□□ 2.61
PNN-205ENST00000556530 CDK11AQ9UQ88 783 aaPredicted RBP31.35■■■□□ 2.61
PNN-205ENST00000556530 CCDC18Q5T9S5 1454 aa31.34■■■□□ 2.61
PNN-205ENST00000556530 TSPOAP1O95153 1857 aa31.31■■■□□ 2.6
PNN-205ENST00000556530 GLI2P10070 1586 aa31.31■■■□□ 2.6
PNN-205ENST00000556530 MAP3K4Q9Y6R4 1608 aa31.2■■■□□ 2.59
PNN-205ENST00000556530 TROQ12816 1431 aaPredicted RBP31.2■■■□□ 2.59
PNN-205ENST00000556530 CD109Q6YHK3 1445 aa31.19■■■□□ 2.58
PNN-205ENST00000556530 CFAP43Q8NDM7 1665 aa31.18■■■□□ 2.58
PNN-205ENST00000556530 MAGI3Q5TCQ9 1506 aa31.16■■■□□ 2.58
PNN-205ENST00000556530 ABCA9Q8IUA7 1624 aa31.15■■■□□ 2.58
PNN-205ENST00000556530 APLP2Q06481 763 aa31.14■■■□□ 2.58
PNN-205ENST00000556530 MTUS2Q5JR59 1369 aa31.13■■■□□ 2.57
PNN-205ENST00000556530 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.13■■■□□ 2.57
PNN-205ENST00000556530 KIF14Q15058 1648 aa31.12■■■□□ 2.57
PNN-205ENST00000556530 PPRC1Q5VV67 1664 aaKnown RBP31.12■■■□□ 2.57
PNN-205ENST00000556530 TIAM1Q13009 1591 aa31.09■■■□□ 2.57
PNN-205ENST00000556530 TTC37Q6PGP7 1564 aa31.09■■■□□ 2.57
PNN-205ENST00000556530 TEX14Q8IWB6 1497 aa31.06■■■□□ 2.56
PNN-205ENST00000556530 EHBP1L1Q8N3D4 1523 aa31.01■■■□□ 2.55
PNN-205ENST00000556530 KANK4Q5T7N3 995 aaPredicted RBP31■■■□□ 2.55
PNN-205ENST00000556530 MAP3K1Q13233 1512 aa30.98■■■□□ 2.55
PNN-205ENST00000556530 LRRC9Q6ZRR7 1453 aa30.96■■■□□ 2.55
PNN-205ENST00000556530 MYO5CQ9NQX4 1742 aa30.96■■■□□ 2.55
PNN-205ENST00000556530 PLCH2O75038 1416 aa30.94■■■□□ 2.54
PNN-205ENST00000556530 KDM6BO15054 1643 aa30.91■■■□□ 2.54
PNN-205ENST00000556530 FANCAO15360 1455 aa30.9■■■□□ 2.54
PNN-205ENST00000556530 CCNB3Q8WWL7 1395 aa30.9■■■□□ 2.54
PNN-205ENST00000556530 SUPT6HQ7KZ85 1726 aaKnown RBP30.9■■■□□ 2.54
PNN-205ENST00000556530 ARHGAP5Q13017 1502 aa30.88■■■□□ 2.53
PNN-205ENST00000556530 EFCAB2Q5VUJ9 269 aa30.88■■■□□ 2.53
PNN-205ENST00000556530 NEO1Q92859 1461 aa30.87■■■□□ 2.53
PNN-205ENST00000556530 NCOA2Q15596 1464 aa30.86■■■□□ 2.53
PNN-205ENST00000556530 CDC42BPAQ5VT25 1732 aa30.86■■■□□ 2.53
PNN-205ENST00000556530 CDC42BPBQ9Y5S2 1711 aa30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms