RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 GRIN2AQ12879 1464 aa18.88■□□□□ 0.61
NEK9-202ENST00000553823 CTTNBP2Q8WZ74 1663 aa18.86■□□□□ 0.61
NEK9-202ENST00000553823 CEP162Q5TB80 1403 aa18.84■□□□□ 0.61
NEK9-202ENST00000553823 FBLN2P98095 1184 aa18.84■□□□□ 0.61
NEK9-202ENST00000553823 CHD1O14646 1710 aa18.81■□□□□ 0.6
NEK9-202ENST00000553823 CLIP1P30622 1438 aa18.78■□□□□ 0.6
NEK9-202ENST00000553823 NUP160Q12769 1436 aa18.76■□□□□ 0.59
NEK9-202ENST00000553823 RANGAP1P46060 587 aaPredicted RBP18.76■□□□□ 0.59
NEK9-202ENST00000553823 CEP170Q5SW79 1584 aa18.76■□□□□ 0.59
NEK9-202ENST00000553823 KIAA0586Q9BVV6 1533 aa18.74■□□□□ 0.59
NEK9-202ENST00000553823 IQGAP2Q13576 1575 aa18.74■□□□□ 0.59
NEK9-202ENST00000553823 ARHGAP35Q9NRY4 1499 aa18.68■□□□□ 0.58
NEK9-202ENST00000553823 EFCAB5A4FU69 1503 aa18.67■□□□□ 0.58
NEK9-202ENST00000553823 UGGT2Q9NYU1 1516 aa18.65■□□□□ 0.58
NEK9-202ENST00000553823 ARAP1Q96P48 1450 aa18.63■□□□□ 0.57
NEK9-202ENST00000553823 SAMD9Q5K651 1589 aa18.63■□□□□ 0.57
NEK9-202ENST00000553823 JPH4Q96JJ6 628 aa18.6■□□□□ 0.57
NEK9-202ENST00000553823 P3H3Q8IVL6 736 aa18.59■□□□□ 0.57
NEK9-202ENST00000553823 CLASP1Q7Z460 1538 aa18.59■□□□□ 0.57
NEK9-202ENST00000553823 VPS8Q8N3P4 1428 aa18.57■□□□□ 0.56
NEK9-202ENST00000553823 FHOD3Q2V2M9 1422 aa18.57■□□□□ 0.56
NEK9-202ENST00000553823 DISP1Q96F81 1524 aa18.55■□□□□ 0.56
NEK9-202ENST00000553823 PLPPR3Q6T4P5 718 aa18.55■□□□□ 0.56
NEK9-202ENST00000553823 OSCARQ8IYS5 282 aa18.55■□□□□ 0.56
NEK9-202ENST00000553823 KIAA0556O60303 1618 aa18.55■□□□□ 0.56
NEK9-202ENST00000553823 SHROOM2Q13796 1616 aa18.55■□□□□ 0.56
NEK9-202ENST00000553823 CARMIL2Q6F5E8 1435 aa18.53■□□□□ 0.56
NEK9-202ENST00000553823 PRG4Q92954 1404 aaPredicted RBP18.5■□□□□ 0.55
NEK9-202ENST00000553823 FMN1Q68DA7 1419 aa18.49■□□□□ 0.55
NEK9-202ENST00000553823 PCF11O94913 1555 aaKnown RBP18.42■□□□□ 0.54
NEK9-202ENST00000553823 POTEDQ86YR6 584 aa18.42■□□□□ 0.54
NEK9-202ENST00000553823 CASKIN1Q8WXD9 1431 aa18.41■□□□□ 0.54
NEK9-202ENST00000553823 FYCO1Q9BQS8 1478 aa18.4■□□□□ 0.54
NEK9-202ENST00000553823 ERCC6L2Q5T890 1561 aa18.4■□□□□ 0.54
NEK9-202ENST00000553823 APLP2Q06481 763 aa18.39■□□□□ 0.53
NEK9-202ENST00000553823 TTBK1Q5TCY1 1321 aaPredicted RBP18.39■□□□□ 0.53
NEK9-202ENST00000553823 PTPRGP23470 1445 aa18.37■□□□□ 0.53
NEK9-202ENST00000553823 ATP1B4Q9UN42 357 aaPredicted RBP18.36■□□□□ 0.53
NEK9-202ENST00000553823 MSH5O43196 834 aa18.35■□□□□ 0.53
NEK9-202ENST00000553823 HECW1Q76N89 1606 aa18.34■□□□□ 0.53
NEK9-202ENST00000553823 RAPGEF6Q8TEU7 1601 aa18.34■□□□□ 0.53
NEK9-202ENST00000553823 MAP3K1Q13233 1512 aa18.32■□□□□ 0.52
NEK9-202ENST00000553823 PLB1Q6P1J6 1458 aa18.31■□□□□ 0.52
NEK9-202ENST00000553823 ABCA8O94911 1581 aa18.3■□□□□ 0.52
NEK9-202ENST00000553823 TIAM1Q13009 1591 aa18.3■□□□□ 0.52
NEK9-202ENST00000553823 LRRIQ1Q96JM4 1722 aa18.29■□□□□ 0.52
NEK9-202ENST00000553823 CFAP43Q8NDM7 1665 aa18.29■□□□□ 0.52
NEK9-202ENST00000553823 PPARGC1BQ86YN6 1023 aaKnown RBP18.29■□□□□ 0.52
NEK9-202ENST00000553823 PPP6R1Q9UPN7 881 aa18.28■□□□□ 0.52
NEK9-202ENST00000553823 CCDC18Q5T9S5 1454 aa18.27■□□□□ 0.52
NEK9-202ENST00000553823 NUP153P49790 1475 aaKnown RBP18.26■□□□□ 0.51
NEK9-202ENST00000553823 EPRSP07814 1512 aaKnown RBP18.26■□□□□ 0.51
NEK9-202ENST00000553823 UACAQ9BZF9 1416 aa18.25■□□□□ 0.51
NEK9-202ENST00000553823 ARHGEF11O15085 1522 aa18.23■□□□□ 0.51
NEK9-202ENST00000553823 KANK4Q5T7N3 995 aaPredicted RBP18.23■□□□□ 0.51
NEK9-202ENST00000553823 PIAS4Q8N2W9 510 aaPredicted RBP18.23■□□□□ 0.51
NEK9-202ENST00000553823 ADRA2BP18089 450 aa18.22■□□□□ 0.51
NEK9-202ENST00000553823 LRRC9Q6ZRR7 1453 aa18.21■□□□□ 0.51
NEK9-202ENST00000553823 CDK13Q14004 1512 aaKnown RBP18.21■□□□□ 0.51
NEK9-202ENST00000553823 ABCC2Q92887 1545 aa18.21■□□□□ 0.51
NEK9-202ENST00000553823 ARID3CA6NKF2 412 aa18.2■□□□□ 0.5
NEK9-202ENST00000553823 UHRF1BP1LA0JNW5 1464 aa18.2■□□□□ 0.5
NEK9-202ENST00000553823 RIMBP3CA6NJZ7 1639 aa18.17■□□□□ 0.5
NEK9-202ENST00000553823 RIMBP3BA6NNM3 1639 aa18.17■□□□□ 0.5
NEK9-202ENST00000553823 RIMBP3Q9UFD9 1639 aa18.17■□□□□ 0.5
NEK9-202ENST00000553823 MTUS2Q5JR59 1369 aa18.17■□□□□ 0.5
NEK9-202ENST00000553823 ATP10BO94823 1461 aa18.16■□□□□ 0.5
NEK9-202ENST00000553823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.16■□□□□ 0.5
NEK9-202ENST00000553823 HNRNPUL2Q1KMD3 747 aaKnown RBP18.16■□□□□ 0.5
NEK9-202ENST00000553823 CDK11AQ9UQ88 783 aaPredicted RBP18.15■□□□□ 0.5
NEK9-202ENST00000553823 EHBP1L1Q8N3D4 1523 aa18.14■□□□□ 0.49
NEK9-202ENST00000553823 ADCY10Q96PN6 1610 aa18.13■□□□□ 0.49
NEK9-202ENST00000553823 MAGI3Q5TCQ9 1506 aa18.13■□□□□ 0.49
NEK9-202ENST00000553823 KDM5BQ9UGL1 1544 aa18.1■□□□□ 0.49
NEK9-202ENST00000553823 TRIM26Q12899 539 aaPredicted RBP18.1■□□□□ 0.49
NEK9-202ENST00000553823 SUPT6HQ7KZ85 1726 aaKnown RBP18.09■□□□□ 0.49
NEK9-202ENST00000553823 ZCCHC11Q5TAX3 1644 aaKnown RBP18.09■□□□□ 0.49
NEK9-202ENST00000553823 PLEKHD1A6NEE1 506 aa18.08■□□□□ 0.48
NEK9-202ENST00000553823 TROQ12816 1431 aaPredicted RBP18.07■□□□□ 0.48
NEK9-202ENST00000553823 CYB5RLQ6IPT4 315 aa18.05■□□□□ 0.48
NEK9-202ENST00000553823 NCOA2Q15596 1464 aa18.04■□□□□ 0.48
NEK9-202ENST00000553823 NPM1P06748 294 aaKnown RBP eCLIP18.02■□□□□ 0.48
NEK9-202ENST00000553823 PHLDB1Q86UU1 1377 aa18.02■□□□□ 0.47
NEK9-202ENST00000553823 KIF14Q15058 1648 aa17.99■□□□□ 0.47
NEK9-202ENST00000553823 PCGF6Q9BYE7 350 aa17.98■□□□□ 0.47
NEK9-202ENST00000553823 RRBP1Q9P2E9 1410 aaKnown RBP17.97■□□□□ 0.47
NEK9-202ENST00000553823 MYOM3Q5VTT5 1437 aa17.96■□□□□ 0.47
NEK9-202ENST00000553823 WDR7Q9Y4E6 1490 aa17.95■□□□□ 0.46
NEK9-202ENST00000553823 CCNB3Q8WWL7 1395 aa17.93■□□□□ 0.46
NEK9-202ENST00000553823 ASXL2Q76L83 1435 aa17.93■□□□□ 0.46
NEK9-202ENST00000553823 ABCC10Q5T3U5 1492 aa17.93■□□□□ 0.46
NEK9-202ENST00000553823 FGD6Q6ZV73 1430 aa17.92■□□□□ 0.46
NEK9-202ENST00000553823 KCNH8Q96L42 1107 aa17.91■□□□□ 0.46
NEK9-202ENST00000553823 ITSN2Q9NZM3 1697 aa17.9■□□□□ 0.46
NEK9-202ENST00000553823 CDC42BPAQ5VT25 1732 aa17.89■□□□□ 0.45
NEK9-202ENST00000553823 MIA2Q96PC5 1412 aa17.89■□□□□ 0.45
NEK9-202ENST00000553823 MAPKBP1O60336 1514 aa17.88■□□□□ 0.45
NEK9-202ENST00000553823 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.88■□□□□ 0.45
NEK9-202ENST00000553823 GPATCH8Q9UKJ3 1502 aaKnown RBP17.88■□□□□ 0.45
NEK9-202ENST00000553823 DNAJC5Q9H3Z4 198 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms