RNA–Protein interactions for RNA: ENST00000555763.1

NEK9-207, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-207ENST00000555763 DIP2BQ9P265 1576 aa11.5□□□□□ -0.57
NEK9-207ENST00000555763 POLA1P09884 1462 aaPredicted RBP11.49□□□□□ -0.57
NEK9-207ENST00000555763 TOP2AP11388 1531 aaKnown RBP11.49□□□□□ -0.57
NEK9-207ENST00000555763 SYNJ2O15056 1496 aa11.46□□□□□ -0.57
NEK9-207ENST00000555763 ADGRL1O94910 1474 aa11.46□□□□□ -0.57
NEK9-207ENST00000555763 SHROOM2Q13796 1616 aa11.45□□□□□ -0.58
NEK9-207ENST00000555763 ABCC10Q5T3U5 1492 aa11.43□□□□□ -0.58
NEK9-207ENST00000555763 CEP170Q5SW79 1584 aa11.42□□□□□ -0.58
NEK9-207ENST00000555763 SLC4A1APQ9BWU0 796 aaKnown RBP11.42□□□□□ -0.58
NEK9-207ENST00000555763 MAPKBP1O60336 1514 aa11.41□□□□□ -0.58
NEK9-207ENST00000555763 RAD54L2Q9Y4B4 1467 aa11.4□□□□□ -0.58
NEK9-207ENST00000555763 SOCS7O14512 581 aa11.4□□□□□ -0.58
NEK9-207ENST00000555763 GRIN2BQ13224 1484 aa11.38□□□□□ -0.59
NEK9-207ENST00000555763 CHMP7Q8WUX9 453 aaPredicted RBP11.37□□□□□ -0.59
NEK9-207ENST00000555763 TDRD9Q8NDG6 1382 aaKnown RBP11.37□□□□□ -0.59
NEK9-207ENST00000555763 PPRC1Q5VV67 1664 aaKnown RBP11.36□□□□□ -0.59
NEK9-207ENST00000555763 ILDR2Q71H61 639 aa11.32□□□□□ -0.6
NEK9-207ENST00000555763 C1QBPQ07021 282 aaKnown RBP11.31□□□□□ -0.6
NEK9-207ENST00000555763 SOGA1O94964 1423 aa11.31□□□□□ -0.6
NEK9-207ENST00000555763 ABCA5Q8WWZ7 1642 aa11.31□□□□□ -0.6
NEK9-207ENST00000555763 ADCY10Q96PN6 1610 aa11.29□□□□□ -0.6
NEK9-207ENST00000555763 FAM69CQ0P6D2 419 aa11.29□□□□□ -0.6
NEK9-207ENST00000555763 FGD5Q6ZNL6 1462 aa11.29□□□□□ -0.6
NEK9-207ENST00000555763 POTEHQ6S545 545 aa11.28□□□□□ -0.6
NEK9-207ENST00000555763 GRIN2AQ12879 1464 aa11.27□□□□□ -0.6
NEK9-207ENST00000555763 NUP160Q12769 1436 aa11.26□□□□□ -0.61
NEK9-207ENST00000555763 CCDC88BA6NC98 1476 aa11.26□□□□□ -0.61
NEK9-207ENST00000555763 ADAMTS12P58397 1594 aa11.26□□□□□ -0.61
NEK9-207ENST00000555763 SPATA31D1Q6ZQQ2 1576 aa11.26□□□□□ -0.61
NEK9-207ENST00000555763 TOP2BQ02880 1626 aa11.26□□□□□ -0.61
NEK9-207ENST00000555763 HOXD11P31277 338 aaPredicted RBP11.24□□□□□ -0.61
NEK9-207ENST00000555763 DISP3Q9P2K9 1392 aa11.21□□□□□ -0.61
NEK9-207ENST00000555763 PPP4R3CPQ6ZMV5 832 aa11.21□□□□□ -0.61
NEK9-207ENST00000555763 CUX1P39880 1505 aa11.18□□□□□ -0.62
NEK9-207ENST00000555763 GLI2P10070 1586 aa11.16□□□□□ -0.62
NEK9-207ENST00000555763 MAP3K4Q9Y6R4 1608 aa11.14□□□□□ -0.63
NEK9-207ENST00000555763 RUSC2Q8N2Y8 1516 aa11.14□□□□□ -0.63
NEK9-207ENST00000555763 ABCA10Q8WWZ4 1543 aa11.14□□□□□ -0.63
NEK9-207ENST00000555763 COL17A1Q9UMD9 1497 aaPredicted RBP11.13□□□□□ -0.63
NEK9-207ENST00000555763 PRG4Q92954 1404 aaPredicted RBP11.13□□□□□ -0.63
NEK9-207ENST00000555763 KIF21BO75037 1637 aa11.12□□□□□ -0.63
NEK9-207ENST00000555763 NCBP3Q53F19 620 aaKnown RBP11.1□□□□□ -0.63
NEK9-207ENST00000555763 PCF11O94913 1555 aaKnown RBP11.1□□□□□ -0.63
NEK9-207ENST00000555763 CUL7Q14999 1698 aa11.09□□□□□ -0.63
NEK9-207ENST00000555763 ADAMTSL3P82987 1691 aa11.08□□□□□ -0.64
NEK9-207ENST00000555763 NPM1P06748 294 aaKnown RBP eCLIP11.07□□□□□ -0.64
NEK9-207ENST00000555763 SLC24A1O60721 1099 aa11.04□□□□□ -0.64
NEK9-207ENST00000555763 FHAD1B1AJZ9 1412 aa11.03□□□□□ -0.64
NEK9-207ENST00000555763 TEX14Q8IWB6 1497 aa11.02□□□□□ -0.65
NEK9-207ENST00000555763 PTPRMP28827 1452 aa11□□□□□ -0.65
NEK9-207ENST00000555763 ERICH3Q5RHP9 1530 aa11□□□□□ -0.65
NEK9-207ENST00000555763 NPM3O75607 178 aaKnown RBP11□□□□□ -0.65
NEK9-207ENST00000555763 PLB1Q6P1J6 1458 aa10.99□□□□□ -0.65
NEK9-207ENST00000555763 KIAA0586Q9BVV6 1533 aa10.99□□□□□ -0.65
NEK9-207ENST00000555763 ABCC2Q92887 1545 aa10.98□□□□□ -0.65
NEK9-207ENST00000555763 ASXL2Q76L83 1435 aa10.97□□□□□ -0.65
NEK9-207ENST00000555763 BCORL1Q5H9F3 1711 aa10.97□□□□□ -0.65
NEK9-207ENST00000555763 MADDQ8WXG6 1647 aa10.96□□□□□ -0.65
NEK9-207ENST00000555763 ZBTB22O15209 634 aa10.96□□□□□ -0.65
NEK9-207ENST00000555763 CERKQ8TCT0 537 aa10.96□□□□□ -0.65
NEK9-207ENST00000555763 JPH4Q96JJ6 628 aa10.96□□□□□ -0.65
NEK9-207ENST00000555763 RNF216Q9NWF9 866 aaPredicted RBP10.95□□□□□ -0.66
NEK9-207ENST00000555763 EPRSP07814 1512 aaKnown RBP10.94□□□□□ -0.66
NEK9-207ENST00000555763 CFAP43Q8NDM7 1665 aa10.93□□□□□ -0.66
NEK9-207ENST00000555763 RIMS1Q86UR5 1692 aaKnown RBP10.92□□□□□ -0.66
NEK9-207ENST00000555763 ZCCHC11Q5TAX3 1644 aaKnown RBP10.91□□□□□ -0.66
NEK9-207ENST00000555763 BIVM-ERCC5R4GMW8 1640 aa10.91□□□□□ -0.66
NEK9-207ENST00000555763 UHRF1BP1LA0JNW5 1464 aa10.87□□□□□ -0.67
NEK9-207ENST00000555763 CNKSR2Q8WXI2 1034 aa10.87□□□□□ -0.67
NEK9-207ENST00000555763 STRCQ7RTU9 1775 aa10.86□□□□□ -0.67
NEK9-207ENST00000555763 MAGI3Q5TCQ9 1506 aa10.84□□□□□ -0.67
NEK9-207ENST00000555763 KDM5BQ9UGL1 1544 aa10.84□□□□□ -0.67
NEK9-207ENST00000555763 RTN4Q9NQC3 1192 aaKnown RBP10.83□□□□□ -0.68
NEK9-207ENST00000555763 WRNQ14191 1432 aaPredicted RBP eCLIP10.83□□□□□ -0.68
NEK9-207ENST00000555763 PREX1Q8TCU6 1659 aa10.82□□□□□ -0.68
NEK9-207ENST00000555763 PTPRGP23470 1445 aa10.81□□□□□ -0.68
NEK9-207ENST00000555763 ARAP3Q8WWN8 1544 aa10.79□□□□□ -0.68
NEK9-207ENST00000555763 FER1L4A9Z1Z3 1794 aa10.78□□□□□ -0.68
NEK9-207ENST00000555763 HSPA2P54652 639 aa10.78□□□□□ -0.68
NEK9-207ENST00000555763 AMER1Q5JTC6 1135 aaPredicted RBP10.78□□□□□ -0.68
NEK9-207ENST00000555763 IQSEC2Q5JU85 1478 aa10.78□□□□□ -0.68
NEK9-207ENST00000555763 MED1Q15648 1581 aaPredicted RBP10.77□□□□□ -0.68
NEK9-207ENST00000555763 WDR7Q9Y4E6 1490 aa10.77□□□□□ -0.69
NEK9-207ENST00000555763 FRMPD1Q5SYB0 1578 aa10.75□□□□□ -0.69
NEK9-207ENST00000555763 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.75□□□□□ -0.69
NEK9-207ENST00000555763 LTBP4Q8N2S1 1624 aa10.75□□□□□ -0.69
NEK9-207ENST00000555763 TNIKQ9UKE5 1360 aa10.75□□□□□ -0.69
NEK9-207ENST00000555763 UACAQ9BZF9 1416 aa10.75□□□□□ -0.69
NEK9-207ENST00000555763 TTC37Q6PGP7 1564 aa10.74□□□□□ -0.69
NEK9-207ENST00000555763 SIGLEC1Q9BZZ2 1709 aa10.74□□□□□ -0.69
NEK9-207ENST00000555763 ARHGEF40Q8TER5 1519 aa10.74□□□□□ -0.69
NEK9-207ENST00000555763 CD109Q6YHK3 1445 aa10.72□□□□□ -0.69
NEK9-207ENST00000555763 IQGAP2Q13576 1575 aa10.7□□□□□ -0.7
NEK9-207ENST00000555763 SETD1BQ9UPS6 1966 aaKnown RBP10.7□□□□□ -0.7
NEK9-207ENST00000555763 CARMIL2Q6F5E8 1435 aa10.69□□□□□ -0.7
NEK9-207ENST00000555763 RICTORQ6R327 1708 aa10.68□□□□□ -0.7
NEK9-207ENST00000555763 FOXD4L1Q9NU39 408 aa10.67□□□□□ -0.7
NEK9-207ENST00000555763 DISP1Q96F81 1524 aa10.67□□□□□ -0.7
NEK9-207ENST00000555763 YEATS2Q9ULM3 1422 aa10.67□□□□□ -0.7
NEK9-207ENST00000555763 ABCA9Q8IUA7 1624 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 1071 ms