RNA–Protein interactions for RNA: ENST00000554744.1

SEL1L-203, Transcript of SEL1L, ERAD E3 ligase adaptor subunit, humanhuman

TSL 3

Gene SEL1L, Length 602 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L-203ENST00000554744 PRR29P0C7W0 189 aa11.58□□□□□ -0.56
SEL1L-203ENST00000554744 ATXN8OSP0DMR3 200 aa11.57□□□□□ -0.56
SEL1L-203ENST00000554744 CCDC88BA6NC98 1476 aa11.57□□□□□ -0.56
SEL1L-203ENST00000554744 SSUH2Q9Y2M2 353 aa11.56□□□□□ -0.56
SEL1L-203ENST00000554744 POTEIP0CG38 1075 aa11.55□□□□□ -0.56
SEL1L-203ENST00000554744 CD44P16070 742 aaKnown RBP11.53□□□□□ -0.56
SEL1L-203ENST00000554744 CLCN6P51797 869 aa11.52□□□□□ -0.57
SEL1L-203ENST00000554744 LAMC3Q9Y6N6 1575 aa11.52□□□□□ -0.57
SEL1L-203ENST00000554744 CFTRP13569 1480 aa11.51□□□□□ -0.57
SEL1L-203ENST00000554744 CADPSQ9ULU8 1353 aa11.51□□□□□ -0.57
SEL1L-203ENST00000554744 DCBLD2Q96PD2 775 aa11.5□□□□□ -0.57
SEL1L-203ENST00000554744 MKRN4PQ13434 485 aaPredicted RBP11.46□□□□□ -0.57
SEL1L-203ENST00000554744 PRDM2Q13029 1718 aa11.44□□□□□ -0.58
SEL1L-203ENST00000554744 PDS5BQ9NTI5 1447 aa11.43□□□□□ -0.58
SEL1L-203ENST00000554744 NESP48681 1621 aa11.42□□□□□ -0.58
SEL1L-203ENST00000554744 FARP1Q9Y4F1 1045 aaPredicted RBP11.41□□□□□ -0.58
SEL1L-203ENST00000554744 ZBTB22O15209 634 aa11.4□□□□□ -0.58
SEL1L-203ENST00000554744 FANCD2Q9BXW9 1451 aa11.36□□□□□ -0.59
SEL1L-203ENST00000554744 CEP164Q9UPV0 1460 aa11.33□□□□□ -0.6
SEL1L-203ENST00000554744 ERCC6Q03468 1493 aa11.32□□□□□ -0.6
SEL1L-203ENST00000554744 POTEMA6NI47 508 aa11.32□□□□□ -0.6
SEL1L-203ENST00000554744 KIF21AQ7Z4S6 1674 aa11.32□□□□□ -0.6
SEL1L-203ENST00000554744 ABCC8Q09428 1581 aa11.28□□□□□ -0.6
SEL1L-203ENST00000554744 MRC2Q9UBG0 1479 aa11.28□□□□□ -0.6
SEL1L-203ENST00000554744 ZNF579Q8NAF0 562 aaKnown RBP11.28□□□□□ -0.6
SEL1L-203ENST00000554744 OTUD5Q96G74 571 aa11.28□□□□□ -0.6
SEL1L-203ENST00000554744 ZRANB1Q9UGI0 708 aa11.28□□□□□ -0.6
SEL1L-203ENST00000554744 THOC2Q8NI27 1593 aaKnown RBP11.27□□□□□ -0.61
SEL1L-203ENST00000554744 WDR62O43379 1518 aa11.25□□□□□ -0.61
SEL1L-203ENST00000554744 POTEGQ6S5H5 508 aa11.25□□□□□ -0.61
SEL1L-203ENST00000554744 DNMBPQ6XZF7 1577 aa11.24□□□□□ -0.61
SEL1L-203ENST00000554744 URB2Q14146 1524 aaKnown RBP11.22□□□□□ -0.61
SEL1L-203ENST00000554744 WRNQ14191 1432 aaPredicted RBP eCLIP11.21□□□□□ -0.61
SEL1L-203ENST00000554744 TOPBP1Q92547 1522 aa11.2□□□□□ -0.62
SEL1L-203ENST00000554744 CUX2O14529 1486 aa11.2□□□□□ -0.62
SEL1L-203ENST00000554744 GALR2O43603 387 aaPredicted RBP11.19□□□□□ -0.62
SEL1L-203ENST00000554744 TOP2BQ02880 1626 aa11.19□□□□□ -0.62
SEL1L-203ENST00000554744 CUX1P39880 1505 aa11.19□□□□□ -0.62
SEL1L-203ENST00000554744 BIVM-ERCC5R4GMW8 1640 aa11.18□□□□□ -0.62
SEL1L-203ENST00000554744 POTEB2H3BUK9 544 aa11.17□□□□□ -0.62
SEL1L-203ENST00000554744 PCDH10Q9P2E7 1040 aa11.17□□□□□ -0.62
SEL1L-203ENST00000554744 SYNJ1O43426 1573 aa11.15□□□□□ -0.62
SEL1L-203ENST00000554744 POLA1P09884 1462 aaPredicted RBP11.12□□□□□ -0.63
SEL1L-203ENST00000554744 PAK3O75914 559 aaPredicted RBP11.11□□□□□ -0.63
SEL1L-203ENST00000554744 FGD5Q6ZNL6 1462 aa11.11□□□□□ -0.63
SEL1L-203ENST00000554744 IFT140Q96RY7 1462 aa11.11□□□□□ -0.63
SEL1L-203ENST00000554744 WDR97A6NE52 1622 aa11.09□□□□□ -0.63
SEL1L-203ENST00000554744 TARBP1Q13395 1621 aaKnown RBP11.09□□□□□ -0.63
SEL1L-203ENST00000554744 ABCA10Q8WWZ4 1543 aa11.07□□□□□ -0.64
SEL1L-203ENST00000554744 SOGA1O94964 1423 aa11.07□□□□□ -0.64
SEL1L-203ENST00000554744 CREBZFQ9NS37 354 aa11.05□□□□□ -0.64
SEL1L-203ENST00000554744 TRIM41Q8WV44 630 aa11.03□□□□□ -0.64
SEL1L-203ENST00000554744 PHF12Q96QT6 1004 aa11.02□□□□□ -0.65
SEL1L-203ENST00000554744 RAD54L2Q9Y4B4 1467 aa11.01□□□□□ -0.65
SEL1L-203ENST00000554744 STAG3Q9UJ98 1225 aa11.01□□□□□ -0.65
SEL1L-203ENST00000554744 ABCA5Q8WWZ7 1642 aa10.99□□□□□ -0.65
SEL1L-203ENST00000554744 MAMSTRQ6ZN01 415 aa10.99□□□□□ -0.65
SEL1L-203ENST00000554744 PELP1Q8IZL8 1130 aaKnown RBP10.99□□□□□ -0.65
SEL1L-203ENST00000554744 METRNQ9UJH8 293 aa10.98□□□□□ -0.65
SEL1L-203ENST00000554744 KIF27Q86VH2 1401 aa10.97□□□□□ -0.65
SEL1L-203ENST00000554744 ZNF608Q9ULD9 1512 aaPredicted RBP10.97□□□□□ -0.65
SEL1L-203ENST00000554744 EIF4G3O43432 1585 aaKnown RBP10.97□□□□□ -0.65
SEL1L-203ENST00000554744 GAPVD1Q14C86 1478 aa10.96□□□□□ -0.65
SEL1L-203ENST00000554744 ERICH3Q5RHP9 1530 aa10.95□□□□□ -0.66
SEL1L-203ENST00000554744 EEA1Q15075 1411 aa10.95□□□□□ -0.66
SEL1L-203ENST00000554744 SLC39A7Q92504 469 aa10.95□□□□□ -0.66
SEL1L-203ENST00000554744 FAM163AQ96GL9 167 aaPredicted RBP10.95□□□□□ -0.66
SEL1L-203ENST00000554744 GRIN2BQ13224 1484 aa10.94□□□□□ -0.66
SEL1L-203ENST00000554744 TDRD9Q8NDG6 1382 aaKnown RBP10.94□□□□□ -0.66
SEL1L-203ENST00000554744 C7P10643 843 aa10.94□□□□□ -0.66
SEL1L-203ENST00000554744 AQRO60306 1485 aaKnown RBP eCLIP10.93□□□□□ -0.662e-8■■■■■ 35.8
SEL1L-203ENST00000554744 NPM1P06748 294 aaKnown RBP eCLIP10.92□□□□□ -0.66
SEL1L-203ENST00000554744 MAGI1Q96QZ7 1491 aaPredicted RBP10.92□□□□□ -0.66
SEL1L-203ENST00000554744 PBRM1Q86U86 1689 aa10.91□□□□□ -0.66
SEL1L-203ENST00000554744 ASTLQ6HA08 431 aaPredicted RBP10.9□□□□□ -0.66
SEL1L-203ENST00000554744 SCUBE2Q9NQ36 999 aa10.9□□□□□ -0.66
SEL1L-203ENST00000554744 IGF1RP08069 1367 aa10.89□□□□□ -0.67
SEL1L-203ENST00000554744 CUL7Q14999 1698 aa10.89□□□□□ -0.67
SEL1L-203ENST00000554744 POTEJP0CG39 1038 aa10.88□□□□□ -0.67
SEL1L-203ENST00000554744 ATMINO43313 823 aaPredicted RBP10.87□□□□□ -0.67
SEL1L-203ENST00000554744 FHAD1B1AJZ9 1412 aa10.86□□□□□ -0.67
SEL1L-203ENST00000554744 LCE2DQ5TA82 110 aaPredicted RBP10.86□□□□□ -0.67
SEL1L-203ENST00000554744 MS4A3Q96HJ5 214 aa10.86□□□□□ -0.67
SEL1L-203ENST00000554744 SYNJ2O15056 1496 aa10.86□□□□□ -0.67
SEL1L-203ENST00000554744 ADAMTS12P58397 1594 aa10.86□□□□□ -0.67
SEL1L-203ENST00000554744 SNAPC4Q5SXM2 1469 aa10.85□□□□□ -0.67
SEL1L-203ENST00000554744 RUSC2Q8N2Y8 1516 aa10.84□□□□□ -0.67
SEL1L-203ENST00000554744 PRXQ9BXM0 1461 aa10.82□□□□□ -0.68
SEL1L-203ENST00000554744 CSRNP3Q8WYN3 585 aa10.82□□□□□ -0.68
SEL1L-203ENST00000554744 CARMIL1Q5VZK9 1371 aa10.81□□□□□ -0.68
SEL1L-203ENST00000554744 GRIN2AQ12879 1464 aa10.8□□□□□ -0.68
SEL1L-203ENST00000554744 KIF21BO75037 1637 aa10.79□□□□□ -0.68
SEL1L-203ENST00000554744 RAPGEF2Q9Y4G8 1499 aa10.79□□□□□ -0.68
SEL1L-203ENST00000554744 CHMP7Q8WUX9 453 aaPredicted RBP10.77□□□□□ -0.69
SEL1L-203ENST00000554744 CHD1O14646 1710 aa10.77□□□□□ -0.69
SEL1L-203ENST00000554744 NUP160Q12769 1436 aa10.76□□□□□ -0.69
SEL1L-203ENST00000554744 ATN1P54259 1190 aaPredicted RBP10.74□□□□□ -0.69
SEL1L-203ENST00000554744 CDAN1Q8IWY9 1227 aa10.74□□□□□ -0.69
SEL1L-203ENST00000554744 MNX1P50219 401 aaPredicted RBP10.73□□□□□ -0.69
SEL1L-203ENST00000554744 GOLGA3Q08378 1498 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms