RNA–Protein interactions for RNA: ENST00000556249.1

SDR39U1-217, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-217ENST00000556249 ERICH3Q5RHP9 1530 aa28.45■■■□□ 2.15
SDR39U1-217ENST00000556249 NPM1P06748 294 aaKnown RBP eCLIP28.37■■■□□ 2.13
SDR39U1-217ENST00000556249 ABCC10Q5T3U5 1492 aa28.37■■■□□ 2.13
SDR39U1-217ENST00000556249 RUSC2Q8N2Y8 1516 aa28.3■■■□□ 2.12
SDR39U1-217ENST00000556249 KDM4FA0A1W2PPD8 638 aa28.28■■■□□ 2.12
SDR39U1-217ENST00000556249 DIP2BQ9P265 1576 aa28.27■■■□□ 2.12
SDR39U1-217ENST00000556249 MAPKBP1O60336 1514 aa28.26■■■□□ 2.11
SDR39U1-217ENST00000556249 ADCY10Q96PN6 1610 aa28.25■■■□□ 2.11
SDR39U1-217ENST00000556249 KDM6BO15054 1643 aa28.19■■■□□ 2.1
SDR39U1-217ENST00000556249 TSPOAP1O95153 1857 aa28.18■■■□□ 2.1
SDR39U1-217ENST00000556249 TTBK1Q5TCY1 1321 aaPredicted RBP28.14■■■□□ 2.09
SDR39U1-217ENST00000556249 KIAA0586Q9BVV6 1533 aa28.1■■■□□ 2.09
SDR39U1-217ENST00000556249 IGF1RP08069 1367 aa28.06■■■□□ 2.08
SDR39U1-217ENST00000556249 ILDR1Q86SU0 546 aaPredicted RBP28.03■■■□□ 2.08
SDR39U1-217ENST00000556249 PTPRGP23470 1445 aa28.01■■■□□ 2.07
SDR39U1-217ENST00000556249 KIF27Q86VH2 1401 aa27.94■■■□□ 2.06
SDR39U1-217ENST00000556249 CUL7Q14999 1698 aa27.91■■■□□ 2.06
SDR39U1-217ENST00000556249 ASXL2Q76L83 1435 aa27.89■■■□□ 2.06
SDR39U1-217ENST00000556249 TNIKQ9UKE5 1360 aa27.88■■■□□ 2.05
SDR39U1-217ENST00000556249 ABCC2Q92887 1545 aa27.88■■■□□ 2.05
SDR39U1-217ENST00000556249 PPRC1Q5VV67 1664 aaKnown RBP27.85■■■□□ 2.05
SDR39U1-217ENST00000556249 CARMIL1Q5VZK9 1371 aa27.85■■■□□ 2.05
SDR39U1-217ENST00000556249 ADGRL1O94910 1474 aa27.84■■■□□ 2.05
SDR39U1-217ENST00000556249 CARMIL2Q6F5E8 1435 aa27.84■■■□□ 2.05
SDR39U1-217ENST00000556249 PLB1Q6P1J6 1458 aa27.82■■■□□ 2.04
SDR39U1-217ENST00000556249 COL17A1Q9UMD9 1497 aaPredicted RBP27.81■■■□□ 2.04
SDR39U1-217ENST00000556249 GLI2P10070 1586 aa27.8■■■□□ 2.04
SDR39U1-217ENST00000556249 UACAQ9BZF9 1416 aa27.75■■■□□ 2.03
SDR39U1-217ENST00000556249 IQGAP2Q13576 1575 aa27.73■■■□□ 2.03
SDR39U1-217ENST00000556249 UHRF1BP1LA0JNW5 1464 aa27.73■■■□□ 2.03
SDR39U1-217ENST00000556249 EPRSP07814 1512 aaKnown RBP27.71■■■□□ 2.03
SDR39U1-217ENST00000556249 DISP1Q96F81 1524 aa27.7■■■□□ 2.02
SDR39U1-217ENST00000556249 MAP3K4Q9Y6R4 1608 aa27.65■■■□□ 2.02
SDR39U1-217ENST00000556249 HECW2Q9P2P5 1572 aa27.65■■■□□ 2.02
SDR39U1-217ENST00000556249 KDM5BQ9UGL1 1544 aa27.64■■■□□ 2.02
SDR39U1-217ENST00000556249 ZCCHC11Q5TAX3 1644 aaKnown RBP27.6■■■□□ 2.01
SDR39U1-217ENST00000556249 TEX14Q8IWB6 1497 aa27.6■■■□□ 2.01
SDR39U1-217ENST00000556249 UGGT2Q9NYU1 1516 aa27.53■■■□□ 2
SDR39U1-217ENST00000556249 KIAA0556O60303 1618 aa27.51■■□□□ 1.99
SDR39U1-217ENST00000556249 RAPGEF2Q9Y4G8 1499 aa27.5■■□□□ 1.99
SDR39U1-217ENST00000556249 WDR7Q9Y4E6 1490 aa27.49■■□□□ 1.99
SDR39U1-217ENST00000556249 KCNH8Q96L42 1107 aa27.48■■□□□ 1.99
SDR39U1-217ENST00000556249 CD109Q6YHK3 1445 aa27.42■■□□□ 1.98
SDR39U1-217ENST00000556249 MAGI3Q5TCQ9 1506 aa27.36■■□□□ 1.97
SDR39U1-217ENST00000556249 ARID3CA6NKF2 412 aa27.32■■□□□ 1.96
SDR39U1-217ENST00000556249 CFAP43Q8NDM7 1665 aa27.32■■□□□ 1.96
SDR39U1-217ENST00000556249 KIF21BO75037 1637 aa27.31■■□□□ 1.96
SDR39U1-217ENST00000556249 ABCA8O94911 1581 aa27.3■■□□□ 1.96
SDR39U1-217ENST00000556249 CTTNBP2Q8WZ74 1663 aa27.25■■□□□ 1.95
SDR39U1-217ENST00000556249 GOLGA3Q08378 1498 aa27.24■■□□□ 1.95
SDR39U1-217ENST00000556249 FBXO41Q8TF61 875 aa27.21■■□□□ 1.95
SDR39U1-217ENST00000556249 P3H3Q8IVL6 736 aa27.19■■□□□ 1.94
SDR39U1-217ENST00000556249 ARAP3Q8WWN8 1544 aa27.16■■□□□ 1.94
SDR39U1-217ENST00000556249 RAPGEF3O95398 923 aa27.15■■□□□ 1.94
SDR39U1-217ENST00000556249 PTPRMP28827 1452 aa27.13■■□□□ 1.93
SDR39U1-217ENST00000556249 ATP10BO94823 1461 aa27.13■■□□□ 1.93
SDR39U1-217ENST00000556249 ADAMTSL3P82987 1691 aa27.08■■□□□ 1.92
SDR39U1-217ENST00000556249 PRXQ9BXM0 1461 aa27.06■■□□□ 1.92
SDR39U1-217ENST00000556249 ARID4BQ4LE39 1312 aaPredicted RBP27.04■■□□□ 1.92
SDR39U1-217ENST00000556249 ABCA9Q8IUA7 1624 aa27.03■■□□□ 1.92
SDR39U1-217ENST00000556249 FAM9AQ8IZU1 332 aaPredicted RBP27.02■■□□□ 1.92
SDR39U1-217ENST00000556249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.01■■□□□ 1.91
SDR39U1-217ENST00000556249 HNRNPUL2Q1KMD3 747 aaKnown RBP27.01■■□□□ 1.91
SDR39U1-217ENST00000556249 PHLDB1Q86UU1 1377 aa26.99■■□□□ 1.91
SDR39U1-217ENST00000556249 MADDQ8WXG6 1647 aa26.98■■□□□ 1.91
SDR39U1-217ENST00000556249 BCORL1Q5H9F3 1711 aa26.96■■□□□ 1.91
SDR39U1-217ENST00000556249 PLPPR3Q6T4P5 718 aa26.95■■□□□ 1.9
SDR39U1-217ENST00000556249 FRMPD1Q5SYB0 1578 aa26.95■■□□□ 1.9
SDR39U1-217ENST00000556249 NEO1Q92859 1461 aa26.94■■□□□ 1.9
SDR39U1-217ENST00000556249 PCF11O94913 1555 aaKnown RBP26.94■■□□□ 1.9
SDR39U1-217ENST00000556249 LMTK3Q96Q04 1460 aa26.93■■□□□ 1.9
SDR39U1-217ENST00000556249 RANGAP1P46060 587 aaPredicted RBP26.9■■□□□ 1.9
SDR39U1-217ENST00000556249 HSPA2P54652 639 aa26.9■■□□□ 1.9
SDR39U1-217ENST00000556249 RAPGEF6Q8TEU7 1601 aa26.89■■□□□ 1.9
SDR39U1-217ENST00000556249 RIMS1Q86UR5 1692 aaKnown RBP26.86■■□□□ 1.89
SDR39U1-217ENST00000556249 SAMD9Q5K651 1589 aa26.84■■□□□ 1.89
SDR39U1-217ENST00000556249 NUP153P49790 1475 aaKnown RBP26.83■■□□□ 1.89
SDR39U1-217ENST00000556249 DENND4BO75064 1496 aaPredicted RBP26.8■■□□□ 1.88
SDR39U1-217ENST00000556249 ARHGEF40Q8TER5 1519 aa26.8■■□□□ 1.88
SDR39U1-217ENST00000556249 AKNAQ7Z591 1439 aa26.77■■□□□ 1.88
SDR39U1-217ENST00000556249 PLEKHD1A6NEE1 506 aa26.77■■□□□ 1.88
SDR39U1-217ENST00000556249 CSRNP3Q8WYN3 585 aa26.77■■□□□ 1.88
SDR39U1-217ENST00000556249 RICTORQ6R327 1708 aa26.76■■□□□ 1.88
SDR39U1-217ENST00000556249 FHOD3Q2V2M9 1422 aa26.76■■□□□ 1.87
SDR39U1-217ENST00000556249 MLECQ14165 292 aa26.76■■□□□ 1.87
SDR39U1-217ENST00000556249 FANCAO15360 1455 aa26.74■■□□□ 1.87
SDR39U1-217ENST00000556249 SIGLEC1Q9BZZ2 1709 aa26.73■■□□□ 1.87
SDR39U1-217ENST00000556249 YEATS2Q9ULM3 1422 aa26.73■■□□□ 1.87
SDR39U1-217ENST00000556249 CERKQ8TCT0 537 aa26.7■■□□□ 1.86
SDR39U1-217ENST00000556249 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.7■■□□□ 1.86
SDR39U1-217ENST00000556249 POGZQ7Z3K3 1410 aa26.68■■□□□ 1.86
SDR39U1-217ENST00000556249 ZFYVE16Q7Z3T8 1539 aa26.65■■□□□ 1.86
SDR39U1-217ENST00000556249 TTC37Q6PGP7 1564 aa26.65■■□□□ 1.86
SDR39U1-217ENST00000556249 ZMYM4Q5VZL5 1548 aa26.63■■□□□ 1.85
SDR39U1-217ENST00000556249 CFAP74Q9C0B2 1584 aa26.63■■□□□ 1.85
SDR39U1-217ENST00000556249 HECW1Q76N89 1606 aa26.61■■□□□ 1.85
SDR39U1-217ENST00000556249 EFCAB5A4FU69 1503 aa26.6■■□□□ 1.85
SDR39U1-217ENST00000556249 SCAPERQ9BY12 1400 aa26.57■■□□□ 1.84
SDR39U1-217ENST00000556249 FER1L4A9Z1Z3 1794 aa26.57■■□□□ 1.84
SDR39U1-217ENST00000556249 CEBPAP49715 358 aaPredicted RBP26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms