RNA–Protein interactions for RNA: ENST00000553458.5

ALDH6A1-202, Transcript of aldehyde dehydrogenase 6 family member A1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ALDH6A1, Length 5,499 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH6A1-202ENST00000553458 FAM50AQ14320 339 aaKnown RBP12.36□□□□□ -0.43
ALDH6A1-202ENST00000553458 SMARCA2P51531 1590 aa12.35□□□□□ -0.43
ALDH6A1-202ENST00000553458 PAK3O75914 559 aaPredicted RBP12.34□□□□□ -0.43
ALDH6A1-202ENST00000553458 GLIPR1L2Q4G1C9 344 aa12.33□□□□□ -0.44
ALDH6A1-202ENST00000553458 FANCIQ9NVI1 1328 aa12.32□□□□□ -0.44
ALDH6A1-202ENST00000553458 PPP4R2Q9NY27 417 aa12.3□□□□□ -0.44
ALDH6A1-202ENST00000553458 ARID4BQ4LE39 1312 aaPredicted RBP12.29□□□□□ -0.44
ALDH6A1-202ENST00000553458 ERICH6BQ5W0A0 696 aa12.29□□□□□ -0.44
ALDH6A1-202ENST00000553458 SIN3AQ96ST3 1273 aa12.28□□□□□ -0.44
ALDH6A1-202ENST00000553458 PKNOX2Q96KN3 472 aa12.25□□□□□ -0.45
ALDH6A1-202ENST00000553458 VSIG10Q8N0Z9 540 aa12.24□□□□□ -0.45
ALDH6A1-202ENST00000553458 BRPF3Q9ULD4 1205 aa12.23□□□□□ -0.45
ALDH6A1-202ENST00000553458 BAZ1BQ9UIG0 1483 aaKnown RBP12.23□□□□□ -0.45
ALDH6A1-202ENST00000553458 MRS2Q9HD23 443 aa12.21□□□□□ -0.45
ALDH6A1-202ENST00000553458 NAP1L5Q96NT1 182 aaPredicted RBP12.21□□□□□ -0.46
ALDH6A1-202ENST00000553458 IPO9Q96P70 1041 aaKnown RBP12.19□□□□□ -0.46
ALDH6A1-202ENST00000553458 CCDC88BA6NC98 1476 aa12.19□□□□□ -0.46
ALDH6A1-202ENST00000553458 UBE2Q2Q8WVN8 375 aa12.18□□□□□ -0.46
ALDH6A1-202ENST00000553458 SLC4A3P48751 1232 aa12.14□□□□□ -0.47
ALDH6A1-202ENST00000553458 ZNF326Q5BKZ1 582 aaKnown RBP12.12□□□□□ -0.47
ALDH6A1-202ENST00000553458 TONSLQ96HA7 1378 aa12.1□□□□□ -0.47
ALDH6A1-202ENST00000553458 PPM1GO15355 546 aaPredicted RBP12.1□□□□□ -0.47
ALDH6A1-202ENST00000553458 CLIP1P30622 1438 aa12.1□□□□□ -0.47
ALDH6A1-202ENST00000553458 SOGA1O94964 1423 aa12.1□□□□□ -0.47
ALDH6A1-202ENST00000553458 ATAD2BQ9ULI0 1458 aa12.09□□□□□ -0.47
ALDH6A1-202ENST00000553458 A0A0U1RQG5 324 aaPredicted RBP12.09□□□□□ -0.47
ALDH6A1-202ENST00000553458 DHX57Q6P158 1386 aaKnown RBP12.09□□□□□ -0.47
ALDH6A1-202ENST00000553458 TNIKQ9UKE5 1360 aa12.08□□□□□ -0.48
ALDH6A1-202ENST00000553458 CCER2I3L3R5 266 aa12.08□□□□□ -0.48
ALDH6A1-202ENST00000553458 ARID3AQ99856 593 aa12.07□□□□□ -0.48
ALDH6A1-202ENST00000553458 PODXL2Q9NZ53 605 aa12.05□□□□□ -0.48
ALDH6A1-202ENST00000553458 P3H3Q8IVL6 736 aa12.05□□□□□ -0.48
ALDH6A1-202ENST00000553458 ABCC8Q09428 1581 aa12.05□□□□□ -0.48
ALDH6A1-202ENST00000553458 HMGXB3Q12766 1538 aa12.04□□□□□ -0.48
ALDH6A1-202ENST00000553458 KANK4Q5T7N3 995 aaPredicted RBP12.03□□□□□ -0.48
ALDH6A1-202ENST00000553458 PRDM2Q13029 1718 aa12.03□□□□□ -0.48
ALDH6A1-202ENST00000553458 GSE1Q14687 1217 aa12.03□□□□□ -0.48
ALDH6A1-202ENST00000553458 SYNJ1O43426 1573 aa11.99□□□□□ -0.49
ALDH6A1-202ENST00000553458 PLEKHG5O94827 1062 aa11.99□□□□□ -0.49
ALDH6A1-202ENST00000553458 RSPH6AQ9H0K4 717 aa11.99□□□□□ -0.49
ALDH6A1-202ENST00000553458 FRAT1Q92837 279 aaPredicted RBP11.99□□□□□ -0.49
ALDH6A1-202ENST00000553458 HSP90AA2PQ14568 343 aaPredicted RBP11.99□□□□□ -0.49
ALDH6A1-202ENST00000553458 HSP90AA1P07900 732 aaKnown RBP11.98□□□□□ -0.49
ALDH6A1-202ENST00000553458 BIVM-ERCC5R4GMW8 1640 aa11.98□□□□□ -0.49
ALDH6A1-202ENST00000553458 AMER1Q5JTC6 1135 aaPredicted RBP11.98□□□□□ -0.49
ALDH6A1-202ENST00000553458 WRNQ14191 1432 aaPredicted RBP eCLIP11.97□□□□□ -0.49
ALDH6A1-202ENST00000553458 DDRGK1Q96HY6 314 aa11.97□□□□□ -0.49
ALDH6A1-202ENST00000553458 GZF1Q9H116 711 aaPredicted RBP11.96□□□□□ -0.49
ALDH6A1-202ENST00000553458 GOLGA3Q08378 1498 aa11.96□□□□□ -0.5
ALDH6A1-202ENST00000553458 RGS3P49796 1198 aa11.96□□□□□ -0.5
ALDH6A1-202ENST00000553458 NCAPD3P42695 1498 aa11.96□□□□□ -0.5
ALDH6A1-202ENST00000553458 TMC1Q8TDI8 760 aa11.95□□□□□ -0.5
ALDH6A1-202ENST00000553458 PNNQ9H307 717 aaKnown RBP11.94□□□□□ -0.5
ALDH6A1-202ENST00000553458 SPRYD3Q8NCJ5 442 aa11.94□□□□□ -0.5
ALDH6A1-202ENST00000553458 ZMYND15Q9H091 742 aa11.94□□□□□ -0.5
ALDH6A1-202ENST00000553458 PPP1R15AO75807 674 aaPredicted RBP11.94□□□□□ -0.5
ALDH6A1-202ENST00000553458 PDE4AP27815 886 aa11.93□□□□□ -0.5
ALDH6A1-202ENST00000553458 SLKQ9H2G2 1235 aaPredicted RBP11.92□□□□□ -0.5
ALDH6A1-202ENST00000553458 NFKBIBQ15653 356 aa11.92□□□□□ -0.5
ALDH6A1-202ENST00000553458 RUSC2Q8N2Y8 1516 aa11.91□□□□□ -0.5
ALDH6A1-202ENST00000553458 RAB3GAP2Q9H2M9 1393 aa11.91□□□□□ -0.5
ALDH6A1-202ENST00000553458 CCDC184Q52MB2 194 aa11.91□□□□□ -0.5
ALDH6A1-202ENST00000553458 USP35Q9P2H5 1018 aa11.9□□□□□ -0.5
ALDH6A1-202ENST00000553458 TOP2BQ02880 1626 aa11.9□□□□□ -0.5
ALDH6A1-202ENST00000553458 SKAP1Q86WV1 359 aa11.89□□□□□ -0.51
ALDH6A1-202ENST00000553458 EIF4G2P78344 907 aaKnown RBP eCLIP11.89□□□□□ -0.51
ALDH6A1-202ENST00000553458 CHIC2Q9UKJ5 165 aa11.89□□□□□ -0.51
ALDH6A1-202ENST00000553458 ZBTB7CA1YPR0 619 aa11.87□□□□□ -0.51
ALDH6A1-202ENST00000553458 HSPA5P11021 654 aaKnown RBP11.87□□□□□ -0.51
ALDH6A1-202ENST00000553458 TRIM44Q96DX7 344 aaPredicted RBP11.87□□□□□ -0.51
ALDH6A1-202ENST00000553458 EXOC6Q8TAG9 804 aa11.87□□□□□ -0.51
ALDH6A1-202ENST00000553458 PABPN1Q86U42 306 aaKnown RBP eCLIP11.87□□□□□ -0.51
ALDH6A1-202ENST00000553458 CCNB3Q8WWL7 1395 aa11.86□□□□□ -0.51
ALDH6A1-202ENST00000553458 FRAT2O75474 233 aaPredicted RBP11.85□□□□□ -0.51
ALDH6A1-202ENST00000553458 VPS8Q8N3P4 1428 aa11.85□□□□□ -0.51
ALDH6A1-202ENST00000553458 KIF21BO75037 1637 aa11.84□□□□□ -0.51
ALDH6A1-202ENST00000553458 ARID3CA6NKF2 412 aa11.83□□□□□ -0.52
ALDH6A1-202ENST00000553458 TCERG1O14776 1098 aaKnown RBP11.83□□□□□ -0.52
ALDH6A1-202ENST00000553458 AKNAQ7Z591 1439 aa11.83□□□□□ -0.52
ALDH6A1-202ENST00000553458 PLIN1O60240 522 aa11.83□□□□□ -0.52
ALDH6A1-202ENST00000553458 CANXP27824 592 aaKnown RBP11.82□□□□□ -0.52
ALDH6A1-202ENST00000553458 NUDCQ9Y266 331 aa11.81□□□□□ -0.52
ALDH6A1-202ENST00000553458 RRP7BPQ9NSQ0 103 aa11.8□□□□□ -0.52
ALDH6A1-202ENST00000553458 C11orf95C9JLR9 678 aaPredicted RBP11.79□□□□□ -0.52
ALDH6A1-202ENST00000553458 CFTRP13569 1480 aa11.79□□□□□ -0.52
ALDH6A1-202ENST00000553458 EEA1Q15075 1411 aa11.77□□□□□ -0.53
ALDH6A1-202ENST00000553458 CUX1P39880 1505 aa11.77□□□□□ -0.53
ALDH6A1-202ENST00000553458 FAM43AQ8N2R8 423 aa11.77□□□□□ -0.53
ALDH6A1-202ENST00000553458 L1TD1Q5T7N2 865 aaKnown RBP11.76□□□□□ -0.53
ALDH6A1-202ENST00000553458 ANP32BQ92688 251 aaKnown RBP11.76□□□□□ -0.53
ALDH6A1-202ENST00000553458 ZBED9Q6R2W3 1325 aa11.76□□□□□ -0.53
ALDH6A1-202ENST00000553458 FOXD1Q16676 465 aa11.75□□□□□ -0.53
ALDH6A1-202ENST00000553458 CEP164Q9UPV0 1460 aa11.75□□□□□ -0.53
ALDH6A1-202ENST00000553458 SETD5Q9C0A6 1442 aa11.75□□□□□ -0.53
ALDH6A1-202ENST00000553458 UPF2Q9HAU5 1272 aaKnown RBP11.75□□□□□ -0.53
ALDH6A1-202ENST00000553458 BECN1Q14457 450 aa11.75□□□□□ -0.53
ALDH6A1-202ENST00000553458 PRKRIP1Q9H875 184 aaPredicted RBP11.75□□□□□ -0.53
ALDH6A1-202ENST00000553458 RCAN3Q9UKA8 241 aa11.75□□□□□ -0.53
ALDH6A1-202ENST00000553458 WDR97A6NE52 1622 aa11.74□□□□□ -0.53
ALDH6A1-202ENST00000553458 GOLGA6L3A6NEY3 463 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms