RNA–Protein interactions for RNA: ENST00000555944.5

NSFL1C-213, Transcript of NSFL1 cofactor, humanhuman

TSL 2

Gene NSFL1C, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-213ENST00000555944 ZNF316A6NFI3 1004 aaPredicted RBP26.7■■□□□ 1.87
NSFL1C-213ENST00000555944 GTF3C3Q9Y5Q9 886 aa26.69■■□□□ 1.86
NSFL1C-213ENST00000555944 GAPVD1Q14C86 1478 aa26.64■■□□□ 1.86
NSFL1C-213ENST00000555944 CTTNBP2Q8WZ74 1663 aa26.63■■□□□ 1.85
NSFL1C-213ENST00000555944 TARBP1Q13395 1621 aaKnown RBP26.63■■□□□ 1.85
NSFL1C-213ENST00000555944 CENPBP07199 599 aaPredicted RBP26.6■■□□□ 1.85
NSFL1C-213ENST00000555944 P3H3Q8IVL6 736 aa26.58■■□□□ 1.85
NSFL1C-213ENST00000555944 YTHDC1Q96MU7 727 aaKnown RBP26.57■■□□□ 1.84
NSFL1C-213ENST00000555944 TIAM1Q13009 1591 aa26.56■■□□□ 1.84
NSFL1C-213ENST00000555944 MRC2Q9UBG0 1479 aa26.55■■□□□ 1.84
NSFL1C-213ENST00000555944 FHOD3Q2V2M9 1422 aa26.54■■□□□ 1.84
NSFL1C-213ENST00000555944 PCF11O94913 1555 aaKnown RBP26.53■■□□□ 1.84
NSFL1C-213ENST00000555944 EFCAB5A4FU69 1503 aa26.51■■□□□ 1.83
NSFL1C-213ENST00000555944 RRBP1Q9P2E9 1410 aaKnown RBP26.5■■□□□ 1.83
NSFL1C-213ENST00000555944 FHAD1B1AJZ9 1412 aa26.5■■□□□ 1.83
NSFL1C-213ENST00000555944 MIER1Q8N108 512 aa26.49■■□□□ 1.83
NSFL1C-213ENST00000555944 MAP3K1Q13233 1512 aa26.49■■□□□ 1.83
NSFL1C-213ENST00000555944 PBRM1Q86U86 1689 aa26.47■■□□□ 1.83
NSFL1C-213ENST00000555944 CFAP43Q8NDM7 1665 aa26.44■■□□□ 1.82
NSFL1C-213ENST00000555944 AQRO60306 1485 aaKnown RBP eCLIP26.43■■□□□ 1.827e-7■■□□□ 13.1
NSFL1C-213ENST00000555944 LRRC9Q6ZRR7 1453 aa26.42■■□□□ 1.82
NSFL1C-213ENST00000555944 CCNB3Q8WWL7 1395 aa26.39■■□□□ 1.82
NSFL1C-213ENST00000555944 WDR62O43379 1518 aa26.38■■□□□ 1.81
NSFL1C-213ENST00000555944 FYCO1Q9BQS8 1478 aa26.37■■□□□ 1.81
NSFL1C-213ENST00000555944 ATP1B4Q9UN42 357 aaPredicted RBP26.37■■□□□ 1.81
NSFL1C-213ENST00000555944 SAMD9Q5K651 1589 aa26.37■■□□□ 1.81
NSFL1C-213ENST00000555944 CASKIN1Q8WXD9 1431 aa26.35■■□□□ 1.81
NSFL1C-213ENST00000555944 ADAMTS12P58397 1594 aa26.33■■□□□ 1.81
NSFL1C-213ENST00000555944 ZNF608Q9ULD9 1512 aaPredicted RBP26.32■■□□□ 1.8
NSFL1C-213ENST00000555944 SNAPC4Q5SXM2 1469 aa26.3■■□□□ 1.8
NSFL1C-213ENST00000555944 PHLDB1Q86UU1 1377 aa26.3■■□□□ 1.8
NSFL1C-213ENST00000555944 FMN1Q68DA7 1419 aa26.3■■□□□ 1.8
NSFL1C-213ENST00000555944 IFT140Q96RY7 1462 aa26.3■■□□□ 1.8
NSFL1C-213ENST00000555944 GRIN2BQ13224 1484 aa26.28■■□□□ 1.8
NSFL1C-213ENST00000555944 ERCC6Q03468 1493 aa26.26■■□□□ 1.79
NSFL1C-213ENST00000555944 ITGAEP38570 1179 aa26.25■■□□□ 1.79
NSFL1C-213ENST00000555944 LRRIQ1Q96JM4 1722 aa26.23■■□□□ 1.79
NSFL1C-213ENST00000555944 DHX57Q6P158 1386 aaKnown RBP26.22■■□□□ 1.79
NSFL1C-213ENST00000555944 THOC2Q8NI27 1593 aaKnown RBP26.21■■□□□ 1.79
NSFL1C-213ENST00000555944 IQGAP2Q13576 1575 aa26.19■■□□□ 1.78
NSFL1C-213ENST00000555944 EIF4G3O43432 1585 aaKnown RBP26.18■■□□□ 1.78
NSFL1C-213ENST00000555944 FAM50AQ14320 339 aaKnown RBP26.1■■□□□ 1.77
NSFL1C-213ENST00000555944 MTUS2Q5JR59 1369 aa26.07■■□□□ 1.76
NSFL1C-213ENST00000555944 CLSPNQ9HAW4 1339 aa26.06■■□□□ 1.76
NSFL1C-213ENST00000555944 RAB3GAP2Q9H2M9 1393 aa26.06■■□□□ 1.76
NSFL1C-213ENST00000555944 UGGT2Q9NYU1 1516 aa26.02■■□□□ 1.76
NSFL1C-213ENST00000555944 GRIN2AQ12879 1464 aa26.02■■□□□ 1.76
NSFL1C-213ENST00000555944 FGD6Q6ZV73 1430 aa25.99■■□□□ 1.75
NSFL1C-213ENST00000555944 MAGI3Q5TCQ9 1506 aa25.99■■□□□ 1.75
NSFL1C-213ENST00000555944 SETD5Q9C0A6 1442 aa25.98■■□□□ 1.75
NSFL1C-213ENST00000555944 KIAA0586Q9BVV6 1533 aa25.98■■□□□ 1.75
NSFL1C-213ENST00000555944 HECW1Q76N89 1606 aa25.98■■□□□ 1.75
NSFL1C-213ENST00000555944 NCOA2Q15596 1464 aa25.97■■□□□ 1.75
NSFL1C-213ENST00000555944 EHBP1L1Q8N3D4 1523 aa25.97■■□□□ 1.75
NSFL1C-213ENST00000555944 SUPT6HQ7KZ85 1726 aaKnown RBP25.96■■□□□ 1.75
NSFL1C-213ENST00000555944 CCDC18Q5T9S5 1454 aa25.95■■□□□ 1.74
NSFL1C-213ENST00000555944 MAGI1Q96QZ7 1491 aaPredicted RBP25.95■■□□□ 1.74
NSFL1C-213ENST00000555944 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.95■■□□□ 1.74
NSFL1C-213ENST00000555944 KIAA0556O60303 1618 aa25.93■■□□□ 1.74
NSFL1C-213ENST00000555944 DISP1Q96F81 1524 aa25.93■■□□□ 1.74
NSFL1C-213ENST00000555944 EPRSP07814 1512 aaKnown RBP25.91■■□□□ 1.74
NSFL1C-213ENST00000555944 CDK13Q14004 1512 aaKnown RBP25.91■■□□□ 1.74
NSFL1C-213ENST00000555944 MAPKBP1O60336 1514 aa25.9■■□□□ 1.74
NSFL1C-213ENST00000555944 MYOM3Q5VTT5 1437 aa25.89■■□□□ 1.74
NSFL1C-213ENST00000555944 SYNJ2O15056 1496 aa25.89■■□□□ 1.74
NSFL1C-213ENST00000555944 CEP170Q5SW79 1584 aa25.89■■□□□ 1.74
NSFL1C-213ENST00000555944 ARHGEF11O15085 1522 aa25.87■■□□□ 1.73
NSFL1C-213ENST00000555944 ARID3CA6NKF2 412 aa25.86■■□□□ 1.73
NSFL1C-213ENST00000555944 CHMP7Q8WUX9 453 aaPredicted RBP25.86■■□□□ 1.73
NSFL1C-213ENST00000555944 PTPRKQ15262 1439 aa25.83■■□□□ 1.73
NSFL1C-213ENST00000555944 FBLN2P98095 1184 aa25.83■■□□□ 1.72
NSFL1C-213ENST00000555944 PTPN23Q9H3S7 1636 aa25.8■■□□□ 1.72
NSFL1C-213ENST00000555944 RAPGEF6Q8TEU7 1601 aa25.76■■□□□ 1.71
NSFL1C-213ENST00000555944 NUP153P49790 1475 aaKnown RBP25.76■■□□□ 1.71
NSFL1C-213ENST00000555944 NUP160Q12769 1436 aa25.75■■□□□ 1.71
NSFL1C-213ENST00000555944 KCNH8Q96L42 1107 aa25.74■■□□□ 1.71
NSFL1C-213ENST00000555944 SIN3AQ96ST3 1273 aa25.71■■□□□ 1.71
NSFL1C-213ENST00000555944 HFM1A2PYH4 1435 aa25.7■■□□□ 1.71
NSFL1C-213ENST00000555944 TCOF1Q13428 1488 aaKnown RBP25.69■■□□□ 1.7
NSFL1C-213ENST00000555944 NAIPQ13075 1403 aa25.66■■□□□ 1.7
NSFL1C-213ENST00000555944 PLB1Q6P1J6 1458 aa25.65■■□□□ 1.7
NSFL1C-213ENST00000555944 JPH4Q96JJ6 628 aa25.65■■□□□ 1.7
NSFL1C-213ENST00000555944 SUPT16HQ9Y5B9 1047 aaKnown RBP25.62■■□□□ 1.69
NSFL1C-213ENST00000555944 MIA2Q96PC5 1412 aa25.61■■□□□ 1.69
NSFL1C-213ENST00000555944 CARMIL2Q6F5E8 1435 aa25.6■■□□□ 1.69
NSFL1C-213ENST00000555944 CHIC2Q9UKJ5 165 aa25.57■■□□□ 1.68
NSFL1C-213ENST00000555944 HIRIP3Q9BW71 556 aaPredicted RBP25.56■■□□□ 1.68
NSFL1C-213ENST00000555944 UACAQ9BZF9 1416 aa25.56■■□□□ 1.68
NSFL1C-213ENST00000555944 RRP7BPQ9NSQ0 103 aa25.55■■□□□ 1.68
NSFL1C-213ENST00000555944 GCC2Q8IWJ2 1684 aa25.55■■□□□ 1.68
NSFL1C-213ENST00000555944 PRG4Q92954 1404 aaPredicted RBP25.54■■□□□ 1.68
NSFL1C-213ENST00000555944 MYT1Q01538 1121 aa25.53■■□□□ 1.68
NSFL1C-213ENST00000555944 DDX10Q13206 875 aaKnown RBP25.53■■□□□ 1.68
NSFL1C-213ENST00000555944 CDK11AQ9UQ88 783 aaPredicted RBP25.51■■□□□ 1.68
NSFL1C-213ENST00000555944 CHD1O14646 1710 aa25.51■■□□□ 1.67
NSFL1C-213ENST00000555944 TROQ12816 1431 aaPredicted RBP25.51■■□□□ 1.67
NSFL1C-213ENST00000555944 KDM6BO15054 1643 aa25.5■■□□□ 1.67
NSFL1C-213ENST00000555944 KIF14Q15058 1648 aa25.49■■□□□ 1.67
NSFL1C-213ENST00000555944 ABCA8O94911 1581 aa25.48■■□□□ 1.67
NSFL1C-213ENST00000555944 ZNF644Q9H582 1327 aaPredicted RBP25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms