RNA–Protein interactions for RNA: ENST00000555176.5

HNRNPC-217, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-217ENST00000555176 NISCHQ9Y2I1 1504 aa6.28□□□□□ -1.4
HNRNPC-217ENST00000555176 C7P10643 843 aa6.27□□□□□ -1.41
HNRNPC-217ENST00000555176 CDAN1Q8IWY9 1227 aa6.27□□□□□ -1.41
HNRNPC-217ENST00000555176 METRNQ9UJH8 293 aa6.27□□□□□ -1.41
HNRNPC-217ENST00000555176 SLC39A7Q92504 469 aa6.26□□□□□ -1.41
HNRNPC-217ENST00000555176 SCUBE2Q9NQ36 999 aa6.25□□□□□ -1.41
HNRNPC-217ENST00000555176 ASTLQ6HA08 431 aaPredicted RBP6.24□□□□□ -1.41
HNRNPC-217ENST00000555176 CUX2O14529 1486 aa6.22□□□□□ -1.41
HNRNPC-217ENST00000555176 PAK3O75914 559 aaPredicted RBP6.21□□□□□ -1.42
HNRNPC-217ENST00000555176 ATMINO43313 823 aaPredicted RBP6.2□□□□□ -1.42
HNRNPC-217ENST00000555176 PHF12Q96QT6 1004 aa6.2□□□□□ -1.42
HNRNPC-217ENST00000555176 CECR2Q9BXF3 1484 aa6.18□□□□□ -1.42
HNRNPC-217ENST00000555176 MMRN1Q13201 1228 aa6.18□□□□□ -1.42
HNRNPC-217ENST00000555176 CREBZFQ9NS37 354 aa6.18□□□□□ -1.42
HNRNPC-217ENST00000555176 SPNS2Q8IVW8 549 aa6.14□□□□□ -1.43
HNRNPC-217ENST00000555176 MS4A3Q96HJ5 214 aa6.11□□□□□ -1.43
HNRNPC-217ENST00000555176 POTEFA5A3E0 1075 aa6.09□□□□□ -1.43
HNRNPC-217ENST00000555176 STAG3Q9UJ98 1225 aa6.09□□□□□ -1.43
HNRNPC-217ENST00000555176 NPM1P06748 294 aaKnown RBP eCLIP6.08□□□□□ -1.44
HNRNPC-217ENST00000555176 ATN1P54259 1190 aaPredicted RBP6.08□□□□□ -1.44
HNRNPC-217ENST00000555176 ST18O60284 1047 aa6.07□□□□□ -1.44
HNRNPC-217ENST00000555176 CC2D2AQ9P2K1 1620 aa6.03□□□□□ -1.44
HNRNPC-217ENST00000555176 SOCS7O14512 581 aa6.02□□□□□ -1.45
HNRNPC-217ENST00000555176 MNX1P50219 401 aaPredicted RBP6.01□□□□□ -1.45
HNRNPC-217ENST00000555176 FKBP8Q14318 412 aa6.01□□□□□ -1.45
HNRNPC-217ENST00000555176 RB1CC1Q8TDY2 1594 aa6□□□□□ -1.45
HNRNPC-217ENST00000555176 LMTK3Q96Q04 1460 aa5.99□□□□□ -1.45
HNRNPC-217ENST00000555176 TMEM121BQ9BXQ6 578 aaPredicted RBP5.99□□□□□ -1.45
HNRNPC-217ENST00000555176 BMP2KQ9NSY1 1161 aaPredicted RBP5.99□□□□□ -1.45
HNRNPC-217ENST00000555176 SEC24BO95487 1268 aa5.98□□□□□ -1.45
HNRNPC-217ENST00000555176 SLAIN1Q8ND83 568 aa5.98□□□□□ -1.45
HNRNPC-217ENST00000555176 COLQQ9Y215 455 aaPredicted RBP5.97□□□□□ -1.45
HNRNPC-217ENST00000555176 TIE1P35590 1138 aa5.96□□□□□ -1.46
HNRNPC-217ENST00000555176 KIF12Q96FN5 646 aa5.94□□□□□ -1.46
HNRNPC-217ENST00000555176 CCDC61Q9Y6R9 512 aa5.93□□□□□ -1.46
HNRNPC-217ENST00000555176 IER5LQ5T953 404 aa5.92□□□□□ -1.46
HNRNPC-217ENST00000555176 TSPYL2Q9H2G4 693 aaPredicted RBP5.91□□□□□ -1.46
HNRNPC-217ENST00000555176 TRPC6Q9Y210 931 aa5.91□□□□□ -1.46
HNRNPC-217ENST00000555176 ERCC6Q03468 1493 aa5.9□□□□□ -1.46
HNRNPC-217ENST00000555176 SNPHO15079 494 aa5.9□□□□□ -1.46
HNRNPC-217ENST00000555176 SPDYE4A6NLX3 237 aa5.89□□□□□ -1.47
HNRNPC-217ENST00000555176 TTLL13PA6NNM8 815 aa5.89□□□□□ -1.47
HNRNPC-217ENST00000555176 FBXO3Q9UK99 471 aa5.89□□□□□ -1.47
HNRNPC-217ENST00000555176 ILDR2Q71H61 639 aa5.88□□□□□ -1.47
HNRNPC-217ENST00000555176 MARVELD3Q96A59 401 aa5.87□□□□□ -1.47
HNRNPC-217ENST00000555176 MAP3K13O43283 966 aa5.86□□□□□ -1.47
HNRNPC-217ENST00000555176 BICRAQ9NZM4 1560 aa5.85□□□□□ -1.47
HNRNPC-217ENST00000555176 FBXO41Q8TF61 875 aa5.85□□□□□ -1.47
HNRNPC-217ENST00000555176 KRTAP3-3Q9BYR6 98 aa5.85□□□□□ -1.47
HNRNPC-217ENST00000555176 KRTAP3-2Q9BYR7 98 aa5.85□□□□□ -1.47
HNRNPC-217ENST00000555176 TRIM35Q9UPQ4 493 aa5.85□□□□□ -1.47
HNRNPC-217ENST00000555176 AMER1Q5JTC6 1135 aaPredicted RBP5.84□□□□□ -1.47
HNRNPC-217ENST00000555176 CCDC180Q9P1Z9 1646 aa5.81□□□□□ -1.48
HNRNPC-217ENST00000555176 SGIP1Q9BQI5 828 aa5.8□□□□□ -1.48
HNRNPC-217ENST00000555176 EIF4G1Q04637 1599 aaKnown RBP5.8□□□□□ -1.48
HNRNPC-217ENST00000555176 PLCG2P16885 1265 aa5.79□□□□□ -1.48
HNRNPC-217ENST00000555176 EMP3P54852 163 aa5.79□□□□□ -1.48
HNRNPC-217ENST00000555176 HS3ST6Q96QI5 342 aa5.79□□□□□ -1.48
HNRNPC-217ENST00000555176 POTEB3A0JP26 581 aa5.78□□□□□ -1.48
HNRNPC-217ENST00000555176 POTEBQ6S5H4 581 aa5.78□□□□□ -1.48
HNRNPC-217ENST00000555176 UNC13AQ9UPW8 1703 aa5.78□□□□□ -1.48
HNRNPC-217ENST00000555176 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.77□□□□□ -1.49
HNRNPC-217ENST00000555176 IRX5P78411 483 aaPredicted RBP5.76□□□□□ -1.49
HNRNPC-217ENST00000555176 PROM2Q8N271 834 aa5.76□□□□□ -1.49
HNRNPC-217ENST00000555176 RIMBP3CA6NJZ7 1639 aa5.76□□□□□ -1.49
HNRNPC-217ENST00000555176 RIMBP3BA6NNM3 1639 aa5.76□□□□□ -1.49
HNRNPC-217ENST00000555176 RIMBP3Q9UFD9 1639 aa5.76□□□□□ -1.49
HNRNPC-217ENST00000555176 FAM205CA6NFA0 338 aa5.75□□□□□ -1.49
HNRNPC-217ENST00000555176 DISP3Q9P2K9 1392 aa5.75□□□□□ -1.49
HNRNPC-217ENST00000555176 RNF166Q96A37 237 aaPredicted RBP5.74□□□□□ -1.49
HNRNPC-217ENST00000555176 NACADO15069 1562 aa5.74□□□□□ -1.49
HNRNPC-217ENST00000555176 OCEL1Q9H607 264 aa5.73□□□□□ -1.49
HNRNPC-217ENST00000555176 PCDHB13Q9Y5F0 798 aa5.72□□□□□ -1.49
HNRNPC-217ENST00000555176 SHROOM4Q9ULL8 1493 aa5.71□□□□□ -1.49
HNRNPC-217ENST00000555176 PLEKHG5O94827 1062 aa5.7□□□□□ -1.5
HNRNPC-217ENST00000555176 VASPP50552 380 aaPredicted RBP5.7□□□□□ -1.5
HNRNPC-217ENST00000555176 CYB5RLQ6IPT4 315 aa5.7□□□□□ -1.5
HNRNPC-217ENST00000555176 TMEM106CQ9BVX2 250 aa5.7□□□□□ -1.5
HNRNPC-217ENST00000555176 ERCC6L2Q5T890 1561 aa5.7□□□□□ -1.5
HNRNPC-217ENST00000555176 RASEFQ8IZ41 740 aa5.69□□□□□ -1.5
HNRNPC-217ENST00000555176 RTN4Q9NQC3 1192 aaKnown RBP5.68□□□□□ -1.5
HNRNPC-217ENST00000555176 ARHGEF11O15085 1522 aa5.68□□□□□ -1.5
HNRNPC-217ENST00000555176 BAZ1AQ9NRL2 1556 aaPredicted RBP5.67□□□□□ -1.5
HNRNPC-217ENST00000555176 IFNL1Q8IU54 200 aa5.67□□□□□ -1.5
HNRNPC-217ENST00000555176 MYT1LQ9UL68 1186 aa5.66□□□□□ -1.5
HNRNPC-217ENST00000555176 KDM4FA0A1W2PPD8 638 aa5.65□□□□□ -1.5
HNRNPC-217ENST00000555176 ZBTB47Q9UFB7 747 aaPredicted RBP5.65□□□□□ -1.5
HNRNPC-217ENST00000555176 THOC2Q8NI27 1593 aaKnown RBP5.64□□□□□ -1.51
HNRNPC-217ENST00000555176 PLCD3Q8N3E9 789 aa5.63□□□□□ -1.51
HNRNPC-217ENST00000555176 C3orf67Q6ZVT6 689 aa5.62□□□□□ -1.51
HNRNPC-217ENST00000555176 KLHL34Q8N239 644 aa5.62□□□□□ -1.51
HNRNPC-217ENST00000555176 L3MBTL3Q96JM7 780 aaPredicted RBP5.61□□□□□ -1.51
HNRNPC-217ENST00000555176 PTGER2P43116 358 aa5.6□□□□□ -1.51
HNRNPC-217ENST00000555176 MIER1Q8N108 512 aa5.59□□□□□ -1.51
HNRNPC-217ENST00000555176 ERBB3P21860 1342 aa5.58□□□□□ -1.52
HNRNPC-217ENST00000555176 HOXB1P14653 301 aaPredicted RBP5.58□□□□□ -1.52
HNRNPC-217ENST00000555176 SPOCK2Q92563 424 aa5.58□□□□□ -1.52
HNRNPC-217ENST00000555176 HECW2Q9P2P5 1572 aa5.58□□□□□ -1.52
HNRNPC-217ENST00000555176 PDCD7Q8N8D1 485 aaKnown RBP5.57□□□□□ -1.52
HNRNPC-217ENST00000555176 IFNLR1Q8IU57 520 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms