RNA–Protein interactions for RNA: ENST00000554078.1

AC004858.1-201, humanhuman

BASIC

Gene AC004858.1, Length 242 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004858.1-201ENST00000554078 SHROOM2Q13796 1616 aa16.99■□□□□ 0.31
AC004858.1-201ENST00000554078 KIAA0586Q9BVV6 1533 aa16.96■□□□□ 0.31
AC004858.1-201ENST00000554078 CUL7Q14999 1698 aa16.93■□□□□ 0.3
AC004858.1-201ENST00000554078 RUSC2Q8N2Y8 1516 aa16.91■□□□□ 0.3
AC004858.1-201ENST00000554078 NPM1P06748 294 aaKnown RBP eCLIP16.89■□□□□ 0.29
AC004858.1-201ENST00000554078 RAPGEF2Q9Y4G8 1499 aa16.83■□□□□ 0.28
AC004858.1-201ENST00000554078 PTPRGP23470 1445 aa16.81■□□□□ 0.28
AC004858.1-201ENST00000554078 TTBK1Q5TCY1 1321 aaPredicted RBP16.81■□□□□ 0.28
AC004858.1-201ENST00000554078 CARMIL2Q6F5E8 1435 aa16.8■□□□□ 0.28
AC004858.1-201ENST00000554078 TNIKQ9UKE5 1360 aa16.78■□□□□ 0.28
AC004858.1-201ENST00000554078 FAM69CQ0P6D2 419 aa16.77■□□□□ 0.28
AC004858.1-201ENST00000554078 IQGAP2Q13576 1575 aa16.75■□□□□ 0.27
AC004858.1-201ENST00000554078 ADCY10Q96PN6 1610 aa16.71■□□□□ 0.27
AC004858.1-201ENST00000554078 DISP1Q96F81 1524 aa16.7■□□□□ 0.26
AC004858.1-201ENST00000554078 ABCC10Q5T3U5 1492 aa16.7■□□□□ 0.26
AC004858.1-201ENST00000554078 CSRNP3Q8WYN3 585 aa16.7■□□□□ 0.26
AC004858.1-201ENST00000554078 PRXQ9BXM0 1461 aa16.69■□□□□ 0.26
AC004858.1-201ENST00000554078 MAPKBP1O60336 1514 aa16.69■□□□□ 0.26
AC004858.1-201ENST00000554078 UGGT2Q9NYU1 1516 aa16.68■□□□□ 0.26
AC004858.1-201ENST00000554078 UACAQ9BZF9 1416 aa16.66■□□□□ 0.26
AC004858.1-201ENST00000554078 UHRF1BP1LA0JNW5 1464 aa16.64■□□□□ 0.25
AC004858.1-201ENST00000554078 ABCC2Q92887 1545 aa16.64■□□□□ 0.25
AC004858.1-201ENST00000554078 KIF13AQ9H1H9 1805 aa16.6■□□□□ 0.25
AC004858.1-201ENST00000554078 GOLGA3Q08378 1498 aa16.6■□□□□ 0.25
AC004858.1-201ENST00000554078 ASXL2Q76L83 1435 aa16.59■□□□□ 0.25
AC004858.1-201ENST00000554078 FAM9AQ8IZU1 332 aaPredicted RBP16.58■□□□□ 0.24
AC004858.1-201ENST00000554078 PLB1Q6P1J6 1458 aa16.58■□□□□ 0.24
AC004858.1-201ENST00000554078 DIP2BQ9P265 1576 aa16.58■□□□□ 0.24
AC004858.1-201ENST00000554078 KIAA0556O60303 1618 aa16.57■□□□□ 0.24
AC004858.1-201ENST00000554078 EEA1Q15075 1411 aa16.57■□□□□ 0.24
AC004858.1-201ENST00000554078 KDM5BQ9UGL1 1544 aa16.55■□□□□ 0.24
AC004858.1-201ENST00000554078 P3H3Q8IVL6 736 aa16.55■□□□□ 0.24
AC004858.1-201ENST00000554078 CHIC1Q5VXU3 224 aa16.53■□□□□ 0.24
AC004858.1-201ENST00000554078 AEBP2Q6ZN18 517 aaPredicted RBP16.53■□□□□ 0.24
AC004858.1-201ENST00000554078 CTTNBP2Q8WZ74 1663 aa16.52■□□□□ 0.23
AC004858.1-201ENST00000554078 RANGAP1P46060 587 aaPredicted RBP16.48■□□□□ 0.23
AC004858.1-201ENST00000554078 GLI2P10070 1586 aa16.47■□□□□ 0.23
AC004858.1-201ENST00000554078 EPRSP07814 1512 aaKnown RBP16.47■□□□□ 0.23
AC004858.1-201ENST00000554078 KCNH8Q96L42 1107 aa16.47■□□□□ 0.23
AC004858.1-201ENST00000554078 ABCA8O94911 1581 aa16.44■□□□□ 0.22
AC004858.1-201ENST00000554078 ZCCHC11Q5TAX3 1644 aaKnown RBP16.44■□□□□ 0.22
AC004858.1-201ENST00000554078 ARID3CA6NKF2 412 aa16.43■□□□□ 0.22
AC004858.1-201ENST00000554078 WDR7Q9Y4E6 1490 aa16.42■□□□□ 0.22
AC004858.1-201ENST00000554078 TSPOAP1O95153 1857 aa16.41■□□□□ 0.22
AC004858.1-201ENST00000554078 KDM6BO15054 1643 aa16.41■□□□□ 0.22
AC004858.1-201ENST00000554078 UBTFP17480 764 aaKnown RBP16.39■□□□□ 0.21
AC004858.1-201ENST00000554078 EHMT2Q96KQ7 1210 aa16.39■□□□□ 0.21
AC004858.1-201ENST00000554078 ATP10BO94823 1461 aa16.38■□□□□ 0.21
AC004858.1-201ENST00000554078 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.37■□□□□ 0.21
AC004858.1-201ENST00000554078 HNRNPUL2Q1KMD3 747 aaKnown RBP16.37■□□□□ 0.21
AC004858.1-201ENST00000554078 SAMD9Q5K651 1589 aa16.37■□□□□ 0.21
AC004858.1-201ENST00000554078 CD109Q6YHK3 1445 aa16.36■□□□□ 0.21
AC004858.1-201ENST00000554078 TEX14Q8IWB6 1497 aa16.36■□□□□ 0.21
AC004858.1-201ENST00000554078 KIF21BO75037 1637 aa16.34■□□□□ 0.21
AC004858.1-201ENST00000554078 MAP3K4Q9Y6R4 1608 aa16.34■□□□□ 0.21
AC004858.1-201ENST00000554078 FHOD3Q2V2M9 1422 aa16.34■□□□□ 0.21
AC004858.1-201ENST00000554078 COL17A1Q9UMD9 1497 aaPredicted RBP16.34■□□□□ 0.21
AC004858.1-201ENST00000554078 PPRC1Q5VV67 1664 aaKnown RBP16.33■□□□□ 0.2
AC004858.1-201ENST00000554078 KDM4FA0A1W2PPD8 638 aa16.31■□□□□ 0.2
AC004858.1-201ENST00000554078 MAGI3Q5TCQ9 1506 aa16.29■□□□□ 0.2
AC004858.1-201ENST00000554078 PLEKHD1A6NEE1 506 aa16.29■□□□□ 0.2
AC004858.1-201ENST00000554078 NUP153P49790 1475 aaKnown RBP16.28■□□□□ 0.2
AC004858.1-201ENST00000554078 RAPGEF6Q8TEU7 1601 aa16.27■□□□□ 0.2
AC004858.1-201ENST00000554078 EFCAB5A4FU69 1503 aa16.26■□□□□ 0.19
AC004858.1-201ENST00000554078 ATP1B4Q9UN42 357 aaPredicted RBP16.23■□□□□ 0.19
AC004858.1-201ENST00000554078 CFAP43Q8NDM7 1665 aa16.23■□□□□ 0.19
AC004858.1-201ENST00000554078 PHLDB1Q86UU1 1377 aa16.22■□□□□ 0.19
AC004858.1-201ENST00000554078 FMN1Q68DA7 1419 aa16.19■□□□□ 0.18
AC004858.1-201ENST00000554078 ARHGAP35Q9NRY4 1499 aa16.18■□□□□ 0.18
AC004858.1-201ENST00000554078 ARAP3Q8WWN8 1544 aa16.18■□□□□ 0.18
AC004858.1-201ENST00000554078 ABCA9Q8IUA7 1624 aa16.17■□□□□ 0.18
AC004858.1-201ENST00000554078 RAPGEF3O95398 923 aa16.17■□□□□ 0.18
AC004858.1-201ENST00000554078 CDK11AQ9UQ88 783 aaPredicted RBP16.15■□□□□ 0.18
AC004858.1-201ENST00000554078 NEO1Q92859 1461 aa16.14■□□□□ 0.17
AC004858.1-201ENST00000554078 ADGRL1O94910 1474 aa16.12■□□□□ 0.17
AC004858.1-201ENST00000554078 CDK13Q14004 1512 aaKnown RBP16.1■□□□□ 0.17
AC004858.1-201ENST00000554078 AKNAQ7Z591 1439 aa16.08■□□□□ 0.16
AC004858.1-201ENST00000554078 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.08■□□□□ 0.16
AC004858.1-201ENST00000554078 FANCAO15360 1455 aa16.06■□□□□ 0.16
AC004858.1-201ENST00000554078 PLCH2O75038 1416 aa16.05■□□□□ 0.16
AC004858.1-201ENST00000554078 EFCAB2Q5VUJ9 269 aa16.05■□□□□ 0.16
AC004858.1-201ENST00000554078 HECW1Q76N89 1606 aa16.05■□□□□ 0.16
AC004858.1-201ENST00000554078 DENND4BO75064 1496 aaPredicted RBP16.04■□□□□ 0.16
AC004858.1-201ENST00000554078 CASKIN1Q8WXD9 1431 aa16.02■□□□□ 0.16
AC004858.1-201ENST00000554078 CLIP1P30622 1438 aa16.02■□□□□ 0.15
AC004858.1-201ENST00000554078 TROQ12816 1431 aaPredicted RBP16.02■□□□□ 0.15
AC004858.1-201ENST00000554078 ARID4BQ4LE39 1312 aaPredicted RBP16.01■□□□□ 0.15
AC004858.1-201ENST00000554078 TTC37Q6PGP7 1564 aa16■□□□□ 0.15
AC004858.1-201ENST00000554078 SCAPERQ9BY12 1400 aa15.99■□□□□ 0.15
AC004858.1-201ENST00000554078 FRMPD1Q5SYB0 1578 aa15.96■□□□□ 0.15
AC004858.1-201ENST00000554078 CCDC18Q5T9S5 1454 aa15.96■□□□□ 0.14
AC004858.1-201ENST00000554078 CFAP74Q9C0B2 1584 aa15.96■□□□□ 0.14
AC004858.1-201ENST00000554078 AFAP1Q8N556 730 aa15.93■□□□□ 0.14
AC004858.1-201ENST00000554078 MAGI2Q86UL8 1455 aa15.92■□□□□ 0.14
AC004858.1-201ENST00000554078 FYCO1Q9BQS8 1478 aa15.92■□□□□ 0.14
AC004858.1-201ENST00000554078 KIF14Q15058 1648 aa15.92■□□□□ 0.14
AC004858.1-201ENST00000554078 POGZQ7Z3K3 1410 aa15.92■□□□□ 0.14
AC004858.1-201ENST00000554078 PCF11O94913 1555 aaKnown RBP15.92■□□□□ 0.14
AC004858.1-201ENST00000554078 YEATS2Q9ULM3 1422 aa15.91■□□□□ 0.14
AC004858.1-201ENST00000554078 RICTORQ6R327 1708 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms