RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 PRG4Q92954 1404 aaPredicted RBP18.52■□□□□ 0.56
PNN-203ENST00000554117 KIF13AQ9H1H9 1805 aa18.51■□□□□ 0.55
PNN-203ENST00000554117 JPH4Q96JJ6 628 aa18.49■□□□□ 0.55
PNN-203ENST00000554117 KIAA0586Q9BVV6 1533 aa18.46■□□□□ 0.55
PNN-203ENST00000554117 NPM1P06748 294 aaKnown RBP eCLIP18.45■□□□□ 0.54
PNN-203ENST00000554117 CTTNBP2Q8WZ74 1663 aa18.43■□□□□ 0.54
PNN-203ENST00000554117 IGF1RP08069 1367 aa18.42■□□□□ 0.54
PNN-203ENST00000554117 IQGAP2Q13576 1575 aa18.42■□□□□ 0.54
PNN-203ENST00000554117 CARMIL1Q5VZK9 1371 aa18.41■□□□□ 0.54
PNN-203ENST00000554117 CARMIL2Q6F5E8 1435 aa18.38■□□□□ 0.53
PNN-203ENST00000554117 ADCY10Q96PN6 1610 aa18.37■□□□□ 0.53
PNN-203ENST00000554117 TSPOAP1O95153 1857 aa18.37■□□□□ 0.53
PNN-203ENST00000554117 MAPKBP1O60336 1514 aa18.33■□□□□ 0.52
PNN-203ENST00000554117 RAPGEF2Q9Y4G8 1499 aa18.31■□□□□ 0.52
PNN-203ENST00000554117 DIP2BQ9P265 1576 aa18.28■□□□□ 0.52
PNN-203ENST00000554117 PTPRGP23470 1445 aa18.26■□□□□ 0.51
PNN-203ENST00000554117 TNIKQ9UKE5 1360 aa18.25■□□□□ 0.51
PNN-203ENST00000554117 TTBK1Q5TCY1 1321 aaPredicted RBP18.24■□□□□ 0.51
PNN-203ENST00000554117 ABCC10Q5T3U5 1492 aa18.24■□□□□ 0.51
PNN-203ENST00000554117 KIAA0556O60303 1618 aa18.21■□□□□ 0.51
PNN-203ENST00000554117 FAM69CQ0P6D2 419 aa18.21■□□□□ 0.51
PNN-203ENST00000554117 UGGT2Q9NYU1 1516 aa18.2■□□□□ 0.5
PNN-203ENST00000554117 FAM9AQ8IZU1 332 aaPredicted RBP18.19■□□□□ 0.5
PNN-203ENST00000554117 KDM6BO15054 1643 aa18.19■□□□□ 0.5
PNN-203ENST00000554117 GOLGA3Q08378 1498 aa18.17■□□□□ 0.5
PNN-203ENST00000554117 ABCC2Q92887 1545 aa18.17■□□□□ 0.5
PNN-203ENST00000554117 ZCCHC11Q5TAX3 1644 aaKnown RBP18.16■□□□□ 0.5
PNN-203ENST00000554117 UHRF1BP1LA0JNW5 1464 aa18.14■□□□□ 0.5
PNN-203ENST00000554117 DISP1Q96F81 1524 aa18.14■□□□□ 0.49
PNN-203ENST00000554117 UACAQ9BZF9 1416 aa18.13■□□□□ 0.49
PNN-203ENST00000554117 PLB1Q6P1J6 1458 aa18.13■□□□□ 0.49
PNN-203ENST00000554117 GLI2P10070 1586 aa18.08■□□□□ 0.49
PNN-203ENST00000554117 ASXL2Q76L83 1435 aa18.07■□□□□ 0.48
PNN-203ENST00000554117 MAP3K4Q9Y6R4 1608 aa18.05■□□□□ 0.48
PNN-203ENST00000554117 KDM5BQ9UGL1 1544 aa18.04■□□□□ 0.48
PNN-203ENST00000554117 PPRC1Q5VV67 1664 aaKnown RBP18.04■□□□□ 0.48
PNN-203ENST00000554117 CFAP43Q8NDM7 1665 aa18.04■□□□□ 0.48
PNN-203ENST00000554117 PRXQ9BXM0 1461 aa18.04■□□□□ 0.48
PNN-203ENST00000554117 EEA1Q15075 1411 aa18.04■□□□□ 0.48
PNN-203ENST00000554117 TEX14Q8IWB6 1497 aa18.01■□□□□ 0.47
PNN-203ENST00000554117 ABCA8O94911 1581 aa17.97■□□□□ 0.47
PNN-203ENST00000554117 EPRSP07814 1512 aaKnown RBP17.97■□□□□ 0.47
PNN-203ENST00000554117 CSRNP3Q8WYN3 585 aa17.96■□□□□ 0.47
PNN-203ENST00000554117 WDR7Q9Y4E6 1490 aa17.95■□□□□ 0.46
PNN-203ENST00000554117 SAMD9Q5K651 1589 aa17.95■□□□□ 0.46
PNN-203ENST00000554117 RAPGEF6Q8TEU7 1601 aa17.93■□□□□ 0.46
PNN-203ENST00000554117 KIF21BO75037 1637 aa17.92■□□□□ 0.46
PNN-203ENST00000554117 P3H3Q8IVL6 736 aa17.85■□□□□ 0.45
PNN-203ENST00000554117 EFCAB5A4FU69 1503 aa17.84■□□□□ 0.45
PNN-203ENST00000554117 KCNH8Q96L42 1107 aa17.84■□□□□ 0.45
PNN-203ENST00000554117 CD109Q6YHK3 1445 aa17.82■□□□□ 0.44
PNN-203ENST00000554117 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.82■□□□□ 0.44
PNN-203ENST00000554117 HNRNPUL2Q1KMD3 747 aaKnown RBP17.82■□□□□ 0.44
PNN-203ENST00000554117 ABCA9Q8IUA7 1624 aa17.8■□□□□ 0.44
PNN-203ENST00000554117 RANGAP1P46060 587 aaPredicted RBP17.8■□□□□ 0.44
PNN-203ENST00000554117 MAGI3Q5TCQ9 1506 aa17.8■□□□□ 0.44
PNN-203ENST00000554117 CFAP74Q9C0B2 1584 aa17.77■□□□□ 0.44
PNN-203ENST00000554117 ATP10BO94823 1461 aa17.75■□□□□ 0.43
PNN-203ENST00000554117 ARID3CA6NKF2 412 aa17.75■□□□□ 0.43
PNN-203ENST00000554117 FHOD3Q2V2M9 1422 aa17.72■□□□□ 0.43
PNN-203ENST00000554117 UBTFP17480 764 aaKnown RBP17.72■□□□□ 0.43
PNN-203ENST00000554117 ADGRL1O94910 1474 aa17.71■□□□□ 0.43
PNN-203ENST00000554117 HECW1Q76N89 1606 aa17.7■□□□□ 0.42
PNN-203ENST00000554117 PHLDB1Q86UU1 1377 aa17.69■□□□□ 0.42
PNN-203ENST00000554117 NUP153P49790 1475 aaKnown RBP17.68■□□□□ 0.42
PNN-203ENST00000554117 MYO5CQ9NQX4 1742 aa17.67■□□□□ 0.42
PNN-203ENST00000554117 PLEKHD1A6NEE1 506 aa17.67■□□□□ 0.42
PNN-203ENST00000554117 COL17A1Q9UMD9 1497 aaPredicted RBP17.67■□□□□ 0.42
PNN-203ENST00000554117 ARAP3Q8WWN8 1544 aa17.67■□□□□ 0.42
PNN-203ENST00000554117 KDM4FA0A1W2PPD8 638 aa17.66■□□□□ 0.42
PNN-203ENST00000554117 NEO1Q92859 1461 aa17.65■□□□□ 0.42
PNN-203ENST00000554117 FMN1Q68DA7 1419 aa17.64■□□□□ 0.42
PNN-203ENST00000554117 CHIC1Q5VXU3 224 aa17.64■□□□□ 0.41
PNN-203ENST00000554117 EHMT2Q96KQ7 1210 aa17.64■□□□□ 0.41
PNN-203ENST00000554117 RICTORQ6R327 1708 aa17.61■□□□□ 0.41
PNN-203ENST00000554117 ATP1B4Q9UN42 357 aaPredicted RBP17.6■□□□□ 0.41
PNN-203ENST00000554117 CDK11AQ9UQ88 783 aaPredicted RBP17.58■□□□□ 0.4
PNN-203ENST00000554117 KIF14Q15058 1648 aa17.58■□□□□ 0.4
PNN-203ENST00000554117 TTC37Q6PGP7 1564 aa17.57■□□□□ 0.4
PNN-203ENST00000554117 LRRIQ1Q96JM4 1722 aa17.57■□□□□ 0.4
PNN-203ENST00000554117 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.57■□□□□ 0.4
PNN-203ENST00000554117 CDK13Q14004 1512 aaKnown RBP17.56■□□□□ 0.4
PNN-203ENST00000554117 FANCAO15360 1455 aa17.54■□□□□ 0.4
PNN-203ENST00000554117 BCORL1Q5H9F3 1711 aa17.53■□□□□ 0.4
PNN-203ENST00000554117 ARHGAP35Q9NRY4 1499 aa17.53■□□□□ 0.4
PNN-203ENST00000554117 CLIP1P30622 1438 aa17.52■□□□□ 0.4
PNN-203ENST00000554117 DENND4BO75064 1496 aaPredicted RBP17.51■□□□□ 0.39
PNN-203ENST00000554117 FRMPD1Q5SYB0 1578 aa17.51■□□□□ 0.39
PNN-203ENST00000554117 ARHGEF40Q8TER5 1519 aa17.5■□□□□ 0.39
PNN-203ENST00000554117 AKNAQ7Z591 1439 aa17.49■□□□□ 0.39
PNN-203ENST00000554117 ADAMTSL3P82987 1691 aa17.48■□□□□ 0.39
PNN-203ENST00000554117 CCDC18Q5T9S5 1454 aa17.48■□□□□ 0.39
PNN-203ENST00000554117 HECW2Q9P2P5 1572 aa17.48■□□□□ 0.39
PNN-203ENST00000554117 ARID4BQ4LE39 1312 aaPredicted RBP17.47■□□□□ 0.39
PNN-203ENST00000554117 RAPGEF3O95398 923 aa17.47■□□□□ 0.39
PNN-203ENST00000554117 FER1L4A9Z1Z3 1794 aa17.46■□□□□ 0.39
PNN-203ENST00000554117 RIMS1Q86UR5 1692 aaKnown RBP17.46■□□□□ 0.39
PNN-203ENST00000554117 PCF11O94913 1555 aaKnown RBP17.46■□□□□ 0.39
PNN-203ENST00000554117 CDC42BPBQ9Y5S2 1711 aa17.46■□□□□ 0.39
PNN-203ENST00000554117 ZMYM4Q5VZL5 1548 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms