RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 METRNQ9UJH8 293 aa11.32□□□□□ -0.6
SUPT16H-206ENST00000556309 POTEB2H3BUK9 544 aa11.3□□□□□ -0.6
SUPT16H-206ENST00000556309 ATMINO43313 823 aaPredicted RBP11.3□□□□□ -0.6
SUPT16H-206ENST00000556309 PROM2Q8N271 834 aa11.3□□□□□ -0.6
SUPT16H-206ENST00000556309 MS4A3Q96HJ5 214 aa11.3□□□□□ -0.6
SUPT16H-206ENST00000556309 POTEMA6NI47 508 aa11.29□□□□□ -0.6
SUPT16H-206ENST00000556309 PELP1Q8IZL8 1130 aaKnown RBP11.27□□□□□ -0.61
SUPT16H-206ENST00000556309 SCUBE2Q9NQ36 999 aa11.25□□□□□ -0.61
SUPT16H-206ENST00000556309 POTEGQ6S5H5 508 aa11.24□□□□□ -0.61
SUPT16H-206ENST00000556309 CCDC61Q9Y6R9 512 aa11.23□□□□□ -0.61
SUPT16H-206ENST00000556309 TSPYL2Q9H2G4 693 aaPredicted RBP11.21□□□□□ -0.61
SUPT16H-206ENST00000556309 KIF12Q96FN5 646 aa11.19□□□□□ -0.62
SUPT16H-206ENST00000556309 TIE1P35590 1138 aa11.18□□□□□ -0.62
SUPT16H-206ENST00000556309 FKBP8Q14318 412 aa11.17□□□□□ -0.62
SUPT16H-206ENST00000556309 SGIP1Q9BQI5 828 aa11.15□□□□□ -0.62
SUPT16H-206ENST00000556309 ZBTB47Q9UFB7 747 aaPredicted RBP11.15□□□□□ -0.62
SUPT16H-206ENST00000556309 ATN1P54259 1190 aaPredicted RBP11.14□□□□□ -0.63
SUPT16H-206ENST00000556309 MIER1Q8N108 512 aa11.11□□□□□ -0.63
SUPT16H-206ENST00000556309 IER5LQ5T953 404 aa11.1□□□□□ -0.63
SUPT16H-206ENST00000556309 BMP2KQ9NSY1 1161 aaPredicted RBP11.1□□□□□ -0.63
SUPT16H-206ENST00000556309 POTEJP0CG39 1038 aa11.08□□□□□ -0.64
SUPT16H-206ENST00000556309 MAP3K13O43283 966 aa11.06□□□□□ -0.64
SUPT16H-206ENST00000556309 SEC24BO95487 1268 aa11.05□□□□□ -0.64
SUPT16H-206ENST00000556309 FAM163AQ96GL9 167 aaPredicted RBP11.03□□□□□ -0.64
SUPT16H-206ENST00000556309 TTLL13PA6NNM8 815 aa11.01□□□□□ -0.65
SUPT16H-206ENST00000556309 RASEFQ8IZ41 740 aa11.01□□□□□ -0.65
SUPT16H-206ENST00000556309 PLCD3Q8N3E9 789 aa11.01□□□□□ -0.65
SUPT16H-206ENST00000556309 POTEFA5A3E0 1075 aa10.97□□□□□ -0.65
SUPT16H-206ENST00000556309 PCDHB13Q9Y5F0 798 aa10.96□□□□□ -0.65
SUPT16H-206ENST00000556309 LCE2DQ5TA82 110 aaPredicted RBP10.95□□□□□ -0.66
SUPT16H-206ENST00000556309 FAM212AQ96EL1 285 aa10.94□□□□□ -0.66
SUPT16H-206ENST00000556309 TRIM35Q9UPQ4 493 aa10.94□□□□□ -0.66
SUPT16H-206ENST00000556309 TRPC6Q9Y210 931 aa10.93□□□□□ -0.66
SUPT16H-206ENST00000556309 COLQQ9Y215 455 aaPredicted RBP10.9□□□□□ -0.66
SUPT16H-206ENST00000556309 PLCG2P16885 1265 aa10.88□□□□□ -0.67
SUPT16H-206ENST00000556309 NUBP1P53384 320 aa10.88□□□□□ -0.67
SUPT16H-206ENST00000556309 SNPHO15079 494 aa10.84□□□□□ -0.67
SUPT16H-206ENST00000556309 IFNL1Q8IU54 200 aa10.84□□□□□ -0.67
SUPT16H-206ENST00000556309 SLAIN1Q8ND83 568 aa10.84□□□□□ -0.67
SUPT16H-206ENST00000556309 TMEM106CQ9BVX2 250 aa10.84□□□□□ -0.67
SUPT16H-206ENST00000556309 CDAN1Q8IWY9 1227 aa10.83□□□□□ -0.68
SUPT16H-206ENST00000556309 TMEM121BQ9BXQ6 578 aaPredicted RBP10.83□□□□□ -0.68
SUPT16H-206ENST00000556309 OCEL1Q9H607 264 aa10.79□□□□□ -0.68
SUPT16H-206ENST00000556309 IRX5P78411 483 aaPredicted RBP10.78□□□□□ -0.68
SUPT16H-206ENST00000556309 FBXO3Q9UK99 471 aa10.76□□□□□ -0.69
SUPT16H-206ENST00000556309 ST18O60284 1047 aa10.75□□□□□ -0.69
SUPT16H-206ENST00000556309 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.74□□□□□ -0.69
SUPT16H-206ENST00000556309 DCAF8Q5TAQ9 597 aa10.71□□□□□ -0.69
SUPT16H-206ENST00000556309 GSE1Q14687 1217 aa10.68□□□□□ -0.7
SUPT16H-206ENST00000556309 ZNF467Q7Z7K2 595 aaPredicted RBP10.68□□□□□ -0.7
SUPT16H-206ENST00000556309 L3MBTL3Q96JM7 780 aaPredicted RBP10.66□□□□□ -0.7
SUPT16H-206ENST00000556309 GOLGA2Q08379 1002 aa10.65□□□□□ -0.7
SUPT16H-206ENST00000556309 PYGBP11216 843 aa10.63□□□□□ -0.71
SUPT16H-206ENST00000556309 C3orf67Q6ZVT6 689 aa10.62□□□□□ -0.71
SUPT16H-206ENST00000556309 MKRN3Q13064 507 aaKnown RBP10.61□□□□□ -0.71
SUPT16H-206ENST00000556309 CHRM1P11229 460 aaPredicted RBP10.6□□□□□ -0.71
SUPT16H-206ENST00000556309 VASPP50552 380 aaPredicted RBP10.57□□□□□ -0.72
SUPT16H-206ENST00000556309 MMRN1Q13201 1228 aa10.57□□□□□ -0.72
SUPT16H-206ENST00000556309 SPNS2Q8IVW8 549 aa10.57□□□□□ -0.72
SUPT16H-206ENST00000556309 PCDHB8Q9UN66 801 aa10.56□□□□□ -0.72
SUPT16H-206ENST00000556309 PDCD7Q8N8D1 485 aaKnown RBP10.53□□□□□ -0.72
SUPT16H-206ENST00000556309 KLHL34Q8N239 644 aa10.52□□□□□ -0.73
SUPT16H-206ENST00000556309 EMP3P54852 163 aa10.5□□□□□ -0.73
SUPT16H-206ENST00000556309 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.5□□□□□ -0.731e-7■■□□□ 14.2
SUPT16H-206ENST00000556309 G3V3G9 751 aa10.48□□□□□ -0.73
SUPT16H-206ENST00000556309 PSEN1P49768 467 aa10.47□□□□□ -0.73
SUPT16H-206ENST00000556309 MARVELD3Q96A59 401 aa10.47□□□□□ -0.73
SUPT16H-206ENST00000556309 PDAP1Q13442 181 aaKnown RBP10.46□□□□□ -0.73
SUPT16H-206ENST00000556309 ILDR1Q86SU0 546 aaPredicted RBP10.46□□□□□ -0.73
SUPT16H-206ENST00000556309 IFNLR1Q8IU57 520 aaPredicted RBP10.46□□□□□ -0.73
SUPT16H-206ENST00000556309 HS3ST6Q96QI5 342 aa10.41□□□□□ -0.74
SUPT16H-206ENST00000556309 BOLA1Q9Y3E2 137 aa10.37□□□□□ -0.75
SUPT16H-206ENST00000556309 FAM205CA6NFA0 338 aa10.36□□□□□ -0.75
SUPT16H-206ENST00000556309 DOK7Q18PE1 504 aa10.36□□□□□ -0.75
SUPT16H-206ENST00000556309 TRIM41Q8WV44 630 aa10.36□□□□□ -0.75
SUPT16H-206ENST00000556309 RIMBP2O15034 1052 aa10.35□□□□□ -0.75
SUPT16H-206ENST00000556309 ZNF710Q8N1W2 664 aa10.34□□□□□ -0.75
SUPT16H-206ENST00000556309 SPOCK2Q92563 424 aa10.34□□□□□ -0.75
SUPT16H-206ENST00000556309 KRTAP3-3Q9BYR6 98 aa10.33□□□□□ -0.76
SUPT16H-206ENST00000556309 KRTAP3-2Q9BYR7 98 aa10.33□□□□□ -0.76
SUPT16H-206ENST00000556309 HOXB1P14653 301 aaPredicted RBP10.32□□□□□ -0.76
SUPT16H-206ENST00000556309 CABP2Q9NPB3 220 aa10.31□□□□□ -0.76
SUPT16H-206ENST00000556309 ZSWIM6Q9HCJ5 1215 aa10.29□□□□□ -0.76
SUPT16H-206ENST00000556309 HOXB3P14651 431 aaPredicted RBP10.26□□□□□ -0.77
SUPT16H-206ENST00000556309 CIZ1Q9ULV3 898 aaPredicted RBP10.26□□□□□ -0.77
SUPT16H-206ENST00000556309 POTEB3A0JP26 581 aa10.25□□□□□ -0.77
SUPT16H-206ENST00000556309 PTGER2P43116 358 aa10.25□□□□□ -0.77
SUPT16H-206ENST00000556309 POTEBQ6S5H4 581 aa10.25□□□□□ -0.77
SUPT16H-206ENST00000556309 ERBB3P21860 1342 aa10.25□□□□□ -0.77
SUPT16H-206ENST00000556309 RTN4Q9NQC3 1192 aaKnown RBP10.24□□□□□ -0.77
SUPT16H-206ENST00000556309 DPY19L2Q6NUT2 758 aa10.23□□□□□ -0.77
SUPT16H-206ENST00000556309 SOX12O15370 315 aa10.18□□□□□ -0.78
SUPT16H-206ENST00000556309 RNF166Q96A37 237 aaPredicted RBP10.18□□□□□ -0.78
SUPT16H-206ENST00000556309 AMER1Q5JTC6 1135 aaPredicted RBP10.17□□□□□ -0.78
SUPT16H-206ENST00000556309 ZNF687Q8N1G0 1237 aa10.15□□□□□ -0.78
SUPT16H-206ENST00000556309 EFCAB3Q8N7B9 438 aa10.13□□□□□ -0.79
SUPT16H-206ENST00000556309 MYT1LQ9UL68 1186 aa10.13□□□□□ -0.79
SUPT16H-206ENST00000556309 PKD2Q13563 968 aa10.12□□□□□ -0.79
SUPT16H-206ENST00000556309 VARS2Q5ST30 1063 aaKnown RBP10.12□□□□□ -0.79
SUPT16H-206ENST00000556309 MICALL2Q8IY33 904 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms